Build fails with the following problems: * Package: sys-cluster/slurm-20.11.0.1-r101 * Repository: gentoo * Maintainer: alexxy@gentoo.org cluster@gentoo.org * USE: X abi_x86_64 amd64 elibc_glibc hdf5 kernel_linux lua_single_target_lua5-1 munge pam userland_GNU * FEATURES: compressdebug network-sandbox preserve-libs sandbox splitdebug userpriv usersandbox [...] checking for h5cc... /usr/sbin/h5cc checking for HDF5 type... serial checking for HDF5 libraries... ^[[01m^[[Kx86_64-pc-linux-gnu-gcc:^[[m^[[K ^[[01;31m^[[Kerror: ^[[m^[[Kunrecognized command-line option '^[[01m^[[K-show^[[m^[[K' ^[[01m^[[Kx86_64-pc-linux-gnu-gcc:^[[m^[[K ^[[01;31m^[[Kerror: ^[[m^[[Kunrecognized command-line option '^[[01m^[[K-show^[[m^[[K' ^[[01m^[[Kx86_64-pc-linux-gnu-gcc:^[[m^[[K ^[[01;31m^[[Kerror: ^[[m^[[Kunrecognized command-line option '^[[01m^[[K-showconfig^[[m^[[K'; did you mean '^[[01m^[[K-mpconfig^[[m^[[K'? ^[[01m^[[Kx86_64-pc-linux-gnu-gcc:^[[m^[[K ^[[01;31m^[[Kerror: ^[[m^[[Kunrecognized command-line option '^[[01m^[[K-showconfig^[[m^[[K'; did you mean '^[[01m^[[K-mpconfig^[[m^[[K'? ^[[01m^[[Kx86_64-pc-linux-gnu-gcc:^[[m^[[K ^[[01;31m^[[Kerror: ^[[m^[[Kunrecognized command-line option '^[[01m^[[K-showconfig^[[m^[[K'; did you mean '^[[01m^[[K-mpconfig^[[m^[[K'? yes (version ) checking for hdf5.h... no checking for H5Fcreate in -lhdf5... no configure: WARNING: Unable to compile HDF5 test program checking for main in -lhdf5_hl... no checking for matching HDF5 Fortran wrapper... /usr/sbin/h5fc Package hdf5-1.12.1 was not found in the pkg-config search path. Perhaps you should add the directory containing `hdf5-1.12.1.pc' to the PKG_CONFIG_PATH environment variable Package 'hdf5-1.12.1', required by 'hdf5_fortran', not found ^[[01m^[[Kx86_64-pc-linux-gnu-gfortran:^[[m^[[K ^[[01;31m^[[Kerror: ^[[m^[[Kunrecognized command-line option '^[[01m^[[K-show^[[m^[[K' ^[[01m^[[Kx86_64-pc-linux-gnu-gfortran:^[[m^[[K ^[[01;31m^[[Kfatal error: ^[[m^[[Kno input files compilation terminated. [...] >>> Compiling source in /tmp/portage/sys-cluster/slurm-20.11.0.1-r101/work/slurm-slurm-20-11-0-1 ... make --jobs=9 --load-average=12 Makefile:295: *** missing separator. Stop. Building without the hdf5 USE flag succeeds. Reproducible: Always
Created attachment 740154 [details] build log
Created attachment 740157 [details] emerge --info
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b372f20dd03c96d59ee2ef978d76ef174a026ad7 commit b372f20dd03c96d59ee2ef978d76ef174a026ad7 Author: Sam James <sam@gentoo.org> AuthorDate: 2021-10-12 07:05:57 +0000 Commit: Sam James <sam@gentoo.org> CommitDate: 2021-10-12 07:05:57 +0000 sys-cluster/slurm: add < dep on hdf5lib for now Bug: https://bugs.gentoo.org/813924 Signed-off-by: Sam James <sam@gentoo.org> .../slurm/{slurm-20.11.0.1-r101.ebuild => slurm-20.11.0.1-r102.ebuild} | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-)
This should be fixed now. Latest hdf5 ebuild has been switched back to autotools (from cmake) by Sam. For some reason, when building hdf5 with cmake, it installs a massively gimped version of h5cc, that breaks slurms configure setup.
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=aa5804fc23f73e7208b06102845271edf0e8f2cc commit aa5804fc23f73e7208b06102845271edf0e8f2cc Author: Sam James <sam@gentoo.org> AuthorDate: 2022-06-26 06:55:16 +0000 Commit: Sam James <sam@gentoo.org> CommitDate: 2022-06-26 07:02:33 +0000 sys-cluster/slurm: unpin hdf5 dep; fix MissingUseDepDefault We've ported back to autotools in hdf5 for now. Bug: https://github.com/HDFGroup/hdf5/issues/1814 Closes: https://bugs.gentoo.org/813924 Signed-off-by: Sam James <sam@gentoo.org> sys-cluster/slurm/slurm-20.11.0.1-r105.ebuild | 275 ++++++++++++++++++++++++++ 1 file changed, 275 insertions(+)
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=17ff95cbd567ac4c724a2e6fb29e2a33c751d52f commit 17ff95cbd567ac4c724a2e6fb29e2a33c751d52f Author: Michał Górny <mgorny@gentoo.org> AuthorDate: 2025-04-23 08:27:47 +0000 Commit: Michał Górny <mgorny@gentoo.org> CommitDate: 2025-04-23 08:29:42 +0000 sys-cluster/slurm: Remove obsolete sci-libs/hdf5 pin Remove the pin on sci-libs/hdf5, that was added due to a buggy CMake port of that package, but was not removed when the package reverted to autotools. That said, upstream fixed the relevant issues and the package builds fine with my WIP CMake port. Bug: https://bugs.gentoo.org/813924 Signed-off-by: Michał Górny <mgorny@gentoo.org> .../slurm/{slurm-22.05.11.ebuild => slurm-22.05.11-r1.ebuild} | 5 ++--- sys-cluster/slurm/{slurm-24.05.3.ebuild => slurm-24.05.3-r1.ebuild} | 5 ++--- 2 files changed, 4 insertions(+), 6 deletions(-)
