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Bug 883375 - media-libs/opencv-4.6.0-r2: fails during src_install during removal of non-existent directory
Summary: media-libs/opencv-4.6.0-r2: fails during src_install during removal of non-e...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: AMD64 Linux
: Normal normal (vote)
Assignee: Paul Zander
URL:
Whiteboard:
Keywords:
: 905835 (view as bug list)
Depends on:
Blocks:
 
Reported: 2022-11-28 01:42 UTC by LordOfForever
Modified: 2024-01-10 12:33 UTC (History)
3 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
opencv ebuild that installs (opencv-4.6.0-r4.ebuild,20.83 KB, text/plain)
2023-02-16 05:41 UTC, Alec Ari
Details

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Description LordOfForever 2022-11-28 01:42:20 UTC
During the install phase, after successfully compiling, the ebuild attempts to delete the following directory: '/var/tmp/portage/media-libs/opencv-4.6.0-r2/work/opencv-4.6.0_build-abi_amd64/modules/python3'-- which does not exist.

A temporary solution I found is to just manually cd into 'modules' and create an empty 'python3' directory while the package is being compiled. This will allow the ebuild to succesfully install.

But the workaround has to be repeated every time media-libs/opencv has to be re-emerged for some reason.

The failing command of the ebuild script is: "rm -r modules/python3".
I believe the solution would just be to remove the aforementioned command from the ebuild script.



Below is the full output of 'emerge --info':



emerge --info media-libs/opencv
Portage 3.0.39 (python 3.10.8-final-0, default/linux/amd64/17.1/desktop/plasma/systemd, gcc-12, glibc-2.36-r6, 6.0.10-gentoo-x86_64 x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-6.0.10-gentoo-x86_64-x86_64-11th_Gen_Intel-R-_Core-TM-_i5-11400_@_2.60GHz-with-glibc2.36
KiB Mem:    32735816 total,  25460292 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Sun, 27 Nov 2022 20:30:01 +0000
Head commit of repository gentoo: 4cca97c003a0e5515369f8372d6ea6b3320ff795
sh bash 5.2_p12
ld GNU ld (Gentoo 2.39 p5) 2.39.0
app-misc/pax-utils:        1.3.5::gentoo
app-shells/bash:           5.2_p12::gentoo
dev-lang/perl:             5.36.0-r1::gentoo
dev-lang/python:           3.10.8_p3::gentoo, 3.11.0_p2::gentoo
dev-lang/rust:             1.65.0::gentoo
dev-util/cmake:            3.25.0::gentoo
dev-util/meson:            0.64.1::gentoo
sys-apps/baselayout:       2.9::gentoo
sys-apps/sandbox:          2.29::gentoo
sys-apps/systemd:          252.2::gentoo
sys-devel/autoconf:        2.13-r7::gentoo, 2.71-r5::gentoo
sys-devel/automake:        1.16.5::gentoo
sys-devel/binutils:        2.39-r4::gentoo
sys-devel/binutils-config: 5.4.1::gentoo
sys-devel/clang:           15.0.5::gentoo
sys-devel/gcc:             12.2.1_p20221008::gentoo
sys-devel/gcc-config:      2.8::gentoo
sys-devel/libtool:         2.4.7::gentoo
sys-devel/lld:             15.0.5::gentoo
sys-devel/llvm:            15.0.5::gentoo
sys-devel/make:            4.4::gentoo
sys-kernel/linux-headers:  6.0::gentoo (virtual/os-headers)
sys-libs/glibc:            2.36-r6::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-extra-opts: 
    sync-rsync-verify-jobs: 1
    sync-rsync-verify-max-age: 24
    sync-rsync-verify-metamanifest: yes

