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Bug 692742 - sci-libs/pastix-5.2.3 : sopalin/.../sopalin_sendrecv.c:1303:12: error: static assertion failed: MPI_Address was removed in MPI-3.0
Summary: sci-libs/pastix-5.2.3 : sopalin/.../sopalin_sendrecv.c:1303:12: error: static...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Related Packages
URL:
Whiteboard:
Keywords:
: 774033 (view as bug list)
Depends on:
Blocks: openmpi-4
  Show dependency tree
 
Reported: 2019-08-22 20:34 UTC by Toralf Förster
Modified: 2022-01-29 00:00 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge-info.txt (emerge-info.txt,16.27 KB, text/plain)
2019-08-22 20:34 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,104.29 KB, text/plain)
2019-08-22 20:34 UTC, Toralf Förster
Details
environment (environment,81.98 KB, text/plain)
2019-08-22 20:34 UTC, Toralf Förster
Details
etc.portage.tbz2 (etc.portage.tbz2,11.13 KB, application/x-bzip)
2019-08-22 20:34 UTC, Toralf Förster
Details
sci-libs:pastix-5.2.3:20190822-202036.log (sci-libs:pastix-5.2.3:20190822-202036.log,259.75 KB, text/plain)
2019-08-22 20:34 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2019-08-22 20:34:10 UTC
                 from sopalin/src/sopalin3d.c:85:
sopalin/src/./sopalin_sendrecv.c: In function ‘po_send_one_fanin’:
sopalin/src/./sopalin_sendrecv.c:1303:12: error: static assertion failed: "MPI_Address was removed in MPI-3.0.  Use MPI_Get_address instead."
 1303 |   CALL_MPI MPI_Address(FANIN_INFOTAB(t),&(thread_data->gtaboffs[packnbr]));
      |            ^~~~~~~~~~~
sopalin/src/./sopalin_sendrecv.c:1305:12: error: static assertion failed: "MPI_Address was removed in MPI-3.0.  Use MPI_Get_address instead."

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.1_desktop_plasma_systemd-abi32+64-20190820-031613

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-9.2.0 *

Available Python interpreters, in order of preference:
  [1]   python3.6
  [2]   python2.7 (fallback)
  [3]   pypy (fallback)
Available Ruby profiles:
  [1]   ruby24 (with Rubygems)
  [2]   ruby25 (with Rubygems) *

java-config:
The following VMs are available for generation-2:
*)	IcedTea JDK 3.13.0 [icedtea-bin-8]
Available Java Virtual Machines:
  [1]   icedtea-bin-8  system-vm

emerge -qpvO sci-libs/pastix
[ebuild  N    ] sci-libs/pastix-5.2.3  USE="mpi smp -doc -int64 -starpu -static-libs"
Comment 1 Toralf Förster gentoo-dev 2019-08-22 20:34:13 UTC
Created attachment 587798 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2019-08-22 20:34:16 UTC
Created attachment 587800 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2019-08-22 20:34:19 UTC
Created attachment 587802 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2019-08-22 20:34:21 UTC
Created attachment 587804 [details]
etc.portage.tbz2
Comment 5 Toralf Förster gentoo-dev 2019-08-22 20:34:24 UTC
Created attachment 587806 [details]
sci-libs:pastix-5.2.3:20190822-202036.log
Comment 6 David Seifert gentoo-dev 2022-01-28 22:31:32 UTC
*** Bug 774033 has been marked as a duplicate of this bug. ***
Comment 7 Larry the Git Cow gentoo-dev 2022-01-29 00:00:32 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=017a3b4500248d207227590d7728f66f4195db9a

commit 017a3b4500248d207227590d7728f66f4195db9a
Author:     David Seifert <soap@gentoo.org>
AuthorDate: 2022-01-29 00:00:15 +0000
Commit:     David Seifert <soap@gentoo.org>
CommitDate: 2022-01-29 00:00:15 +0000

    sci-libs/pastix: fix building against OpenMPI 4.1+
    
    Closes: https://bugs.gentoo.org/692742
    Signed-off-by: David Seifert <soap@gentoo.org>

 sci-libs/pastix/files/pastix-5.2.3-MPI-3.0.patch | 139 +++++++++++++++++++++++
 sci-libs/pastix/pastix-5.2.3.ebuild              |   5 +-
 2 files changed, 142 insertions(+), 2 deletions(-)