from /usr/include/qt5/QtCore/qfiledevice.h:43, from /usr/include/qt5/QtCore/qfile.h:44, from /usr/include/qt5/QtCore/QFile:1, from /var/tmp/portage/sci-visualization/kst-2.0.8-r2/work/Kst-2.0.8/src/plugins/dataobject/bin/bin.h:18, from /var/tmp/portage/sci-visualization/kst-2.0.8-r2/work/Kst-2.0.8/src/plugins/dataobject/bin/bin.cpp:17: /usr/include/gsl/algorithm: In function void gsl::copy(span<ElementType, FirstExtent>, span<DestElementType, DestExtent>): /usr/include/gsl/algorithm:54:10: error: copy_n is not a member of std; did you mean copy? 54 | std::copy_n(src.data(), src.size(), dest.data()); | ^~~~~~ ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1_desktop_systemd-j4-20221203-111136 ------------------------------------------------------------------- GNUMAKEFLAGS="$GNUMAKEFLAGS --shuffle" gcc-config -l: [1] x86_64-pc-linux-gnu-11 [2] x86_64-pc-linux-gnu-12 * clang/llvm (if any): clang version 15.0.6 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/15/bin Configuration file: /etc/clang/clang.cfg /usr/lib/llvm/15 15.0.6 Python 3.10.8 Available Rust versions: [1] rust-bin-1.65.0 * The following VMs are available for generation-2: 1) Eclipse Temurin JDK 11.0.17_p8 [openjdk-bin-11] *) Eclipse Temurin JDK 17.0.5_p8 [openjdk-bin-17] 3) Eclipse Temurin JDK 8.352_p08 [openjdk-bin-8] Available Java Virtual Machines: [1] openjdk-bin-8 [2] openjdk-bin-11 [3] openjdk-bin-17 system-vm The Glorious Glasgow Haskell Compilation System, version 9.0.2 php cli (if any): HEAD of ::gentoo commit 91987b3c31366940194123752f36cea3c5e71653 Author: Repository mirror & CI <repomirrorci@gentoo.org> Date: Tue Dec 6 19:46:51 2022 +0000 2022-12-06 19:46:50 UTC emerge -qpvO sci-visualization/kst [ebuild N ] sci-visualization/kst-2.0.8-r2 USE="-debug -test"
Created attachment 840545 [details] emerge-info.txt
Created attachment 840547 [details] emerge-history.txt.bz2
Created attachment 840549 [details] environment
Created attachment 840551 [details] etc.clang.tar.bz2
Created attachment 840553 [details] etc.portage.tar.bz2
Created attachment 840555 [details] logs.tar.bz2
Created attachment 840557 [details] sci-visualization:kst-2.0.8-r2:20221206-201531.log.bz2
Created attachment 840559 [details] temp.tar.bz2
works for me: # emerge sci-visualization/kst -pvq [ebuild R ] sci-visualization/kst-2.0.8-r2 USE="-debug -test"
Reproduced. its sci-libs/gsl + dev-cpp/ms-gsl. Build uses header location for gsl -- Found Gsl: -- includes : /usr/include/gsl/;/usr/include/gsl//.. But ms-gsl has installed its own header there. $ qfile /usr/include/gsl/algorithm dev-cpp/ms-gsl: /usr/include/gsl/algorithm Leading to the failure when its mistakenly preferred over the standard libraries <algorithm>. /usr/include/gsl/algorithm: In function ‘void gsl::copy(span<ElementType, FirstExtent>, span<DestElementType, DestExtent>)’: /usr/include/gsl/algorithm:54:10: error: ‘copy_n’ is not a member of ‘std’; did you mean ‘copy’? 54 | std::copy_n(src.data(), src.size(), dest.data()); | ^~~~~~ | copy
A said in the blocker bug: I currently do not see myself patching every consumer of dev-cpp/ms-gsl to use an alternative include path. Both upstream projects use the same directory, so it really is an issue which both upstream would need to resolve.
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=dfd4fdec02bc89e05b417bc768ee249e41a10985 commit dfd4fdec02bc89e05b417bc768ee249e41a10985 Author: Andreas Sturmlechner <asturm@gentoo.org> AuthorDate: 2025-04-15 21:54:42 +0000 Commit: Andreas Sturmlechner <asturm@gentoo.org> CommitDate: 2025-04-15 22:06:06 +0000 sci-visualization/kst: add 2.1.0_p20250415 Closes: https://bugs.gentoo.org/884625 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org> sci-visualization/kst/Manifest | 1 + .../files/kst-2.1.0_p20250415-cmake-findgsl.patch | 119 +++++++++++++++++++++ .../kst/files/kst-2.1.0_p20250415-cmake4.patch | 83 ++++++++++++++ .../kst/files/kst-2.1.0_p20250415-hdf5cxx.patch | 20 ++++ sci-visualization/kst/kst-2.1.0_p20250415.ebuild | 82 ++++++++++++++ sci-visualization/kst/metadata.xml | 4 +- 6 files changed, 307 insertions(+), 2 deletions(-)