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=rocketlake -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=rocketlake -O2 -pipe"
DISTDIR="/var/cache/distfiles"
EMERGE_DEFAULT_OPTS="--jobs 12 --load-average=12"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME"
FCFLAGS="-march=rocketlake -O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=rocketlake -O2 -pipe"
GENTOO_MIRRORS="https://gentoo.c3sl.ufpr.br/ http://gentoo.c3sl.ufpr.br/ rsync://gentoo.c3sl.ufpr.br/gentoo/"
LANG="pt_BR.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j12"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/bash"
USE="X a52 aac acl acpi activities alsa amd64 bindist bluetooth branding bzip2 cairo cdda cdr cli crypt cups dbus declarative discover dri dts dvd dvdr encode exif ffmpeg flac fortran gdbm gif gmp-autoupdate gpm grub gui iconv icu initramfs ipv6 jack jpeg kde kwallet lcms libglvnd libnotify libtirpc mad mng mp3 mp4 mpeg multilib ncurses nls nptl ogg opengl openmp pam pango pcre pdf pipewire pipewire-alsa plasma png policykit ppds pulseaudio qml qt5 readline sdl seccomp semantic-desktop sound-server spell split-usr ssl startup-notification svg symlink systemd test-rust tiff truetype udev udisks unicode upower usb vorbis widgets wxwidgets x264 xattr xcb xml xv xvid zlib" ABI_X86="64" ADA_TARGET="gnat_2021" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="libinput" KERNEL="linux" L10N="pt-BR" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-4 php8-0" POSTGRES_TARGETS="postgres12 postgres13" PYTHON_SINGLE_TARGET="python3_10" PYTHON_TARGETS="python3_10" RUBY_TARGETS="ruby27" USERLAND="GNU" VIDEO_CARDS="amdgpu radeonsi intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LEX, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS

=================================================================
                        Package Settings
=================================================================

media-libs/opencv-4.6.0-r2::gentoo was built with the following:
USE="contrib contribdnn eigen features2d ffmpeg jpeg opengl openmp png python qt5 tiff -contribcvv -contribfreetype -contribhdf (-contribovis) -contribsfm -contribxfeatures2d -cuda -debug -dnnsamples -download -examples -gdal -gflags -glog -gphoto2 -gstreamer -gtk3 -ieee1394 -java -jpeg2k -lapack -lto -opencl -opencvapps -openexr -tesseract -testprograms -threads -v4l -vaapi -vtk -webp -xine" ABI_X86="(64) -32 (-x32)" CPU_FLAGS_X86="sse sse2 -avx -avx2 -avx512f -f16c -fma3 -popcnt -sse3 -sse4_1 -sse4_2 -ssse3" PYTHON_TARGETS="python3_10 -python3_11 -python3_8 -python3_9"
Comment 1 LordOfForever 2022-11-28 01:46:04 UTC
Note: I was only able to merge the package after doing the workaround I've mentioned.
Comment 2 Ionen Wolkens gentoo-dev 2022-11-28 01:48:55 UTC
build.log? probably a duplicate of bug #882411, but can't tell if cause is the same without the log
Comment 3 LordOfForever 2022-11-28 01:55:47 UTC
(In reply to Ionen Wolkens from comment #2)
> build.log? probably a duplicate of bug #882411, but can't tell if cause is
> the same without the log

Sorry I don't have portage's logging option enabled.
Where do I find the file you are asking?
Comment 4 immolo 2022-11-28 02:30:15 UTC
(In reply to LordOfForever from comment #3)
> (In reply to Ionen Wolkens from comment #2)
> > build.log? probably a duplicate of bug #882411, but can't tell if cause is
> > the same without the log
> 
> Sorry I don't have portage's logging option enabled.
> Where do I find the file you are asking?

FEATURES="keeptemp" emerge -va media-libs/opencv
Comment 5 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2022-11-28 02:36:50 UTC
Or just merge it again without the workaround.
Comment 6 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2022-11-28 02:41:49 UTC
(In reply to Ionen Wolkens from comment #2)
> build.log? probably a duplicate of bug #882411, but can't tell if cause is
> the same without the log

