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Bug 829588 - sci-libs/tensorflow-2.7.0-r1: Segmentation fault on model create
Summary: sci-libs/tensorflow-2.7.0-r1: Segmentation fault on model create
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: AMD64 Linux
: Normal major (vote)
Assignee: Jason Zaman
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2021-12-19 02:17 UTC by Oleg Korsak
Modified: 2022-02-26 17:29 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


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Description Oleg Korsak 2021-12-19 02:17:15 UTC
Installed:

[ebuild   R    ] sci-libs/tensorflow-2.7.0-r1::gentoo  USE="python xla -cuda -mpi" CPU_FLAGS_X86="avx avx2 fma3 sse sse2 sse3 sse4_1 sse4_2 -fma4" PYTHON_TARGETS="python3_9 -python3_8" 0 KiB

Reproducible: Always

Steps to Reproduce:
1. launch python3.9
2. import tensorflow as tf
3. tf.keras.models.Sequential([])
Actual Results:  
Segmentation fault

Expected Results:  
Model object being created

Portage 3.0.30 (python 3.10.1-final-0, default/linux/amd64/17.1/desktop/plasma, gcc-11.2.1, glibc-2.34-r3, 5.15.10-gentoo-x86_64 x86_64)
=================================================================
System uname: Linux-5.15.10-gentoo-x86_64-x86_64-AMD_Ryzen_Threadripper_2950X_16-Core_Processor-with-glibc2.34
KiB Mem:    65812320 total,  51527744 free
KiB Swap:   67108860 total,  67108860 free
Timestamp of repository gentoo: Sun, 19 Dec 2021 01:30:01 +0000
Head commit of repository gentoo: 7b4b1b180951c92ab88030c18c47eb97a146b018
Head commit of repository steam-overlay: bcdf7b7b1ffb3058a0d924e849a5abf18f364d9c

sh bash 5.1_p12
ld GNU ld (Gentoo 2.37_p1 p1) 2.37
distcc 3.4 x86_64-pc-linux-gnu [disabled]
app-misc/pax-utils:        1.3.3::gentoo
app-shells/bash:           5.1_p12::gentoo
dev-java/java-config:      2.3.1::gentoo
dev-lang/perl:             5.34.0-r6::gentoo
dev-lang/python:           2.7.18_p13::gentoo, 3.9.9::gentoo, 3.10.1-r1::gentoo, 3.11.0_alpha3::gentoo
dev-lang/rust:             1.57.0::gentoo
dev-util/cmake:            3.22.1::gentoo
dev-util/meson:            0.60.2-r1::gentoo
sys-apps/baselayout:       2.8::gentoo
sys-apps/openrc:           0.44.9::gentoo
sys-apps/sandbox:          2.29::gentoo
sys-devel/autoconf:        2.13-r1::gentoo, 2.71-r1::gentoo
sys-devel/automake:        1.16.5::gentoo
sys-devel/binutils:        2.37_p1-r1::gentoo
sys-devel/binutils-config: 5.4::gentoo
sys-devel/clang:           13.0.0::gentoo
sys-devel/gcc:             11.2.1_p20211127::gentoo
sys-devel/gcc-config:      2.5-r1::gentoo
sys-devel/libtool:         2.4.6-r6::gentoo
sys-devel/lld:             13.0.0::gentoo
sys-devel/llvm:            12.0.1::gentoo, 13.0.0::gentoo
sys-devel/make:            4.3::gentoo
sys-kernel/linux-headers:  5.15-r1::gentoo (virtual/os-headers)
sys-libs/glibc:            2.34-r3::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-verify-metamanifest: yes
    sync-rsync-verify-jobs: 1
    sync-rsync-verify-max-age: 24
    sync-rsync-extra-opts: 

steam-overlay
    location: /usr/local/portage/steam-overlay
    sync-type: git
    sync-uri: https://github.com/anyc/steam-overlay.git
    masters: gentoo
    priority: 50

