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Bug 741741 - sci-libs/silo-4.10.2-r1 : collect2: error: ld returned 1 exit status
Summary: sci-libs/silo-4.10.2-r1 : collect2: error: ld returned 1 exit status
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Cluster Team
URL:
Whiteboard:
Keywords: PullRequest
Depends on:
Blocks:
 
Reported: 2020-09-12 06:59 UTC by Toralf Förster
Modified: 2022-01-17 15:08 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge-info.txt (emerge-info.txt,15.92 KB, text/plain)
2020-09-12 06:59 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,88.02 KB, text/plain)
2020-09-12 06:59 UTC, Toralf Förster
Details
environment (environment,80.43 KB, text/plain)
2020-09-12 06:59 UTC, Toralf Förster
Details
etc.portage.tbz2 (etc.portage.tbz2,24.49 KB, application/x-bzip)
2020-09-12 06:59 UTC, Toralf Förster
Details
logs.tbz2 (logs.tbz2,14.11 KB, application/x-bzip)
2020-09-12 06:59 UTC, Toralf Förster
Details
sci-libs:silo-4.10.2-r1:20200912-014733.log (sci-libs:silo-4.10.2-r1:20200912-014733.log,261.73 KB, text/plain)
2020-09-12 06:59 UTC, Toralf Förster
Details
temp.tbz2 (temp.tbz2,31.48 KB, application/x-bzip)
2020-09-12 06:59 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2020-09-12 06:59:05 UTC
libtool: link: x86_64-pc-linux-gnu-gcc -shared  .libs/silo_version.o  -Wl,--whole-archive score/.libs/libsilo_score.a pdb/.libs/libsilo_pdb.a silo/.libs/libsilo_silo.a debug/.libs/libsilo_debug.a netcdf/.libs/libsilo_netcdf.a pdb_drv/.libs/libsilo_pdb_drv.a taurus/.libs/libsilo_taurus.a hzip/.libs/libsilo_hzip.a fpzip/.libs/libsilo_fpzip.a unknown/.libs/libsilo_unknown.a filters/.libs/libsilo_filters.a -Wl,--no-whole-archive  -L/usr/gapps/silo/szip/2.1/i386-pc-linux-gcc-3.2.3/lib -lz -lm -lsz  -march=native -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0   -Wl,-soname -Wl,libsilo.so -o .libs/libsilo.so
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: error: cannot find -lsz
collect2: error: ld returned 1 exit status
make[4]: *** [Makefile:512: libsilo.la] Error 1
make[4]: Leaving directory '/var/tmp/portage/sci-libs/silo-4.10.2-r1/work/silo-4.10.2/src'
make[3]: *** [Makefile:559: all-recursive] Error 1

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.1_desktop-abi32+64-20200908-071541

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-7.3.1
 [2] x86_64-pc-linux-gnu-10.2.0 *
clang version 10.0.1 
Target: x86_64-pc-linux-gnu
Thread model: posix
InstalledDir: /usr/lib/llvm/10/bin
/usr/lib/llvm/10
10.0.1
Available Python interpreters, in order of preference:
  [1]   python3.7
  [2]   python3.9 (fallback)
  [3]   python3.8 (fallback)
  [4]   python2.7 (fallback)
Available Ruby profiles:
  [1]   ruby25 (with Rubygems) *
Available Rust versions:
  [1]   rust-1.46.0 *
The following VMs are available for generation-2:
*)	IcedTea JDK 3.16.0 [icedtea-bin-8]
Available Java Virtual Machines:
  [1]   icedtea-bin-8  system-vm

The Glorious Glasgow Haskell Compilation System, version 8.8.4

  timestamp(s) of HEAD at this tinderbox image:
/var/db/repos/gentoo	Sat Sep 12 12:05:34 AM UTC 2020

emerge -qpvO sci-libs/silo
[ebuild  N    ] sci-libs/silo-4.10.2-r1  USE="qt5 silex -hdf5 -static-libs -test"
Comment 1 Toralf Förster gentoo-dev 2020-09-12 06:59:06 UTC
Created attachment 659568 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2020-09-12 06:59:08 UTC
Created attachment 659571 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2020-09-12 06:59:09 UTC
Created attachment 659574 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2020-09-12 06:59:11 UTC
Created attachment 659577 [details]
etc.portage.tbz2
Comment 5 Toralf Förster gentoo-dev 2020-09-12 06:59:12 UTC
Created attachment 659580 [details]
logs.tbz2
Comment 6 Toralf Förster gentoo-dev 2020-09-12 06:59:14 UTC
Created attachment 659583 [details]
sci-libs:silo-4.10.2-r1:20200912-014733.log
Comment 7 Toralf Förster gentoo-dev 2020-09-12 06:59:15 UTC
Created attachment 659586 [details]
temp.tbz2
Comment 8 Larry the Git Cow gentoo-dev 2022-01-17 15:08:09 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b94b2e74ac6995dd71878af8a21959dcd8e86818

commit b94b2e74ac6995dd71878af8a21959dcd8e86818
Author:     Marco Scardovi <marco@scardovi.com>
AuthorDate: 2022-01-15 20:10:03 +0000
Commit:     Jakov Smolić <jsmolic@gentoo.org>
CommitDate: 2022-01-17 15:07:52 +0000

    sci-libs/silo: revbump to -r1 and add test again
    
    See https://github.com/LLNL/Silo/issues/236 for test
    
    Closes: https://bugs.gentoo.org/656432
    Closes: https://bugs.gentoo.org/718702
    Closes: https://bugs.gentoo.org/741741
    
    Package-Manager: Portage-3.0.30, Repoman-3.0.3
    Signed-off-by: Marco Scardovi <marco@scardovi.com>
    Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>

 sci-libs/silo/silo-4.11-r1.ebuild | 53 +++++++++++++++++++++++++++++++++++++++
 1 file changed, 53 insertions(+)