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Bug 830693 - sci-physics/lammps-20200303-r2 - /.../info.cpp: error: aggregate LAMMPS_NS::Info::command(int, char )::mallinfo mi has incomplete
Summary: sci-physics/lammps-20200303-r2 - /.../info.cpp: error: aggregate LAMMPS_NS::I...
Status: RESOLVED OBSOLETE
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo musl team
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2022-01-06 18:27 UTC by Toralf Förster
Modified: 2023-05-05 17:32 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge-info.txt (emerge-info.txt,15.19 KB, text/plain)
2022-01-06 18:27 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,75.48 KB, text/plain)
2022-01-06 18:27 UTC, Toralf Förster
Details
environment (environment,136.83 KB, text/plain)
2022-01-06 18:27 UTC, Toralf Förster
Details
etc.portage.tar.bz2 (etc.portage.tar.bz2,3.65 KB, application/x-bzip)
2022-01-06 18:27 UTC, Toralf Förster
Details
logs.tar.bz2 (logs.tar.bz2,450.47 KB, application/x-bzip)
2022-01-06 18:27 UTC, Toralf Förster
Details
temp.tar.bz2 (temp.tar.bz2,44.24 KB, application/x-bzip)
2022-01-06 18:27 UTC, Toralf Förster
Details
sci-physics:lammps-20200303-r2_stripped.log.bz2 (sci-physics:lammps-20200303-r2_stripped.log.bz2,14.37 KB, application/x-bzip)
2022-01-06 18:32 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2022-01-06 18:27:44 UTC
too long lines were shrinked:

/usr/bin/x86_64-gentoo-linux-musl-g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_FFMPEG -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/var/tmp/portage/sci-physics/lammps-20200303-r2/work/lammps-stable_3Mar2020/src -I/var/tmp/portage/sci-
[ 32%] Building CXX object CMakeFiles/lammps.dir/var/tmp/portage/sci-physics/lammps-20200303-r2/work/lammps-stable_3Mar2020/src/math_extra.cpp.o
/usr/bin/x86_64-gentoo-linux-musl-g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_FFMPEG -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -Dlammps_EXPORTS -I/var/tmp/portage/sci-physics/lammps-20200303-r2/work/lammps-stable_3Mar2020/src -I/var/tmp/portage/sci-
/var/tmp/portage/sci-physics/lammps-20200303-r2/work/lammps-stable_3Mar2020/src/info.cpp: In member function 'void LAMMPS_NS::Info::command(int, char**)':
/var/tmp/portage/sci-physics/lammps-20200303-r2/work/lammps-stable_3Mar2020/src/info.cpp:343:21: error: aggregate 'LAMMPS_NS::Info::command(int, char**)::mallinfo mi' has incomplete type and cannot be defined
  343 |     struct mallinfo mi;
      |                     ^~

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.0_musl-j4-20220105-210428

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-gentoo-linux-musl-11.2.1 *
clang version 13.0.0
Target: x86_64-gentoo-linux-musl
Thread model: posix
InstalledDir: /usr/lib/llvm/13/bin
/usr/lib/llvm/13
13.0.0
Python 3.9.9
Available Ruby profiles:
  [1]   ruby26 (with Rubygems)
  [2]   ruby27 (with Rubygems)
  [3]   ruby30 (with Rubygems) *
Available Rust versions:
  [1]   rust-1.57.0 *
php cli:
  [1]   php7.3
  [2]   php7.4
  [3]   php8.1 *

  HEAD of ::gentoo
commit 98e8c4a8ee26e5f127f10f786446fb0d23f6fd67
Author: Repository mirror & CI <repomirrorci@gentoo.org>
Date:   Thu Jan 6 14:21:52 2022 +0000

    2022-01-06 14:21:51 UTC

emerge -qpvO sci-physics/lammps
[ebuild  N    ] sci-physics/lammps-20200303-r2  USE="(-cuda) -examples -gzip -kokkos -lammps-memalign -mpi -netcdf -python -test" PYTHON_TARGETS="python3_9 -python3_8 -python3_10"
Comment 1 Toralf Förster gentoo-dev 2022-01-06 18:27:46 UTC
Created attachment 761409 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2022-01-06 18:27:47 UTC
Created attachment 761410 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2022-01-06 18:27:48 UTC
Created attachment 761411 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2022-01-06 18:27:50 UTC
Created attachment 761412 [details]
etc.portage.tar.bz2
Comment 5 Toralf Förster gentoo-dev 2022-01-06 18:27:52 UTC
Created attachment 761413 [details]
logs.tar.bz2
Comment 6 Toralf Förster gentoo-dev 2022-01-06 18:27:53 UTC
Created attachment 761414 [details]
temp.tar.bz2
Comment 7 Toralf Förster gentoo-dev 2022-01-06 18:32:43 UTC
Created attachment 761415 [details]
sci-physics:lammps-20200303-r2_stripped.log.bz2

sci-physics:lammps-20200303-r2_stripped.log.bz2
Comment 8 Larry the Git Cow gentoo-dev 2022-03-04 17:38:23 UTC
The bug has been referenced in the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d1918a66024dbcb24aa822b3402c6b7b8862070d

commit d1918a66024dbcb24aa822b3402c6b7b8862070d
Author:     Andrew Ammerlaan <andrewammerlaan@gentoo.org>
AuthorDate: 2022-03-04 17:34:12 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan@gentoo.org>
CommitDate: 2022-03-04 17:38:15 +0000

    sci-physics/lammps: add version 2022 Feb 17
    
    Closes: https://bugs.gentoo.org/834112
    Bug: https://bugs.gentoo.org/763189
    Bug: https://bugs.gentoo.org/815085
    Bug: https://bugs.gentoo.org/659882
    Bug: https://bugs.gentoo.org/830693
    Package-Manager: Portage-3.0.30, Repoman-3.0.3
    Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>

 sci-physics/lammps/Manifest               |   1 +
 sci-physics/lammps/lammps-20220217.ebuild | 164 ++++++++++++++++++++++++++++++
 sci-physics/lammps/metadata.xml           |   6 +-
 3 files changed, 169 insertions(+), 2 deletions(-)
Comment 9 Nicolas Bock gentoo-dev 2023-05-05 17:32:29 UTC
Please retest with current version lammps-20220623