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Bug 815178 - dev-python/agate: does not work with dev-python/parsedatetime-2.6, breaks dev-python/csvkit
Summary: dev-python/agate: does not work with dev-python/parsedatetime-2.6, breaks dev...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Zac Medico
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2021-09-27 19:14 UTC by Zoltan Puskas
Modified: 2022-02-04 18:06 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


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Description Zoltan Puskas 2021-09-27 19:14:33 UTC
When using `csvsql` command from dev-python/csvkit, it fails, as it's dependency dev-python/agate is broken.


Reproducible: Always

Steps to Reproduce:
1. csvsql --help (or any csvsql command really)

Actual Results:  
>>> csvsql --help
Traceback (most recent call last):
  File "/usr/lib/python3.9/site-packages/pkg_resources/__init__.py", line 568, in _build_master
    ws.require(__requires__)
  File "/usr/lib/python3.9/site-packages/pkg_resources/__init__.py", line 886, in require
    needed = self.resolve(parse_requirements(requirements))
  File "/usr/lib/python3.9/site-packages/pkg_resources/__init__.py", line 777, in resolve
    raise VersionConflict(dist, req).with_context(dependent_req)
pkg_resources.ContextualVersionConflict: (parsedatetime 2.6 (/usr/lib/python3.9/site-packages), Requirement.parse('parsedatetime!=2.5,!=2.6,>=2.1'), {'agate'})

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/usr/lib/python-exec/python3.9/csvsql", line 33, in <module>
    sys.exit(load_entry_point('csvkit==1.0.6', 'console_scripts', 'csvsql')())
  File "/usr/lib/python-exec/python3.9/csvsql", line 25, in importlib_load_entry_point
    return next(matches).load()
  File "/usr/lib/python3.9/importlib/metadata.py", line 77, in load
    module = import_module(match.group('module'))
  File "/usr/lib/python3.9/importlib/__init__.py", line 127, in import_module
    return _bootstrap._gcd_import(name[level:], package, level)
  File "<frozen importlib._bootstrap>", line 1030, in _gcd_import
  File "<frozen importlib._bootstrap>", line 1007, in _find_and_load
  File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked
  File "<frozen importlib._bootstrap>", line 680, in _load_unlocked
  File "<frozen importlib._bootstrap_external>", line 855, in exec_module
  File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed
  File "/usr/lib/python3.9/site-packages/csvkit/utilities/csvsql.py", line 8, in <module>
    from pkg_resources import iter_entry_points
  File "/usr/lib/python3.9/site-packages/pkg_resources/__init__.py", line 3243, in <module>
    def _initialize_master_working_set():
  File "/usr/lib/python3.9/site-packages/pkg_resources/__init__.py", line 3226, in _call_aside
    f(*args, **kwargs)
  File "/usr/lib/python3.9/site-packages/pkg_resources/__init__.py", line 3255, in _initialize_master_working_set
    working_set = WorkingSet._build_master()
  File "/usr/lib/python3.9/site-packages/pkg_resources/__init__.py", line 570, in _build_master
    return cls._build_from_requirements(__requires__)
  File "/usr/lib/python3.9/site-packages/pkg_resources/__init__.py", line 583, in _build_from_requirements
    dists = ws.resolve(reqs, Environment())
  File "/usr/lib/python3.9/site-packages/pkg_resources/__init__.py", line 772, in resolve
    raise DistributionNotFound(req, requirers)
pkg_resources.DistributionNotFound: The 'parsedatetime!=2.5,!=2.6,>=2.1' distribution was not found and is required by agate

