Added in to portage today, dev-db/mariadb-10.4.13 fails to emerge if you have mysql-connector installed, because of: * Detected file collision(s): * * /usr/share/man/man1/perror.1.bz2 * * Searching all installed packages for file collisions... * * Press Ctrl-C to Stop * * dev-db/mysql-connector-c-8.0.20:0::gentoo * /usr/share/man/man1/perror.1.bz2 Reproducible: Always Portage 2.3.99 (python 3.8.3-final-0, default/linux/amd64/17.1/hardened, gcc-10.1.0, glibc-2.31-r3, 5.6.14-gentoo x86_64) ================================================================= System uname: Linux-5.6.14-gentoo-x86_64-Intel-R-_Xeon-R-_CPU_X5670_@_2.93GHz-with-glibc2.2.5 KiB Mem: 12268492 total, 3997340 free KiB Swap: 16777684 total, 16776916 free Timestamp of repository gentoo: Sat, 23 May 2020 13:05:34 +0000 Head commit of repository gentoo: e02c23db1a268890fbbe7b9cf83b607cb38ab851 sh bash 5.0_p17 ld GNU ld (Gentoo 2.34 p4) 2.34.0 app-shells/bash: 5.0_p17::gentoo dev-lang/perl: 5.30.2-r2::gentoo dev-lang/python: 3.8.3::gentoo dev-util/cmake: 3.17.2::gentoo dev-util/pkgconfig: 0.29.2::gentoo sys-apps/baselayout: 2.7::gentoo sys-apps/openrc: 0.42.1::gentoo sys-apps/sandbox: 2.18::gentoo sys-devel/autoconf: 2.69-r5::gentoo sys-devel/automake: 1.16.2::gentoo sys-devel/binutils: 2.34-r1::gentoo sys-devel/gcc: 10.1.0::gentoo sys-devel/gcc-config: 2.3::gentoo sys-devel/libtool: 2.4.6-r6::gentoo sys-devel/make: 4.3::gentoo sys-kernel/linux-headers: 5.6::gentoo (virtual/os-headers) sys-libs/glibc: 2.31-r3::gentoo Repositories: gentoo location: /var/db/repos/gentoo sync-type: git sync-uri: https://github.com/gentoo-mirror/gentoo.git priority: -1000 sync-git-verify-commit-signature: true local location: /var/db/repos/local masters: gentoo ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -pipe -O3 -fomit-frame-pointer" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /etc/stunnel/stunnel.conf /usr/share/gnupg/qualified.txt /var/bind" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php7.4/ext-active/ /etc/php/cgi-php7.4/ext-active/ /etc/php/cli-php7.4/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-march=native -pipe -O3 -fomit-frame-pointer" DISTDIR="/var/cache/distfiles" ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" FCFLAGS="-march=native -pipe -O3 -fomit-frame-pointer" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch parallel-install pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-march=native -pipe -O3 -fomit-frame-pointer" GENTOO_MIRRORS="https://mirror.netcologne.de/gentoo/ https://ftp.halifax.rwth-aachen.de/gentoo/ https://mirror.yandex.ru/gentoo-distfiles/" LANG="sl_SI.utf8" LDFLAGS="-Wl,-O3 -Wl,--as-needed -Wl,--sort-common -Wl,--hash-style=gnu" LINGUAS="en sl" MAKEOPTS="-j12 -l12" PKGDIR="/var/cache/binpkgs" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="acl acpi amd64 apache2 apng berkdb bittorrent bzip2 caps cgi cli client corefonts cracklib crypt curl dhcp dlz dovecot-sasl eap exif expat experimental extraengine fontconfig ftp gd gdbm glib gmp gssapi gzip hardened http2 iconv icu idn intl iptables ipv6 ithreads jpeg kerberos lcms libtirpc lz4 lzma lzo managesieve mp3 multilib mysql mysqli ncurses nls nping nptl openmp openssl pam pci pcntl pcre pcre16 pcre32 pdo perl pie png posix python rar readline rpc rtmp ruby samba seccomp server session sieve slang smtp soap sockets socks5 split-usr sqlite ssh ssl ssp suexec svg tcpd threads tiff tracepath truetype udev unicode urandom usb vhosts webui x264 x265 xattr xml xmlreader xmlrpc xmlwriter xslt xtpax xvid xz zip zlib zstd" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias authn_dbd authn_socache authz_dbd cache_socache dbd http2 proxy proxy_html proxy_http proxy_http2 proxy_wstunnel xml2enc" APACHE2_MPMS="event" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes mmx mmxext pclmul popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput" KERNEL="linux" L10N="en sl" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-4" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_8" PYTHON_TARGETS="python3_8" RUBY_TARGETS="ruby27" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy v4l" XTABLES_ADDONS="geoip" Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Created attachment 641154 [details] build.log had go gzip it
Just fixed via https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a2fd815cdb09de08a302b80746fd40c65d30d69e Please re-sync.
Afaict, the error is still there - I synced via git and checked there is PATCH_SET="https://dev.gentoo.org/~whissi/dist/${PN}/${PN}-10.4.13-patches-02.tar.xz" in the mariadb ebuild (so I have the most recent version for sure) yet I still got the collision
There was 2nd patch: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a69704c313996267099dfa3c72041d003d951b9a it wasnt propagated to gentoo-mirror github when i checked an hour ago, but it seems to be now. Emerging....
Created attachment 641176 [details] build.log after fix Same error, still file colision.
Damn it, patch was working... but only because it made the sed call work again. However, I removed it afterwards (https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a69704c313996267099dfa3c72041d003d951b9a) which re-introduced the problem :/
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=623c75d643cdb582298cccb74fdf9826a862f08c commit 623c75d643cdb582298cccb74fdf9826a862f08c Author: Thomas Deutschmann <whissi@gentoo.org> AuthorDate: 2020-05-23 20:39:36 +0000 Commit: Thomas Deutschmann <whissi@gentoo.org> CommitDate: 2020-05-23 20:40:26 +0000 dev-db/mariadb: update patch set to avoid collision with perror.1 (2) Drop sed call completely. Bug: https://bugs.gentoo.org/724782 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Thomas Deutschmann <whissi@gentoo.org> dev-db/mariadb/Manifest | 8 ++++---- dev-db/mariadb/mariadb-10.1.45.ebuild | 6 +----- dev-db/mariadb/mariadb-10.2.32.ebuild | 6 +----- dev-db/mariadb/mariadb-10.3.23.ebuild | 6 +----- dev-db/mariadb/mariadb-10.4.13.ebuild | 6 +----- 5 files changed, 8 insertions(+), 24 deletions(-)
I can confirm that the last commit does solve this issue. mariadb builds without any problems, seems to run fine. Thanks!
Works now. Ty.