I guess didn't benefit from eclass change (can't check why not right now), may be worth masking the bad version(s) of setuptools to prevent more of these (as people with them installed get a message at least)
Comment 7 Ionen Wolkens gentoo-dev 2022-11-28 03:12:59 UTC
(In reply to Sam James from comment #6)
> I guess didn't benefit from eclass change (can't check why not right now),
> may be worth masking the bad version(s) of setuptools to prevent more of
> these (as people with them installed get a message at least)
Yeah this is ~arch and it changes nothing there given 65.6.0 is a bad version and eclass does >=65.5.1. To do it through eclass, while keeping current stable, would need something like:

|| ( ( >=65.5.1 <65.6 ) >=65.6.1 )

...but that won't help opencv either way given it doesn't use distutils-r1, and setuptools is being indirectly used through numpy.
Comment 8 Ionen Wolkens gentoo-dev 2022-11-28 03:42:23 UTC
(In reply to Ionen Wolkens from comment #7)
> || ( ( >=65.5.1 <65.6 ) >=65.6.1 )
Or from a quick look at changelogs, I guess need >=65.6.3? I didn't really follow this whole thing and what's affected.
Comment 9 Alec Ari 2023-02-16 05:40:04 UTC
I added `mkdir -p modules/python3` above `rm -r modules/python3 || die "rm failed"` in the opencv ebuild, and this fixed it for me.

My overlay with the patched OpenCV:

https://github.com/NTULINUX/ntu_overlay/tree/main/media-libs/opencv
Comment 10 Alec Ari 2023-02-16 05:41:21 UTC
Created attachment 851506 [details]
opencv ebuild that installs

This is probably not the right way to fix it, but I needed it fixed so I just did a quick `mkdir` hack.
Comment 11 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2023-02-16 05:43:02 UTC
(In reply to Alec Ari from comment #10)
> Created attachment 851506 [details]
> opencv ebuild that installs
> 
> This is probably not the right way to fix it, but I needed it fixed so I
> just did a quick `mkdir` hack.

The right way to fix it is to emerge -v1 setuptools as a one-off, no?
Comment 12 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2023-05-09 13:00:27 UTC
*** Bug 905835 has been marked as a duplicate of this bug. ***
Comment 13 Larry the Git Cow gentoo-dev 2024-01-10 12:33:57 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0e9205edb9922309ecd568b7085fd59726c7d2ca

commit 0e9205edb9922309ecd568b7085fd59726c7d2ca
Author:     Paul Zander <negril.nx+gentoo@gmail.com>
AuthorDate: 2023-12-08 14:58:23 +0000
Commit:     Sam James <sam@gentoo.org>
CommitDate: 2024-01-10 12:32:37 +0000

    media-libs/opencv: add 4.8.1-r1
    
    Closes: https://bugs.gentoo.org/702258
    Closes: https://bugs.gentoo.org/830294
    Closes: https://bugs.gentoo.org/883375
    Closes: https://bugs.gentoo.org/913740
    Closes: https://bugs.gentoo.org/914922
    Closes: https://bugs.gentoo.org/917121
    Signed-off-by: Paul Zander <negril.nx+gentoo@gmail.com>
    Signed-off-by: Sam James <sam@gentoo.org>

 media-libs/opencv/Manifest                         |   7 +
 .../files/opencv-4.8.1-ade-0.1.2a.tar.gz.patch     |  18 +
 .../opencv-4.8.1-drop-python2-detection.patch      |  23 +
 ...ncv-4.8.1-eliminate-lto-compiler-warnings.patch |  36 ++
 .../opencv/files/opencv-4.8.1-libpng16.patch       |  58 ++
 .../opencv/files/opencv-4.8.1-opencv_test.patch    |  18 +
 .../files/opencv-4.8.1-python3_12-support.patch    |  25 +
 .../opencv-4.8.1-use-system-flatbuffers.patch      |  36 ++
 .../files/opencv-4.8.1-use-system-opencl.patch     |  25 +
 ...rib-4.8.1-NVIDIAOpticalFlowSDK-2.0.tar.gz.patch |  20 +
 .../opencv/files/opencv_contrib-4.8.1-rgbd.patch   |  15 +
 media-libs/opencv/metadata.xml                     |  34 +-
 media-libs/opencv/opencv-4.8.1-r1.ebuild           | 644 +++++++++++++++++++++
 13 files changed, 945 insertions(+), 14 deletions(-)