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Bug 782238 - dev-python/h5py-3.2.1 fails test TestOffsets.test_float_round_tripping: AttributeError: module 'numpy' has no attribute 'float128'
Summary: dev-python/h5py-3.2.1 fails test TestOffsets.test_float_round_tripping: Attri...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: x86 Linux
: Normal normal
Assignee: Python Gentoo Team
URL:
Whiteboard:
Keywords: TESTFAILURE
Depends on:
Blocks: 781776
  Show dependency tree
 
Reported: 2021-04-11 19:51 UTC by Thomas Deutschmann (RETIRED)
Modified: 2021-04-12 10:13 UTC (History)
3 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,135.52 KB, text/plain)
2021-04-11 19:51 UTC, Thomas Deutschmann (RETIRED)
Details

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Description Thomas Deutschmann (RETIRED) gentoo-dev 2021-04-11 19:51:22 UTC
> =============================================== short test summary info ================================================
> FAILED h5py/tests/test_dtype.py::TestOffsets::test_float_round_tripping - AttributeError: module 'numpy' has no attri...
> ========================= 1 failed, 647 passed, 24 skipped, 3 deselected, 8 warnings in 8.64s ==========================
>  * ERROR: dev-python/h5py-3.2.1::gentoo failed (test phase):
>  *   Tests failed with python3.8
> 


Portage 3.0.17 (python 3.8.8-final-0, default/linux/x86/17.0, gcc-10.2.0, glibc-2.32-r7, 5.10.27-gentoo-x86 i686)
=================================================================
System uname: Linux-5.10.27-gentoo-x86-i686-with-glibc2.1.3
KiB Mem:     3100632 total,    961504 free
KiB Swap:    8387560 total,   8376464 free
Timestamp of repository gentoo: Sun, 11 Apr 2021 18:37:20 +0000
Head commit of repository gentoo: 79e998b926c6b640e725d6618c8044f07ccbbb37

sh bash 5.0_p18
ld GNU ld (Gentoo 2.35.2 p1) 2.35.2
ccache version 4.2 [enabled]
app-shells/bash:          5.0_p18::gentoo
dev-lang/perl:            5.30.3::gentoo
dev-lang/python:          2.7.18_p8::gentoo, 3.8.8_p1::gentoo, 3.9.2_p1::gentoo
dev-lang/rust:            1.47.0-r2::gentoo
dev-util/ccache:          4.2::gentoo
dev-util/cmake:           3.18.5::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.7::gentoo
sys-apps/openrc:          0.42.1-r1::gentoo
sys-apps/sandbox:         2.20::gentoo
sys-devel/autoconf:       2.13-r1::gentoo, 2.69-r5::gentoo
sys-devel/automake:       1.16.2-r1::gentoo
sys-devel/binutils:       2.35.2::gentoo
sys-devel/gcc:            10.2.0-r5::gentoo
sys-devel/gcc-config:     2.4::gentoo
sys-devel/libtool:        2.4.6-r6::gentoo
sys-devel/make:           4.3::gentoo
sys-kernel/linux-headers: 5.10::gentoo (virtual/os-headers)
sys-libs/glibc:           2.32-r7::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/repo/sync/gentoo.git
    priority: -1000

