https://blogs.gentoo.org/ago/2020/07/04/gentoo-tinderbox/ Issue: sci-libs/avogadrolibs-1.93.0 fails to compile. Discovered on: amd64 (internal ref: ci)
Created attachment 683416 [details] build.log build log and emerge --info
Possible context of error(s): spacegrouptest.cpp:(.text+0x566): undefined reference to `Avogadro::Core::AvoSpglib::getHallNumber(Avogadro::Core::Molecule const&, double)' spacegrouptest.cpp:(.text+0x1f60): undefined reference to `Avogadro::Core::AvoSpglib::reduceToPrimitive(Avogadro::Core::Molecule&, double)' spacegrouptest.cpp:(.text+0x3540): undefined reference to `Avogadro::Core::AvoSpglib::conventionalizeCell(Avogadro::Core::Molecule&, double)' spacegrouptest.cpp:(.text+0x3ae2): undefined reference to `Avogadro::Core::AvoSpglib::getHallNumber(Avogadro::Core::Molecule const&, double)' /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: spacegrouptest.cpp:(.text+0x3e29): undefined reference to `Avogadro::Core::AvoSpglib::getHallNumber(Avogadro::Core::Molecule const&, double)' /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: spacegrouptest.cpp:(.text+0x468d): undefined reference to `Avogadro::Core::AvoSpglib::getHallNumber(Avogadro::Core::Molecule const&, double)' spacegrouptest.cpp:(.text+0x52b3): undefined reference to `Avogadro::Core::AvoSpglib::getHallNumber(Avogadro::Core::Molecule const&, double)' collect2: error: ld returned 1 exit status
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b9e6d8c7a9ee81fc5e72043d1b3ed399ae8273fd commit b9e6d8c7a9ee81fc5e72043d1b3ed399ae8273fd Author: David Seifert <soap@gentoo.org> AuthorDate: 2022-03-01 12:12:25 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2022-03-01 12:12:25 +0000 sci-libs/avogadrolibs: drop 1.93.0 Closes: https://bugs.gentoo.org/765811 Closes: https://bugs.gentoo.org/810505 Closes: https://bugs.gentoo.org/820767 Closes: https://bugs.gentoo.org/834116 Signed-off-by: David Seifert <soap@gentoo.org> sci-libs/avogadrolibs/Manifest | 2 - sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild | 95 ---------------------- ...vogadrolibs-1.93.0-fix_AvogadroLibsConfig.patch | 11 --- 3 files changed, 108 deletions(-) Additionally, it has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=68245b30229ce2756c08706b5b075fd0422a40d8 commit 68245b30229ce2756c08706b5b075fd0422a40d8 Author: David Seifert <soap@gentoo.org> AuthorDate: 2022-03-01 12:12:24 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2022-03-01 12:12:24 +0000 sci-libs/avogadrolibs: add 1.95.1 Bug: https://bugs.gentoo.org/765811 Bug: https://bugs.gentoo.org/834116 Signed-off-by: David Seifert <soap@gentoo.org> sci-libs/avogadrolibs/Manifest | 4 + sci-libs/avogadrolibs/avogadrolibs-1.95.1.ebuild | 89 ++++++++++++++++++++++ .../files/avogadrolibs-1.95.1-tests.patch | 13 ++++ 3 files changed, 106 insertions(+)