Expected Results:  
csvsql works


https://github.com/wireservice/agate/blob/master/setup.py#L42
Comment 1 Zoltan Puskas 2021-09-27 19:15:57 UTC
# emerge --info
Portage 3.0.23 (python 3.9.5-final-0, default/linux/amd64/17.1/desktop/plasma/systemd, gcc-10.3.0, glibc-2.33-r1, 5.12.12-gentoo-x86_64 x86_64)
=================================================================
System uname: Linux-5.12.12-gentoo-x86_64-x86_64-Intel-R-_Core-TM-_i7-8650U_CPU_@_1.90GHz-with-glibc2.33
KiB Mem:    24371508 total,   6564104 free
KiB Swap:    2198504 total,   2198504 free
Timestamp of repository gentoo: Mon, 27 Sep 2021 08:00:01 +0000
Head commit of repository gentoo: 2f5d034f7879078600d505036bee10da8a8d0f09
Head commit of repository sinustrom: 85dede319866f9bbb1643d9299ca59b774f56aca

sh bash 5.1_p8
ld GNU ld (Gentoo 2.36.1 p3) 2.36.1
distcc 3.4 x86_64-pc-linux-gnu [enabled]
app-shells/bash:          5.1_p8::gentoo
dev-java/java-config:     2.3.1::gentoo
dev-lang/perl:            5.34.0::gentoo
dev-lang/python:          2.7.18_p10::gentoo, 3.6.13_p5::gentoo, 3.9.5_p2::gentoo, 3.10.0_beta3::gentoo
dev-lang/rust:            1.53.0::gentoo
dev-util/cmake:           3.20.2::gentoo
sys-apps/baselayout:      2.7-r3::gentoo
sys-apps/sandbox:         2.24::gentoo
sys-devel/autoconf:       2.13-r1::gentoo, 2.69-r5::gentoo
sys-devel/automake:       1.13.4-r2::gentoo, 1.16.3-r1::gentoo
sys-devel/binutils:       2.36.1-r1::gentoo
sys-devel/gcc:            10.3.0-r1::gentoo
sys-devel/gcc-config:     2.4::gentoo
sys-devel/libtool:        2.4.6-r6::gentoo
sys-devel/make:           4.3::gentoo
sys-kernel/linux-headers: 5.12::gentoo (virtual/os-headers)
sys-libs/glibc:           2.33-r1::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://172.24.0.2/gentoo-portage
    priority: -1000
    sync-rsync-verify-metamanifest: yes
    sync-rsync-extra-opts:
    sync-rsync-verify-max-age: 24
    sync-rsync-verify-jobs: 1

sinustrom
    location: /var/lib/layman/sinustrom
    sync-type: git
    sync-uri: https://github.com/zpuskas/sinustrom-gentoo-overlay.git
    masters: gentoo
    priority: 50