ABI="x86"
ABI_X86="32"
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="*"
ACCEPT_PROPERTIES="*"
ACCEPT_RESTRICT="*"
ADA_TARGET="gnat_2018"
ARCH="x86"
BINPKG_COMPRESS="bzip2"
BROOT=""
CBUILD="i686-pc-linux-gnu"
CCACHE_DIR="/var/cache/ccache"
CFLAGS="-O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare"
CHOST="i686-pc-linux-gnu"
CHOST_x86="i686-pc-linux-gnu"
COLLISION_IGNORE="/lib/modules/*"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt"
CPU_FLAGS_X86="mmx mmxext sse sse2"
CXXFLAGS="-O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare"
DEFAULT_ABI="x86"
EDITOR="/usr/bin/mcedit"
ELIBC="glibc"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
EPREFIX=""
EROOT="/"
ESYSROOT="/"
FCFLAGS="-O2 -march=i686 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg ccache cgroup config-protect-if-modified distlocks downgrade-backup ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -march=i686 -pipe"
GCC_SPECS=""
GRUB_PLATFORMS="efi-32 pc"
GSETTINGS_BACKEND="dconf"
HOME="/root"
INFOPATH="/usr/share/gcc-data/i686-pc-linux-gnu/10.2.0/info:/usr/share/binutils-data/i686-pc-linux-gnu/2.35.2/info:/usr/share/info"
INPUT_DEVICES="libinput"
IUSE_IMPLICIT="abi_x86_32 prefix prefix-guest prefix-stack"
KERNEL="linux"
L10N="en en-US de de-DE"
LANG="en_US.UTF-8"
LC_MESSAGES="C"
LC_PAPER="de_DE.UTF-8"
LC_TIME="en_GB.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LIBDIR_x86="lib"
LINGUAS="en de"
LOGNAME="root"
LUA_SINGLE_TARGET="lua5-1"
LUA_TARGETS="lua5-1"
MAIL="/var/mail/root"
MAKEOPTS="--jobs 5 --load-average 7.95"
MANPAGER="manpager"
MOTD_SHOWN="pam"
MULTILIB_ABIS="x86"
NOCOLOR="true"
OFFICE_IMPLEMENTATION="libreoffice"
OLDPWD="/root"
OPENCL_PROFILE="ocl-icd"
OPENGL_PROFILE="xorg-x11"
PAGER="/usr/bin/less"
PATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/lib/llvm/11/bin"
PHP_TARGETS="php7-3 php7-4"
POSTGRES_TARGETS="postgres10 postgres11"
PWD="/tmp/stable"
PYTHONDONTWRITEBYTECODE="1"
PYTHON_SINGLE_TARGET="python3_8"
PYTHON_TARGETS="python3_8"
QT_GRAPHICSSYSTEM="raster"
ROOT="/"
ROOTPATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/lib/llvm/11/bin"
RUBY_TARGETS="ruby25 ruby26"
SHELL="/bin/bash"
SHLVL="2"
SSH_TTY="/dev/pts/0"
SYSROOT="/"
TERM="tmux-256color"
TMUX="/tmp/tmux-0/default,3341,0"
TMUX_PANE="%2"
TWISTED_DISABLE_WRITING_OF_PLUGIN_CACHE="1"
USER="root"
USERLAND="GNU"
VIDEO_CARDS="vmware"
XDG_CONFIG_DIRS="/etc/xdg"
XDG_DATA_DIRS="/usr/local/share:/usr/share"
XDG_RUNTIME_DIR="/run/user/0"
XDG_SESSION_CLASS="user"
XDG_SESSION_ID="1"
XDG_SESSION_TYPE="tty"
Comment 1 Thomas Deutschmann (RETIRED) gentoo-dev 2021-04-11 19:51:48 UTC
Created attachment 699315 [details]
build.log
Comment 2 Thomas Deutschmann (RETIRED) gentoo-dev 2021-04-11 19:53:42 UTC
dev-python/numpy-1.19.5 is installed.
Comment 3 Larry the Git Cow gentoo-dev 2021-04-12 10:13:46 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=61beab47461cbaf2f2467d25eb9808583c34f84a

commit 61beab47461cbaf2f2467d25eb9808583c34f84a
Author:     Michał Górny <mgorny@gentoo.org>
AuthorDate: 2021-04-12 10:13:17 +0000
Commit:     Michał Górny <mgorny@gentoo.org>
CommitDate: 2021-04-12 10:13:17 +0000

    dev-python/h5py: Fix skipping inconvenient types on x86
    
    Closes: https://bugs.gentoo.org/782238
    Signed-off-by: Michał Górny <mgorny@gentoo.org>

 dev-python/h5py/files/h5py-3.2.1-i686-types.patch | 55 +++++++++++++++++++++++
 dev-python/h5py/h5py-3.2.1.ebuild                 |  4 ++
 2 files changed, 59 insertions(+)