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Bug 901345 - [guru] sci-biology/cmdock-0.2.0 fails to compile: cmzip.cxx:583:43: error: expected unqualified-id before & token
Summary: [guru] sci-biology/cmdock-0.2.0 fails to compile: cmzip.cxx:583:43: error: ex...
Status: RESOLVED FIXED
Alias: None
Product: GURU
Classification: Unclassified
Component: Package issues (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: GURU project
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2023-03-15 12:56 UTC by Agostino Sarubbo
Modified: 2024-01-09 12:03 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---

Attachments
build.log (build.log,278.82 KB, text/plain)
2023-03-15 12:56 UTC, Agostino Sarubbo 		Details
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Description Agostino Sarubbo gentoo-dev 2023-03-15 12:56:28 UTC 
https://blogs.gentoo.org/ago/2020/07/04/gentoo-tinderbox/

Issue: sci-biology/cmdock-0.2.0 fails to compile.
Discovered on: amd64 (internal ref: guru_tinderbox)
Comment 1 Agostino Sarubbo gentoo-dev 2023-03-15 12:56:30 UTC 
Created attachment 857843 [details]
build.log

build log and emerge --info
Comment 2 Agostino Sarubbo gentoo-dev 2023-03-15 12:56:31 UTC 
Error(s) that match a know pattern in addition to what has been reported in the summary:


FAILED: cmcavity.p/src_exe_cmcavity.cxx.o 
FAILED: cmdock.p/src_exe_cmdock.cxx.o 
FAILED: cmmoegrid.p/src_exe_cmmoegrid.cxx.o 
FAILED: cmzip.p/src_exe_cmzip.cxx.o 
Run-time dependency dt_smarts found: NO (tried pkgconfig and cmake)
Run-time dependency dt_smiles found: NO (tried pkgconfig and cmake)
../cmdock-v0.2.0/src/exe/cmzip.cxx:583:43: error: expected unqualified-id before ‘&’ token
Comment 3 Anna Vyalkova 2023-06-17 11:45:26 UTC 
That's incompatibility with cxxopts 3.0. Fixed upstream, waiting for new release...
Comment 4 Larry the Git Cow gentoo-dev 2024-01-09 12:03:24 UTC 
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=bf5dd7c748cd41b6fa540780d668045d1836db0b

commit bf5dd7c748cd41b6fa540780d668045d1836db0b
Author:     Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
AuthorDate: 2024-01-09 10:19:33 +0000
Commit:     Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
CommitDate: 2024-01-09 10:19:50 +0000

    sci-biology/cmdock: fix build
    
    Closes: https://bugs.gentoo.org/901345
    Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>

 sci-biology/cmdock/cmdock-0.2.0-r1.ebuild          | 119 ++++++++++++++++++++
 .../cmdock/files/cmdock-0.2.0-cxxopts.patch        | 122 +++++++++++++++++++++
 .../cmdock/files/cmdock-0.2.0-include.patch        |  19 ++++
 3 files changed, 260 insertions(+)