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Bug 873289 - sci-mathematics/gmp-ecm-7.0.5 failed to emerge with USE=cuda
Summary: sci-mathematics/gmp-ecm-7.0.5 failed to emerge with USE=cuda
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Michael Orlitzky
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2022-09-28 13:59 UTC by Leonid Kopylov
Modified: 2022-10-08 02:06 UTC (History)
4 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,9.20 KB, text/plain)
2022-09-28 14:00 UTC, Leonid Kopylov
Details

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Description Leonid Kopylov 2022-09-28 13:59:49 UTC
# emerge -pqv '=sci-mathematics/gmp-ecm-7.0.5::gentoo'
[ebuild   R   ] sci-mathematics/gmp-ecm-7.0.5  USE="cuda* custom-tune openmp -static-libs" CPU_FLAGS_X86="sse2"

# emerge --info '=sci-mathematics/gmp-ecm-7.0.5::gentoo'
Portage 3.0.37 (python 3.10.7-final-0, default/linux/amd64/17.1/desktop/gnome/systemd, gcc-11.3.1, glibc-2.36-r3, 5.19.11-gentoo-amd64 x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-5.19.11-gentoo-amd64-x86_64-12th_Gen_Intel-R-_Core-TM-_i7-12700-with-glibc2.36
KiB Mem:   131649552 total,  99917356 free
KiB Swap:    8388604 total,   8388604 free
Timestamp of repository gentoo: Tue, 27 Sep 2022 10:30:01 +0000
Head commit of repository gentoo: 48176e12fc9523e05f1f81c8a53e8baab05fd6d5
sh bash 5.1_p16-r2
ld GNU ld (Gentoo 2.39 p4) 2.39.0
ccache version 4.6.3 [enabled]
app-misc/pax-utils:        1.3.5::gentoo
app-shells/bash:           5.1_p16-r2::gentoo
dev-java/java-config:      2.3.1::gentoo
dev-lang/perl:             5.36.0::gentoo
dev-lang/python:           3.10.7::gentoo, 3.11.0_rc2::gentoo
dev-lang/rust-bin:         1.64.0::gentoo
dev-util/ccache:           4.6.3::gentoo
dev-util/cmake:            3.24.2::gentoo
dev-util/meson:            0.63.2-r1::gentoo
sys-apps/baselayout:       2.9::gentoo
sys-apps/sandbox:          2.29::gentoo
sys-apps/systemd:          251.4::gentoo
sys-devel/autoconf:        2.13-r3::gentoo, 2.71-r4::gentoo
sys-devel/automake:        1.16.5::gentoo
sys-devel/binutils:        2.39-r2::gentoo
sys-devel/binutils-config: 5.4.1::gentoo
sys-devel/clang:           14.0.6-r1::gentoo, 15.0.1::gentoo
sys-devel/gcc:             11.3.1_p20220909::gentoo, 12.2.0::gentoo
sys-devel/gcc-config:      2.6::gentoo
sys-devel/libtool:         2.4.7::gentoo
sys-devel/lld:             14.0.6::gentoo
sys-devel/llvm:            14.0.6-r2::gentoo, 15.0.1::gentoo
sys-devel/make:            4.3::gentoo
sys-kernel/linux-headers:  5.19::gentoo (virtual/os-headers)
sys-libs/glibc:            2.36-r3::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-verify-jobs: 1
    sync-rsync-extra-opts:
    sync-rsync-verify-max-age: 24
    sync-rsync-verify-metamanifest: yes

HomeAssistantRepository
    location: /var/lib/layman/HomeAssistantRepository
    sync-type: laymansync
    sync-uri: https://git.edevau.net/onkelbeh/HomeAssistantRepository.git
    masters: gentoo
    priority: 50

brave-overlay
    location: /var/lib/layman/brave-overlay
    sync-type: laymansync
    sync-uri: https://gitlab.com/jason.oliveira/brave-overlay.git
    masters: gentoo
    priority: 50

guru
    location: /var/lib/layman/guru
    sync-type: laymansync
    sync-uri: https://anongit.gentoo.org/git/repo/proj/guru.git
    masters: gentoo
    priority: 50

haskell
    location: /var/lib/layman/haskell
    sync-type: laymansync
    sync-uri: https://github.com/gentoo-haskell/gentoo-haskell.git
    masters: gentoo
    priority: 50

