Created attachment 690237 [details] mdds-1.7.0:20210309-140754.log.gz PASS: multi_type_matrix_test_walk PASS: multi_type_matrix_test PASS: flat_segment_tree_test PASS: multi_type_vector_test_collection PASS: point_quad_tree_test PASS: rectangle_set_test PASS: segment_tree_test PASS: sorted_string_map_test PASS: trie_map_test FAIL: rtree_test PASS: rtree_test_bulkload PASS: multi_type_vector_test_custom PASS: multi_type_vector_test_event PASS: multi_type_vector_test_default PASS: ref_pair_test ============================================================================ Testsuite summary for mdds 1.7.0 ============================================================================ # TOTAL: 15 # PASS: 14 # SKIP: 0 # XFAIL: 0 # FAIL: 1 # XPASS: 0 # ERROR: 0 ============================================================================ See ./test-suite.log Please report to kohei.yoshida@gmail.com ============================================================================ make[3]: *** [Makefile:1144: test-suite.log] Error 1 make[3]: Leaving directory '/var/tmp/portage/dev-util/mdds-1.7.0/work/mdds-1.7.0' make[2]: *** [Makefile:1252: check-TESTS] Error 2 make[2]: Leaving directory '/var/tmp/portage/dev-util/mdds-1.7.0/work/mdds-1.7.0' make[1]: *** [Makefile:1586: check-am] Error 2 make[1]: Leaving directory '/var/tmp/portage/dev-util/mdds-1.7.0/work/mdds-1.7.0' make: *** [Makefile:1029: check-recursive] Error 1 * ERROR: dev-util/mdds-1.7.0::gentoo failed (test phase): * Make check failed. See above for details. File test-suite.log says: ::rtree_test_erase_directories: --end (duration: 0.000390768 sec) Test failed: The parent node pointer does not point to the real parent. (expected: 0x327460; stored in node: 0x327430) FAIL rtree_test (exit status: 1) # emerge --info =dev-util/mdds-1.7.0 Portage 3.0.13 (python 3.8.7-final-0, default/linux/amd64/17.1/desktop/plasma/systemd, gcc-9.3.0, glibc-2.32-r7, 5.10.18-gentoo x86_64) ================================================================= System Settings ================================================================= System uname: Linux-5.10.18-gentoo-x86_64-Intel-R-_Core-TM-_i5-8400_CPU_@_2.80GHz-with-glibc2.2.5 KiB Mem: 16055264 total, 186916 free KiB Swap: 16777212 total, 8376828 free Timestamp of repository gentoo: Mon, 08 Mar 2021 12:30:01 +0000 Head commit of repository gentoo: f9a6bc3e06b1f79945c7f31f76d25082a8dfaa4f sh dash 0.5.11.3-r1 ld GNU gold (Gentoo 2.35.1 p2 2.35.1) 1.16 distcc 3.3.3 x86_64-pc-linux-gnu [disabled] ccache version 4.1 [disabled] app-shells/bash: 5.0_p18::gentoo dev-java/java-config: 2.3.1::gentoo dev-lang/perl: 5.30.3::gentoo dev-lang/python: 2.7.18-r6::gentoo, 3.8.7-r1::gentoo, 3.9.1-r1::gentoo dev-util/ccache: 4.1::gentoo dev-util/cmake: 3.18.5::gentoo sys-apps/baselayout: 2.7::gentoo sys-apps/sandbox: 2.20::gentoo sys-devel/autoconf: 2.13-r1::gentoo, 2.69-r5::gentoo sys-devel/automake: 1.16.2-r1::gentoo sys-devel/binutils: 2.35.1-r1::gentoo sys-devel/gcc: 9.3.0-r2::gentoo, 10.2.0-r5::gentoo sys-devel/gcc-config: 2.3.3::gentoo sys-devel/libtool: 2.4.6-r6::gentoo sys-devel/make: 4.3::gentoo sys-kernel/linux-headers: 5.10::gentoo (virtual/os-headers) sys-libs/glibc: 2.32-r7::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 sync-rsync-verify-metamanifest: yes sync-rsync-verify-jobs: 1 sync-rsync-verify-max-age: 24 sync-rsync-extra-opts: x-portage location: /usr/local/portage masters: gentoo priority: 0 ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe -frecord-gcc-switches -march=skylake -mabm -ftree-vectorize -flto=6" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-O2 -pipe -frecord-gcc-switches -march=skylake -mabm -ftree-vectorize -flto=6" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="--keep-going y --with-bdeps y" ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" FCFLAGS="-O2 -pipe -frecord-gcc-switches -march=skylake -mabm -ftree-vectorize -flto=6" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs cgroup compress-build-logs config-protect-if-modified distlocks ebuild-locks ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-elog split-log strict strict-keepdir test unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe -frecord-gcc-switches -march=skylake -mabm -ftree-vectorize -flto=6" GENTOO_MIRRORS="http://mirror.leaseweb.com/gentoo/ http://mirror.netcologne.de/gentoo/ http://ftp.halifax.rwth-aachen.de/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/" LANG="it_IT.