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Bug 832101 - sci-mathematics/polymake-4.5 - x86_64-pc-linux-gnu-g++: fatal error: cannot read spec file libgomp.spec: No such file or directory
Summary: sci-mathematics/polymake-4.5 - x86_64-pc-linux-gnu-g++: fatal error: cannot r...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo Science Mathematics related packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2022-01-26 17:44 UTC by Toralf Förster
Modified: 2022-01-30 22:54 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge-info.txt (emerge-info.txt,17.43 KB, text/plain)
2022-01-26 17:45 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,316.46 KB, text/plain)
2022-01-26 17:45 UTC, Toralf Förster
Details
environment (environment,72.66 KB, text/plain)
2022-01-26 17:45 UTC, Toralf Förster
Details
etc.portage.tar.bz2 (etc.portage.tar.bz2,21.86 KB, application/x-bzip)
2022-01-26 17:45 UTC, Toralf Förster
Details
sci-mathematics:polymake-4.5:20220126-173334.log (sci-mathematics:polymake-4.5:20220126-173334.log,3.35 KB, text/plain)
2022-01-26 17:45 UTC, Toralf Förster
Details
temp.tar.bz2 (temp.tar.bz2,18.87 KB, application/x-bzip)
2022-01-26 17:45 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2022-01-26 17:44:59 UTC
The most probable reasons are that the library is installed at a non-standard location,
lacking developer's subpackage or missing at all.
Please refer to the installation instructions at http://www.polymake.org/doku.php/howto/install.
The complete error log follows:
x86_64-pc-linux-gnu-g++: fatal error: cannot read spec file ‘libgomp.spec’: No such file or directory
compilation terminated.
 * ERROR: sci-mathematics/polymake-4.5::gentoo failed (configure phase):

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.1_no_multilib_systemd-j4-20220123-180155

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-9.3.1
 [2] x86_64-pc-linux-gnu-11.2.1 *
clang/llvm (if any):
clang version 13.0.0
Target: x86_64-pc-linux-gnu
Thread model: posix
InstalledDir: /usr/lib/llvm/13/bin
/usr/lib/llvm/13
13.0.0
Python 3.9.10
Available Ruby profiles:
  [1]   ruby26 (with Rubygems)
  [2]   ruby27 (with Rubygems)
  [3]   ruby30 (with Rubygems) *
Available Rust versions:
  [1]   rust-bin-1.58.1 *
The following VMs are available for generation-2:
*)	Eclipse Temurin JDK 11.0.14_p9 [openjdk-bin-11]
2)	Eclipse Temurin JDK 8.312_p07 [openjdk-bin-8]
Available Java Virtual Machines:
  [1]   openjdk-bin-8 
  [2]   openjdk-bin-11  system-vm

The Glorious Glasgow Haskell Compilation System, version 8.10.4
php cli:

  HEAD of ::gentoo
commit 01e704256994da0e779f3eb1c7361afe78024429
Author: Repository mirror & CI <repomirrorci@gentoo.org>
Date:   Wed Jan 26 16:07:04 2022 +0000

    2022-01-26 16:07:02 UTC

emerge -qpvO sci-mathematics/polymake
[ebuild  N    ] sci-mathematics/polymake-4.5  USE="cdd libpolymake nauty ppl -bliss -flint -lrs -normaliz -singular"
Comment 1 Toralf Förster gentoo-dev 2022-01-26 17:45:00 UTC
Created attachment 763671 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2022-01-26 17:45:02 UTC
Created attachment 763672 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2022-01-26 17:45:03 UTC
Created attachment 763673 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2022-01-26 17:45:05 UTC
Created attachment 763674 [details]
etc.portage.tar.bz2
Comment 5 Toralf Förster gentoo-dev 2022-01-26 17:45:05 UTC
Created attachment 763675 [details]
sci-mathematics:polymake-4.5:20220126-173334.log
Comment 6 Toralf Förster gentoo-dev 2022-01-26 17:45:06 UTC
Created attachment 763676 [details]
temp.tar.bz2
Comment 7 Larry the Git Cow gentoo-dev 2022-01-30 22:54:49 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=67c311a021cd0fd8eb6d4b950357f658f97691d4

commit 67c311a021cd0fd8eb6d4b950357f658f97691d4
Author:     Michael Orlitzky <mjo@gentoo.org>
AuthorDate: 2022-01-30 22:53:17 +0000
Commit:     Michael Orlitzky <mjo@gentoo.org>
CommitDate: 2022-01-30 22:53:37 +0000

    sci-mathematics/polymake: new upstream release polymake-4.6.
    
    Standard version bump, and we now explicitly disable OpenMP. The
    upstream pseudo-configure script tries to append -fopenmp to *FLAGS
    otherwise, causing build failures with non-OpenMP toolchains. OpenMP
    is used minimally by polymake itself; the real application is to its
    bundled libraries (that we unbundle).
    
    Closes: https://bugs.gentoo.org/832101
    Package-Manager: Portage-3.0.30, Repoman-3.0.3
    Signed-off-by: Michael Orlitzky <mjo@gentoo.org>

 sci-mathematics/polymake/Manifest                              |  2 +-
 .../polymake/{polymake-4.5.ebuild => polymake-4.6.ebuild}      | 10 +++++++---
 2 files changed, 8 insertions(+), 4 deletions(-)