bundled extension cdd ... ok (0.94m @ /usr) bundled extension flint ... ok (ok (2.9.0 @ /usr)) bundled extension libnormaliz ... failed ERROR: The bundled extension libnormaliz was explicitly requested but failed to configure. Please recheck your argument (--with-libnormaliz=/usr) and build/bundled.log . ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1-j4-20221125-160004 ------------------------------------------------------------------- GNUMAKEFLAGS="$GNUMAKEFLAGS --jobserver-style=pipe" GNUMAKEFLAGS="$GNUMAKEFLAGS --shuffle" CC=clang CXX=clang++ gcc-config -l: [1] x86_64-pc-linux-gnu-12 * clang/llvm (if any): clang version 15.0.5 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/15/bin Configuration file: /etc/clang/clang.cfg /usr/lib/llvm/15 15.0.5 Python 3.10.8 Available Ruby profiles: [1] ruby27 (with Rubygems) [2] ruby31 (with Rubygems) * Available Rust versions: [1] rust-bin-1.65.0 * The Glorious Glasgow Haskell Compilation System, version 9.0.2 php cli (if any): [1] php7.4 [2] php8.0 [3] php8.1 * HEAD of ::gentoo commit ad9c0722119ba139db51436ef285c679c558b422 Author: Repository mirror & CI <repomirrorci@gentoo.org> Date: Sat Nov 26 12:48:55 2022 +0000 2022-11-26 12:48:54 UTC emerge -qpvO sci-mathematics/polymake [ebuild N ] sci-mathematics/polymake-4.7 USE="cdd flint nauty normaliz -bliss -libpolymake -lrs -ppl -singular"
Created attachment 837131 [details] emerge-info.txt
Created attachment 837133 [details] emerge-history.txt
Created attachment 837135 [details] environment
Created attachment 837137 [details] etc.clang.tar.bz2
Created attachment 837139 [details] etc.portage.tar.bz2
Created attachment 837141 [details] logs.tar.bz2
Created attachment 837143 [details] sci-mathematics:polymake-4.7:20221126-132703.log
Created attachment 837145 [details] temp.tar.bz2
Probably failed inside the perl nightmare "configure" script from increased compiler strictness.
My first guess was wrong, but I'm not sure what happened here: /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_end_single' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_for_static_init_8' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `omp_get_ancestor_thread_num' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `omp_get_thread_num' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_barrier' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `omp_get_level' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_for_static_init_4u' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_end_reduce_nowait' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `omp_set_max_active_levels' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_critical' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_serialized_parallel' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_end_critical' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_for_static_init_8u' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `omp_in_parallel' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_push_num_threads' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_dispatch_init_8u' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_reduce_nowait' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `omp_get_max_threads' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_for_static_init_4' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_end_serialized_parallel' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_flush' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_single' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_dispatch_next_8u' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `omp_set_num_threads' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_global_thread_num' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_fork_call' /usr/bin/x86_64-pc-linux-gnu-ld.bfd: /usr/lib64/libnormaliz.so: undefined reference to `__kmpc_for_static_fini' clang-15: error: linker command failed with exit code 1 (use -v to see invocation)
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=152ef9448562ed6e385380fa31bc647bc78311ce commit 152ef9448562ed6e385380fa31bc647bc78311ce Author: Jakov Smolić <jsmolic@gentoo.org> AuthorDate: 2023-09-23 00:56:44 +0000 Commit: Jakov Smolić <jsmolic@gentoo.org> CommitDate: 2023-09-23 00:56:44 +0000 sci-mathematics/polymake: treeclean Closes: https://bugs.gentoo.org/909570 Closes: https://bugs.gentoo.org/883153 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org> profiles/arch/powerpc/ppc32/package.use.mask | 4 - profiles/arch/x86/package.use.mask | 8 -- profiles/package.mask | 5 - sci-mathematics/polymake/Manifest | 2 - .../polymake/files/polymake-4.6-perl-5.36.patch | 15 --- sci-mathematics/polymake/metadata.xml | 55 --------- sci-mathematics/polymake/polymake-4.6-r1.ebuild | 124 --------------------- sci-mathematics/polymake/polymake-4.9.ebuild | 122 -------------------- 8 files changed, 335 deletions(-)