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,--sort-common -ftree-vectorize -flto=6" LINGUAS="it it_IT" MAKEOPTS="-j7 -l6" PKGDIR="/var/cache/binpkgs" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="X a52 aac aalib acl acpi activities adns alsa amd64 ao audiofile bash-completion bluetooth branding brotli bzip2 cairo caps cdda cddb cdparanoia cdr cli crypt css cups curl dbus declarative dga djvu dri dts dvd dvdr emboss encode exif expat fbcon ffmpeg fftw flac fontconfig foomaticdb fortran ftp gd gdbm geoip gif gimp gmp gnutls gphoto2 gpm graphviz gtk gui handbook iconv icu idn imagemagick imlib introspection ipv6 java javascript jbig jemalloc jpeg jpeg2k kde kipi kwallet lame lcms libass libglvnd libnotify libsamplerate libtirpc lm_sensors lua lzma lzo mad mmap mng mp3 mp4 mpeg mplayer multilib musicbrainz ncurses nls nptl nsplugin offensive ogg openal opengl openmp pam pango pcre pdf phonon plasma png policykit postscript ppds pulseaudio qml qt5 rdesktop readline recode samba sctp sdl seccomp sndfile sockets speex spell split-usr sqlite ssl startup-notification svg symlink syslog systemd sysvipc taglib telemetry test theora threads tidy tiff truetype udev udisks unicode upower usb vaapi vala verify-sig vim-syntax vnc vorbis wavpack wayland widgets win32codecs wmf wxwidgets x264 xattr xcb xine xml xpm xscreensaver xv xvid yahoo zlib zstd" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="hda-intel virmidi" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 f16c fma3 mmx mmxext pclmul popcnt rdrand sse sse2 sse3 sse4_1 sse4_2 ssse3" CURL_SSL="gnutls" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput" KERNEL="linux" L10N="it en" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-3 php7-4" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_8" PYTHON_TARGETS="python3_8" RUBY_TARGETS="ruby26" USERLAND="GNU" VIDEO_CARDS="intel i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS # emerge -1pqv =dev-util/mdds-1.7.0 [ebuild R ] dev-util/mdds-1.7.0 USE="openmp test -doc -valgrind" Real *FLAGS are: CFLAGS="-O2 -pipe -frecord-gcc-switches -march=skylake -ftree-vectorize -flto=thin" CXXFLAGS="-O2 -pipe -frecord-gcc-switches -march=skylake -ftree-vectorize -flto=thin" LDFLAGS="-Wl,-O2 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,--sort-common -ftree-vectorize -fuse-ld=lld -flto=thin" # equery -q l -F \$cpv clang llvm lld sys-devel/clang-11.0.1 sys-devel/llvm-11.0.1 sys-devel/lld-11.0.1
Created attachment 690240 [details] test-suite.log
I had a similar compilation failure, I tried with -openmp and it compiled fine.
I don't have a systemwire-clang image and not planning to have one, it would make sense to contact upstream about it.
I've given up as well with system-wide clang. You may close this, if you wish.
This is unrelated to clang as such and in fact caused by the use of the libc++ standard library. I've opened a ticket upstream here https://gitlab.com/mdds/mdds/-/issues/66 where I detail that using the gcc and libc++ combination produces the exact same issue
This has now been fixed upstream via https://gitlab.com/mdds/mdds/-/commit/7ab81002fe127d16602b85b391c1d1b0422a9afd This patch should be cherry-picked
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=39c12693d5372029f54a3b853179bf4c7fada1c3 commit 39c12693d5372029f54a3b853179bf4c7fada1c3 Author: Andreas Sturmlechner <asturm@gentoo.org> AuthorDate: 2021-06-17 12:45:37 +0000 Commit: Andreas Sturmlechner <asturm@gentoo.org> CommitDate: 2021-06-17 12:47:17 +0000 dev-util/mdds: Fix rtree_test See also: https://gitlab.com/mdds/mdds/-/issues/66 Upstream commit 7ab81002fe127d16602b85b391c1d1b0422a9afd Thanks-to: Paul Mulders <justinkb@gmail.com> Closes: https://bugs.gentoo.org/775056 Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org> dev-util/mdds/files/mdds-1.7.0-rtree_test.patch | 52 +++++++++++++++++++++++++ dev-util/mdds/mdds-1.7.0.ebuild | 3 +- 2 files changed, 54 insertions(+), 1 deletion(-)