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="@FREE"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=broadwell -mmmx -mno-3dnow -msse -msse2 -msse3 -mssse3 -mno-sse4a -mcx16 -msahf -mmovbe -maes -mno-sha -mpclmul -mpopcnt -mabm -mno-lwp -mfma -mno-fma4 -mno-xop -mbmi -msgx -mbmi2 -mno-tbm -mavx -mavx2 -msse4.2 -msse4.1 -mlzcnt -mrtm -mhle -mrdrnd -mf16c -mfsgsbase -mrdseed -mprfchw -madx -mfxsr -mxsave -mxsaveopt -mno-avx512f -mno-avx512er -mno-avx512cd -mno-avx512pf -mno-prefetchwt1 -mclflushopt -mxsavec -mxsaves -mno-avx512dq -mno-avx512bw -mno-avx512vl -mno-avx512ifma -mno-avx512vbmi -mno-avx5124fmaps -mno-avx5124vnniw -mno-clwb -mno-mwaitx -mno-clzero -mno-pku -mno-rdpid --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=8192 -mtune=generic -O3 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=broadwell -mmmx -mno-3dnow -msse -msse2 -msse3 -mssse3 -mno-sse4a -mcx16 -msahf -mmovbe -maes -mno-sha -mpclmul -mpopcnt -mabm -mno-lwp -mfma -mno-fma4 -mno-xop -mbmi -msgx -mbmi2 -mno-tbm -mavx -mavx2 -msse4.2 -msse4.1 -mlzcnt -mrtm -mhle -mrdrnd -mf16c -mfsgsbase -mrdseed -mprfchw -madx -mfxsr -mxsave -mxsaveopt -mno-avx512f -mno-avx512er -mno-avx512cd -mno-avx512pf -mno-prefetchwt1 -mclflushopt -mxsavec -mxsaves -mno-avx512dq -mno-avx512bw -mno-avx512vl -mno-avx512ifma -mno-avx512vbmi -mno-avx5124fmaps -mno-avx5124vnniw -mno-clwb -mno-mwaitx -mno-clzero -mno-pku -mno-rdpid --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=8192 -mtune=generic -O3 -pipe"
DISTDIR="/usr/portage/distfiles"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance cgroup collision-protect config-protect-if-modified distcc distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="rsync://172.24.0.2/gentoo-distfiles http://mirror.csclub.uwaterloo.ca/gentoo-distfiles/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j96 -l8"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/tmp"
USE="X a52 aac acl acpi activities aes alsa amd64 avx avx2 bash-completion bluetooth branding bzip2 cairo cdda cdr cli crypt cups dbus declarative dri dts dvd dvdr emboss encode exif f16c flac fma3 fortran gdbm gif gphoto2 gpm gtk gui hardened iconv icu ipv6 jpeg jpeg2k kde kipi kwallet lcms libglvnd libnotify libtirpc lm_sensors lzma mad mmx mmxext mng mp3 mp4 mpeg multilib ncurses networkmanager nls nptl ogg opengl openmp pam pango pclmul pcre pdf plasma png policykit popcnt posix ppds pulseaudio qml qt5 readline sdl seccomp smp spell split-usr sse sse2 sse3 sse4_1 sse4_2 ssl ssse3 startup-notification svg systemd tcpd threads tiff truetype udev udisks unicode upower usb uxa vaapi vim-syntax vorbis widgets wifi wxwidgets x264 xattr xcb xml xpm xv xvid zlib" ABI_X86="64" ADA_TARGET="gnat_2019" ALSA_CARDS="hda-intel usb-audio" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 f16c fma3 mmx mmxext pclmul popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput wacom synaptics joystick" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LLVM_TARGETS="x86 BPF" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-3 php7-4" POSTGRES_TARGETS="postgres12 postgres13" PYTHON_SINGLE_TARGET="python3_9" PYTHON_TARGETS="python3_9" QEMU_SOFTMMU_TARGETS="x86_64 arm aarch64" QEMU_USER_TARGETS="x86_64 arm aarch64" RUBY_TARGETS="ruby26 ruby27 ruby30" SANE_BACKENDS="plustek pixma" USERLAND="GNU" VIDEO_CARDS="intel i965 iris" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RUSTFLAGS
Comment 2 Larry the Git Cow gentoo-dev 2022-02-04 18:05:55 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=53a4bce277d2eeee57502bae52c801d828586e4e

commit 53a4bce277d2eeee57502bae52c801d828586e4e
Author:     Zac Medico <zmedico@gentoo.org>
AuthorDate: 2022-02-04 18:05:08 +0000
Commit:     Zac Medico <zmedico@gentoo.org>
CommitDate: 2022-02-04 18:05:56 +0000

    dev-python/agate: accept parsedatetime-2.6
    
    Closes: https://bugs.gentoo.org/815178
    Package-Manager: Portage-3.0.30, Repoman-3.0.3
    Signed-off-by: Zac Medico <zmedico@gentoo.org>

 dev-python/agate/{agate-1.6.3-r1.ebuild => agate-1.6.3-r2.ebuild} | 7 ++++++-
 1 file changed, 6 insertions(+), 1 deletion(-)
Comment 3 Zac Medico gentoo-dev 2022-02-04 18:06:55 UTC
Thanks!