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=znver1 -mmmx -mno-3dnow -msse -msse2 -msse3 -mssse3 -msse4a -mcx16 -msahf -mmovbe -maes -msha -mpclmul -mpopcnt -mabm -mno-lwp -mfma -mno-fma4 -mno-xop -mbmi -mno-sgx -mbmi2 -mno-pconfig -mno-wbnoinvd -mno-tbm -mavx -mavx2 -msse4.2 -msse4.1 -mlzcnt -mno-rtm -mno-hle -mrdrnd -mf16c -mfsgsbase -mrdseed -mprfchw -madx -mfxsr -mxsave -mxsaveopt -mno-avx512f -mno-avx512er -mno-avx512cd -mno-avx512pf -mno-prefetchwt1 -mclflushopt -mxsavec -mxsaves -mno-avx512dq -mno-avx512bw -mno-avx512vl -mno-avx512ifma -mno-avx512vbmi -mno-avx5124fmaps -mno-avx5124vnniw -mno-clwb -mmwaitx -mclzero -mno-pku -mno-rdpid -mno-gfni -mno-shstk -mno-avx512vbmi2 -mno-avx512vnni -mno-vaes -mno-vpclmulqdq -mno-avx512bitalg -mno-avx512vpopcntdq -mno-movdiri -mno-movdir64b -mno-waitpkg -mno-cldemote -mno-ptwrite -mno-avx512bf16 -mno-enqcmd -mno-avx512vp2intersect --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=512 -mno-tsxldtrk -mno-serialize -mno-amx-tile -mno-widekl -mno-avxvnni -mno-amx-int8 -mno-uintr -mno-hreset -mno-amx-bf16 -mno-kl -fomit-frame-pointer -mtune=znver1"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe -march=znver1 -mmmx -mno-3dnow -msse -msse2 -msse3 -mssse3 -msse4a -mcx16 -msahf -mmovbe -maes -msha -mpclmul -mpopcnt -mabm -mno-lwp -mfma -mno-fma4 -mno-xop -mbmi -mno-sgx -mbmi2 -mno-pconfig -mno-wbnoinvd -mno-tbm -mavx -mavx2 -msse4.2 -msse4.1 -mlzcnt -mno-rtm -mno-hle -mrdrnd -mf16c -mfsgsbase -mrdseed -mprfchw -madx -mfxsr -mxsave -mxsaveopt -mno-avx512f -mno-avx512er -mno-avx512cd -mno-avx512pf -mno-prefetchwt1 -mclflushopt -mxsavec -mxsaves -mno-avx512dq -mno-avx512bw -mno-avx512vl -mno-avx512ifma -mno-avx512vbmi -mno-avx5124fmaps -mno-avx5124vnniw -mno-clwb -mmwaitx -mclzero -mno-pku -mno-rdpid -mno-gfni -mno-shstk -mno-avx512vbmi2 -mno-avx512vnni -mno-vaes -mno-vpclmulqdq -mno-avx512bitalg -mno-avx512vpopcntdq -mno-movdiri -mno-movdir64b -mno-waitpkg -mno-cldemote -mno-ptwrite -mno-avx512bf16 -mno-enqcmd -mno-avx512vp2intersect --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=512 -mno-tsxldtrk -mno-serialize -mno-amx-tile -mno-widekl -mno-avxvnni -mno-amx-int8 -mno-uintr -mno-hreset -mno-amx-bf16 -mno-kl -fomit-frame-pointer -mtune=znver1"
DISTDIR="/var/cache/distfiles"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe -march=znver1 -mmmx -mno-3dnow -msse -msse2 -msse3 -mssse3 -msse4a -mcx16 -msahf -mmovbe -maes -msha -mpclmul -mpopcnt -mabm -mno-lwp -mfma -mno-fma4 -mno-xop -mbmi -mno-sgx -mbmi2 -mno-pconfig -mno-wbnoinvd -mno-tbm -mavx -mavx2 -msse4.2 -msse4.1 -mlzcnt -mno-rtm -mno-hle -mrdrnd -mf16c -mfsgsbase -mrdseed -mprfchw -madx -mfxsr -mxsave -mxsaveopt -mno-avx512f -mno-avx512er -mno-avx512cd -mno-avx512pf -mno-prefetchwt1 -mclflushopt -mxsavec -mxsaves -mno-avx512dq -mno-avx512bw -mno-avx512vl -mno-avx512ifma -mno-avx512vbmi -mno-avx5124fmaps -mno-avx5124vnniw -mno-clwb -mmwaitx -mclzero -mno-pku -mno-rdpid -mno-gfni -mno-shstk -mno-avx512vbmi2 -mno-avx512vnni -mno-vaes -mno-vpclmulqdq -mno-avx512bitalg -mno-avx512vpopcntdq -mno-movdiri -mno-movdir64b -mno-waitpkg -mno-cldemote -mno-ptwrite -mno-avx512bf16 -mno-enqcmd -mno-avx512vp2intersect --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=512 -mno-tsxldtrk -mno-serialize -mno-amx-tile -mno-widekl -mno-avxvnni -mno-amx-int8 -mno-uintr -mno-hreset -mno-amx-bf16 -mno-kl -fomit-frame-pointer -mtune=znver1"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe -march=znver1 -mmmx -mno-3dnow -msse -msse2 -msse3 -mssse3 -msse4a -mcx16 -msahf -mmovbe -maes -msha -mpclmul -mpopcnt -mabm -mno-lwp -mfma -mno-fma4 -mno-xop -mbmi -mno-sgx -mbmi2 -mno-pconfig -mno-wbnoinvd -mno-tbm -mavx -mavx2 -msse4.2 -msse4.1 -mlzcnt -mno-rtm -mno-hle -mrdrnd -mf16c -mfsgsbase -mrdseed -mprfchw -madx -mfxsr -mxsave -mxsaveopt -mno-avx512f -mno-avx512er -mno-avx512cd -mno-avx512pf -mno-prefetchwt1 -mclflushopt -mxsavec -mxsaves -mno-avx512dq -mno-avx512bw -mno-avx512vl -mno-avx512ifma -mno-avx512vbmi -mno-avx5124fmaps -mno-avx5124vnniw -mno-clwb -mmwaitx -mclzero -mno-pku -mno-rdpid -mno-gfni -mno-shstk -mno-avx512vbmi2 -mno-avx512vnni -mno-vaes -mno-vpclmulqdq -mno-avx512bitalg -mno-avx512vpopcntdq -mno-movdiri -mno-movdir64b -mno-waitpkg -mno-cldemote -mno-ptwrite -mno-avx512bf16 -mno-enqcmd -mno-avx512vp2intersect --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=512 -mno-tsxldtrk -mno-serialize -mno-amx-tile -mno-widekl -mno-avxvnni -mno-amx-int8 -mno-uintr -mno-hreset -mno-amx-bf16 -mno-kl -fomit-frame-pointer -mtune=znver1"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="lv_LV.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LINGUAS="ru en"
MAKEOPTS="-j33"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/bash"
USE="X a52 aac acpi activities alsa alsa-plugin amd64 apng asyncns bindist bluetooth branding bzip2 cairo caps cdda cdr cli colord crypt cryptsetup cups custom-cflags dbus declarative device-mapper dhcp dhcpcd discover dri dts dvd dvdr egl elogind emboss encode exif flac fortran gdbm gif gles2 gnutls gpm grub gui heif iconv icu introspection ipv6 jack jpeg kde kipi kwallet lcms ldac libglvnd libnotify libtirpc llvm lm-sensors mad minizip mng mp3 mp4 mpeg mtp ncurses networkmanager nls nptl ogg openal opencl opengl openmp openrc pam pango pdf phonon pipewire plasma png policykit postgres ppds python qml qt5 qt6 readline realtime rocm scripttools sdl seccomp semantic-desktop sftp split-usr ssl startup-notification svg theora tiff truetype udev udisks unicode upower usb vorbis vulkan wayland webp webrts-aec widgets wifi wxwidgets x264 x265 xattr xcb xml xv xvid zlib" ABI_X86="64" ADA_TARGET="gnat_2020" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 f16c fma3 mmx mmxext pclmul popcnt rdrand sha sse sse2 sse3 sse4_1 sse4_2 sse4a ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64 pc" INPUT_DEVICES="evdev libinput wacom" KERNEL="linux" L10N="ru en" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LUA_SINGLE_TARGET="lua5-3" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-3 php7-4" POSTGRES_TARGETS="postgres13" PYTHON_SINGLE_TARGET="python3_9" PYTHON_TARGETS="python3_9 python3_10" RUBY_TARGETS="ruby30" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev radeon radeonsi" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EMERGE_DEFAULT_OPTS, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LEX, LFLAGS, LIBTOOL, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS
Comment 1 Larry the Git Cow gentoo-dev 2021-12-24 23:18:31 UTC
The bug has been referenced in the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=60200340ba1bbfe5572c7687ba6b5fa632d4216f

commit 60200340ba1bbfe5572c7687ba6b5fa632d4216f
Author:     Jason Zaman <perfinion@gentoo.org>
AuthorDate: 2021-12-24 23:17:07 +0000
Commit:     Jason Zaman <perfinion@gentoo.org>
CommitDate: 2021-12-24 23:17:07 +0000

    sci-libs/tensorflow: Remove broken 2.7.0-r1
    
    2.7.0-r1 moved to C++17 but has several issues. Remove for now until it
    can be fixed.
    
    Bug: https://bugs.gentoo.org/829114
    Bug: https://bugs.gentoo.org/829588
    Bug: https://bugs.gentoo.org/829716
    Package-Manager: Portage-3.0.28, Repoman-3.0.3
    Signed-off-by: Jason Zaman <perfinion@gentoo.org>

 sci-libs/tensorflow/Manifest                   |   1 -
 sci-libs/tensorflow/tensorflow-2.7.0-r1.ebuild | 412 -------------------------
 2 files changed, 413 deletions(-)
Comment 2 Jason Zaman gentoo-dev 2022-02-26 17:29:24 UTC
tf-2.8 should work now with C++17