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA android AnyDesk-TOS geekbench google-chrome microsoft-edge Microsoft-vscode NVIDIA-CUDA OPERA-2018 PUEL RAR TeamViewer Vivaldi"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php8.1/ext-active/ /etc/php/cgi-php8.1/ext-active/ /etc/php/cli-php8.1/ext-active/ /etc/php/fpm-php8.1/ext-active/ /etc/php/phpdbg-php8.1/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
DISTDIR="/var/cache/distfiles"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg-live ccache config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict strict-keepdir unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
GENTOO_MIRRORS="https://mirror.isoc.org.il/pub/gentoo/"
LANG="en_US.utf8"
LC_ALL="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j12"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/bash"
USE="X a52 aac aalib accessibility acl acpi alsa amd64 ao appindicator archive aspell audit bash-completion berkdb bidi bluetooth bluray boost bpf branding brotli btrfs bzip2 cairo cdda cddb cdio cdr cgi cli colord contrib cron crypt cryptsetup cuda cups curl dbi dbus designer device-mapper djvu doc dri dts dvb dvd dvdr eds emacs enchant encode evo examples executable exif experimental extra extras fam fastcgi fbcon fdk ffmpeg fftw flac fluidsynth fontconfig fontforge fortran ftp fuse gamepad games gcrypt gd gdbm gdk-pixbuf geoip geolocation gif git glade gme gmp gnome gnome-keyring gnome-online-accounts gnutls go gpg gphoto2 gpm graphite graphviz gsm gssapi gstreamer gtk gtk-doc gtk3 gui guile harfbuzz hddtemp hdf5 heif help highlight hscolour html http http2 ibus iconv icu idn imagemagick imap imlib introspection iodbc ipv6 iso jack java javascript jbig jemalloc joystick jpeg jpeg2k json kerberos ladspa lame latex lcms ldap libass libcaca libevent libglvnd libnotify libsamplerate libsecret libtirpc libxml2 lm-sensors lmdb lua lv2 lvm lz4 lzma lzo mad magic maildir man mbedtls mbox memcached midi mng modplug mp3 mp4 mpeg mpi mtp multilib multimedia musepack mysql nas nautilus ncurses netlink nettle network networkmanager nfs nls nptl nss ntlm nvenc odbc offensive ogg openal opencl openexr opengl openmp openssl opus pam pango pcap pcre pdf perl phonon pkcs11 plugins png policykit portaudio postgres postscript ppds pulseaudio python qdbm qml qrcode qt5 raw rdma readline redis rss samba sasl screencast sctp sdl seccomp semantic-desktop skey smtp snappy sndfile sndio snmp sockets sound source sox speech speex spell split-usr sql sqlite ssh ssl startup-notification svg symlink syslog sysprof systemd taglib tbb tcl theora threads tiff tk tools tpm tracker tremor truetype twolame udev udisks unicode unwind upnp upnp-av upower usb utils uuid v4l vala vcd vdpau vim-syntax vnc vorbis vpx vulkan wavpack wayland webengine webkit webp websockets widgets wifi wmf wxwidgets x264 x265 xattr xcb xface xft xine xinerama xml xmp xpm xscreensaver xv xvid yaml zeroconf zeromq zip zlib zsh-completion zstd" ABI_X86="64 32" ADA_TARGET="gnat_2020" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets stage words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 f16c fma3 mmx mmxext pclmul popcnt rdrand sha sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="evdev joystick libinput" KERNEL="linux" L10N="en en-US he ru" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="nlpsolver scripting-beanshell scripting-javascript wiki-publisher" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-4 php8-0" POSTGRES_TARGETS="postgres12 postgres13" PYTHON_SINGLE_TARGET="python3_10" PYTHON_TARGETS="python3_10" RUBY_TARGETS="ruby27 ruby30 ruby31" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EMERGE_DEFAULT_OPTS, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LD, LEX, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS

=================================================================
                        Package Settings
=================================================================

sci-mathematics/gmp-ecm-7.0.5::gentoo was built with the following:
USE="custom-tune openmp -cuda -static-libs" ABI_X86="(64)" CPU_FLAGS_X86="sse2"
Comment 1 Leonid Kopylov 2022-09-28 14:00:13 UTC
Created attachment 814483 [details]
build.log
Comment 2 Michael Orlitzky gentoo-dev 2022-10-06 19:59:08 UTC
This is just a missing header:

  checking for cuda.h... no
  configure: error: required header file missing

Does anyone know what package should provide it? For reference, we currently have for gmp-ecm,

  DEPEND="dev-libs/gmp:=                                                          
      cuda? (                                                                     
          dev-util/nvidia-cuda-toolkit                                            
          x11-drivers/nvidia-drivers                                              
      )                                                                           
  "
Comment 3 Joonas Niilola gentoo-dev 2022-10-07 06:41:30 UTC
At least nvidia-cuda-toolkit provides it, according to portagefilelist.de. The problem with that is that it's amd64-only. 

