Bug 695380 – sci-biology/emboss-6.6.0-r1 : ajsql.c:3033:12: error: two or more data types in declaration specifiers

• Status: RESOLVED FIXED
• Product: Gentoo Linux

[Description Toralf Förster 2019-09-22 04:12:58 UTC]

                 from ajsql.c:45:
ajsql.c: In function ‘ajSqlcolumnToBool’:
ajsql.c:3033:12: error: two or more data types in declaration specifiers
 3033 |     AjBool bool = ajFalse;
      |            ^~~~
ajsql.c:3033:17: error: expected identifier or ‘(’ before ‘=’ token

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.1-20190920-192958

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-9.2.0 *

Available Python interpreters, in order of preference:
  [1]   python3.6
  [2]   python2.7 (fallback)
Available Ruby profiles:
  [1]   ruby24 (with Rubygems)
  [2]   ruby25 (with Rubygems) *

java-config:
The following VMs are available for generation-2:
*)	IcedTea JDK 3.13.0 [icedtea-bin-8]
Available Java Virtual Machines:
  [1]   icedtea-bin-8  system-vm

repository timestamp:

==> /var/db/repos/gentoo/metadata/timestamp.chk <==
Sat, 21 Sep 2019 18:52:16 +0000

emerge -qpvO sci-biology/emboss
[ebuild  N    ] sci-biology/emboss-6.6.0-r1  USE="mysql -X -minimal -pdf -png -postgres -static-libs"

[Comment 1 Toralf Förster 2019-09-22 04:13:01 UTC]

Created attachment 590586 [details]
emerge-info.txt

[Comment 2 Toralf Förster 2019-09-22 04:13:04 UTC]

Created attachment 590588 [details]
emerge-history.txt

[Comment 3 Toralf Förster 2019-09-22 04:13:07 UTC]

Created attachment 590590 [details]
environment

[Comment 4 Toralf Förster 2019-09-22 04:13:09 UTC]

Created attachment 590592 [details]
etc.portage.tbz2

[Comment 5 Toralf Förster 2019-09-22 04:13:12 UTC]

Created attachment 590594 [details]
logs.tbz2

[Comment 6 Toralf Förster 2019-09-22 04:13:15 UTC]

Created attachment 590596 [details]
sci-biology:emboss-6.6.0-r1:20190921-205800.log

[Comment 7 Toralf Förster 2019-09-22 04:13:18 UTC]

Created attachment 590598 [details]
temp.tbz2

[Comment 8 David Seifert 2021-08-01 17:05:05 UTC]

*** Bug 803572 has been marked as a duplicate of this bug. ***

[Comment 9 Larry the Git Cow 2021-08-01 18:31:45 UTC]

The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9753c0fb02f9a8c76aeac1e2efd80793cb501416

commit 9753c0fb02f9a8c76aeac1e2efd80793cb501416
Author:     David Seifert <[e-mail]>
AuthorDate: 2021-08-01 18:31:32 +0000
Commit:     David Seifert <[e-mail]>
CommitDate: 2021-08-01 18:31:32 +0000

    sci-biology/emboss: Fix C99 `bool` clash
    
    * Also fix `-Wimplicit-function-declaration`
    
    Closes: https://bugs.gentoo.org/695380
    Signed-off-by: David Seifert <[e-mail]>

 sci-biology/emboss/Manifest                        |   1 +
 sci-biology/emboss/emboss-6.6.0-r1.ebuild          |  14 +-
 .../files/emboss-6.6.0_FORTIFY_SOURCE-fix.patch    |  11 -
 .../files/emboss-6.6.0_fix-build-system.patch      | 411 ---------------------
 .../files/emboss-6.6.0_plplot-declarations.patch   |  61 ---
 .../emboss-6.6.0_qa-implicit-declarations.patch    |  74 ----
 6 files changed, 10 insertions(+), 562 deletions(-)