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Bug 921490 - app-text/calibre-6.29.0: fails tests because of a bug in dev-db/sqlite
Summary: app-text/calibre-6.29.0: fails tests because of a bug in dev-db/sqlite
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Zac Medico
URL: https://www.sqlite.org/forum/forumpos...
Whiteboard:
Keywords: TESTFAILURE
Depends on:
Blocks:
 
Reported: 2024-01-06 09:58 UTC by Joonas Niilola
Modified: 2024-03-06 01:16 UTC (History)
4 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
calibre-6.29.0:20240106-095011.log (calibre-6.29.0:20240106-095011.log,92.56 KB, text/plain)
2024-01-06 09:58 UTC, Joonas Niilola
Details

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Description Joonas Niilola gentoo-dev 2024-01-06 09:58:06 UTC
Portage 3.0.59 (python 3.11.7-final-0, default/linux/amd64/17.1/desktop/plasma, gcc-13, glibc-2.37-r7, 6.1.67-gentoo x86_64)
=================================================================
System uname: Linux-6.1.67-gentoo-x86_64-AMD_Ryzen_9_5950X_16-Core_Processor-with-glibc2.37
KiB Mem:   131792096 total, 129235540 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Sat, 06 Jan 2024 06:32:57 +0000
Head commit of repository gentoo: 5d354b450b8df423239105f8c971418aa6f9d466

sh bash 5.1_p16-r6
ld GNU ld (Gentoo 2.41 p2) 2.41.0
app-misc/pax-utils:        1.3.5::gentoo
app-shells/bash:           5.1_p16-r6::gentoo
dev-lang/perl:             5.38.2-r1::gentoo
dev-lang/python:           3.11.7::gentoo
dev-util/cmake:            3.27.9::gentoo
dev-util/meson:            1.3.0-r2::gentoo
sys-apps/baselayout:       2.14-r1::gentoo
sys-apps/openrc:           0.48::gentoo
sys-apps/sandbox:          2.38::gentoo
sys-devel/autoconf:        2.71-r6::gentoo
sys-devel/automake:        1.16.5-r1::gentoo
sys-devel/binutils:        2.41-r2::gentoo
sys-devel/binutils-config: 5.5::gentoo
sys-devel/gcc:             13.2.1_p20230826::gentoo
sys-devel/gcc-config:      2.11::gentoo
sys-devel/libtool:         2.4.7-r1::gentoo
sys-devel/llvm:            16.0.6::gentoo
sys-devel/make:            4.4.1-r1::gentoo
sys-kernel/linux-headers:  6.1::gentoo (virtual/os-headers)
sys-libs/glibc:            2.37-r7::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/gentoo
    priority: -1000
    volatile: False