I tried installing nvidia-drivers package and it doesn't seem to come with cuda.h installed, at least with default USE flags. 

So I don't know, has it been dropped from nvidia-drivers...?
Comment 4 François Bissey 2022-10-07 06:49:17 UTC
There is no reason for cuda.h to come with nvidia-drivers in my opinion. It is a separate functionality built on top of it.
Comment 5 Joonas Niilola gentoo-dev 2022-10-07 07:09:41 UTC
Another question: has anyone succesfully installed the package with +cuda? Because apparently you'd _really_ need to use cuda.eclass with sandbox predicts etc to get it to work. 

Courtesy of ionen, who most likely has nvidia-drivers/cuda properly configured:

configure: Using cuda.h from /opt/cuda/include
checking for cuda.h... yes
checking that CUDA Toolkit version is at least 3.0... (11.7) yes
configure: Using CUDA dynamic library from /opt/cuda/lib64
checking for cuInit in -lcuda... yes
checking that CUDA Toolkit version and runtime version are the same... Could not get runtime version
Error msg: no CUDA-capable device is detected
no
configure: error: 'cuda.h' and 'cudart' library have different versions, you have to reinstall CUDA properly, or use the --with-cuda parameter to tell configure the path to the CUDA library and header you want to use
Comment 6 Ionen Wolkens gentoo-dev 2022-10-07 07:13:46 UTC
This at least needed e.g. --with-cuda="${ESYSROOT}"/opt/cuda (to find the header), cuda_add_sandbox (or else had /dev/nvidiactl sandbox violation), and still didn't work as shown above -- but haven't looked further.

My suggestion is to omit support if can't test it, if someone want this hopefully they'll offer a PR with a working solution.
Comment 7 François Bissey 2022-10-07 07:16:02 UTC
I do not have cuda on any of my machines. The ones that have nvidia cards are likely too old. I have really old stuff :) so I cannot test cuda stuff.
Comment 8 David Seifert gentoo-dev 2022-10-07 08:28:46 UTC
(In reply to Ionen Wolkens from comment #6)
> This at least needed e.g. --with-cuda="${ESYSROOT}"/opt/cuda (to find the
> header), cuda_add_sandbox (or else had /dev/nvidiactl sandbox violation),
> and still didn't work as shown above -- but haven't looked further.
> 
> My suggestion is to omit support if can't test it, if someone want this
> hopefully they'll offer a PR with a working solution.

I second this take. Adding cuda support involves more than just adding a package to DEPEND/RDEPEND.
Comment 9 Larry the Git Cow gentoo-dev 2022-10-08 02:06:55 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=99594b75e43dcb09056c07ffb3bd4270a916913d

commit 99594b75e43dcb09056c07ffb3bd4270a916913d
Author:     Michael Orlitzky <mjo@gentoo.org>
AuthorDate: 2022-10-08 01:15:04 +0000
Commit:     Michael Orlitzky <mjo@gentoo.org>
CommitDate: 2022-10-08 02:05:12 +0000

    sci-mathematics/gmp-ecm: new revision to drop USE=cuda support.
    
    Our CUDA support doesn't work at the moment, and neither François nor I
    have access to the hardware. To avoid annoying users, we disable it
    until someone who has the hardware can tell us how to fix it.
    
    And while I'm deleting things... we say goodbye to static-libs, too.
    They aren't generally useful to end users.
    
    Closes: https://bugs.gentoo.org/873289
    Signed-off-by: Michael Orlitzky <mjo@gentoo.org>

 .../{gmp-ecm-7.0.5.ebuild => gmp-ecm-7.0.5-r1.ebuild}   | 17 +++++------------
 sci-mathematics/gmp-ecm/metadata.xml                    |  3 ---
 2 files changed, 5 insertions(+), 15 deletions(-)