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/var/cache/distfiles"
EMERGE_DEFAULT_OPTS="--autounmask=y --autounmask-continue --autounmask-use=y --autounmask-write --binpkg-changed-deps=y --buildpkg-exclude virtual/* --buildpkg-exclude acct-* --buildpkg-exclude sys-kernel/* --complete-graph --nospinner --jobs=12 --usepkg"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME"
FCFLAGS="-march=native -O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch parallel-install pid-sandbox pkgdir-index-trusted preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=native -O2 -pipe"
GENTOO_MIRRORS="https://distfiles.gentoo.org"
LANG="C.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LEX="flex"
LINGUAS=" en en_US en-US fi sv "
MAKEOPTS="-j32"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi activities alsa amd64 bluetooth branding bzip2 cairo cdda cdr cli crypt cups dbus declarative dri dts dvd dvdr elogind encode exif flac fortran gdbm gif gpm gtk gui iconv icu ipv6 jpeg kde kwallet lcms libnotify libtirpc mad mng mp3 mp4 mpeg multilib ncurses networkmanager nptl ogg opengl openmp openrc pam pango pcre pdf pipewire plasma png policykit ppds pulseaudio qml qt5 readline screencast sdl seccomp semantic-desktop sound spell split-usr ssl startup-notification svg test-rust tiff truetype udev udisks unicode upower usb vorbis vulkan wayland widgets wxwidgets x264 xattr xcb xft xml xv xvid zlib" ABI_X86="64 32" ADA_TARGET="gnat_2021" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_anon authn_dbm authn_file authz_dbm authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir env expires ext_filter file_cache filter headers include info log_config logio mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 f16c fma3 mmx mmxext pclmul popcnt rdrand sha sse sse2 sse3 sse4_1 sse4_2 sse4a ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 ntrip navcom oceanserver oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 tsip tripmate tnt ublox" INPUT_DEVICES="evdev" KERNEL="linux" L10N="en en_US en-US fi sv" LCD_DEVICES="bayrad cfontz glk hd44780 lb216 lcdm001 mtxorb text" LLVM_TARGETS="BPF NVPTX" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php8-1" POSTGRES_TARGETS="postgres15" PYTHON_SINGLE_TARGET="python3_11" PYTHON_TARGETS="python3_11" RUBY_TARGETS="ruby31" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipp2p iface geoip fuzzy condition tarpit sysrq proto logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LFLAGS, LIBTOOL, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PYTHONPATH, RANLIB, READELF, RUSTFLAGS, SHELL, SIZE, STRINGS, STRIP, YACC, YFLAGS
Comment 1 Joonas Niilola gentoo-dev 2024-01-06 09:58:21 UTC
Created attachment 881553 [details]
calibre-6.29.0:20240106-095011.log
Comment 2 Eli Schwartz gentoo-dev 2024-01-07 04:24:39 UTC
It passed locally when I originally ran it... it doesn't pass anymore. :)

https://github.com/kovidgoyal/calibre/commit/0a23fabd5b4bff152047ba0cffbc2b67592645d1

And again:

https://github.com/kovidgoyal/calibre/commit/3349979551db05ec0c8754d7ea5a4e57a97f8a0a

And again:

https://github.com/kovidgoyal/calibre/commit/da82b673f09efbe9cdcc1e0900f0a9f04d8de052

The tl;dr is that sqlite has a bug and made a bugfix, but apparently do not believe in fixing bugs in bugfix releases. It will be "fixed in 3.45.0", so that's... good? Eventually?

For the version of sqlite that Gentoo packages, calibre 7.2.0 will pass the tests and older versions would require one of:

- backporting that suppression in order to skip it

- backporting the sqlite bugfix
Comment 3 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2024-01-07 07:45:50 UTC
(CCing dev-db/sqlite maintainers accordingly.)
Comment 4 Larry the Git Cow gentoo-dev 2024-01-07 08:12:48 UTC
The bug has been referenced in the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b28a551a4511cb0861ed6204556cb507822fbedb

commit b28a551a4511cb0861ed6204556cb507822fbedb
Author:     Sam James <sam@gentoo.org>
AuthorDate: 2024-01-07 08:12:27 +0000
Commit:     Sam James <sam@gentoo.org>
CommitDate: 2024-01-07 08:12:40 +0000

    dev-db/sqlite: backport FTS regression fix for app-text/calibre
    
    Bug: https://bugs.gentoo.org/921490
    Signed-off-by: Sam James <sam@gentoo.org>

 .../files/sqlite-3.44.2-fts-regression.patch       | 125 ++++++
 dev-db/sqlite/sqlite-3.44.2-r2.ebuild              | 434 +++++++++++++++++++++
 2 files changed, 559 insertions(+)
Comment 5 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2024-01-07 08:13:11 UTC
I leave it to the calibre maintainers to decide if they want to depend on a newer version of SQLite or not.
Comment 6 Eli Schwartz gentoo-dev 2024-03-06 01:16:05 UTC
I think we're good here.

(We don't actually directly depend on sqlite anyway.)