Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 689054 - sci-visualization/paraview-5.6.1[openmp]: ... error: ‘numVals’ is predetermined ‘shared’ for ‘shared’
Summary: sci-visualization/paraview-5.6.1[openmp]: ... error: ‘numVals’ is predetermin...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal with 1 vote (vote)
Assignee: Matthias Maier
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2019-07-01 00:41 UTC by Jouni Kosonen
Modified: 2019-08-05 00:08 UTC (History)
10 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,481.82 KB, text/x-log)
2019-07-01 00:41 UTC, Jouni Kosonen
Details

Note You need to log in before you can comment on or make changes to this bug.
Description Jouni Kosonen 2019-07-01 00:41:36 UTC
Created attachment 581580 [details]
build.log

With USE=-openmp it builds successfully.
It's almost as if files/paraview-5.6.1-fix_openmp_4.0.patch didn't work as intended, at least with gcc-8.3.0.


# emerge --info sci-visualization/paraview sys-cluster/openmpi
Portage 2.3.66 (python 3.6.8-final-0, default/linux/amd64/17.1/desktop/plasma, gcc-8.3.0, glibc-2.29-r2, 4.19.55-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.19.55-gentoo-x86_64-AMD_Phenom-tm-_II_X4_945_Processor-with-gentoo-2.6
KiB Mem:    16421900 total,   1932092 free
KiB Swap:    8388604 total,   8388604 free
Timestamp of repository gentoo: Mon, 01 Jul 2019 00:04:36 +0000
Head commit of repository gentoo: 8d79bc8bf3c4923ad8e103b08d19659c71b9198d

sh bash 4.4_p23-r1
ld GNU ld (Gentoo 2.32 p2) 2.32.0
ccache version 3.6 [disabled]
app-shells/bash:          4.4_p23-r1::gentoo
dev-java/java-config:     2.2.0-r4::gentoo
dev-lang/perl:            5.28.2-r1::gentoo
dev-lang/python:          2.7.16::gentoo, 3.6.8::gentoo
dev-util/ccache:          3.6::gentoo
dev-util/cmake:           3.14.3::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.6-r1::gentoo
sys-apps/openrc:          0.41.2::gentoo
sys-apps/sandbox:         2.13::gentoo
sys-devel/autoconf:       2.13-r1::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.11.6-r3::gentoo, 1.13.4-r2::gentoo, 1.16.1-r1::gentoo
sys-devel/binutils:       2.32-r1::gentoo
sys-devel/gcc:            7.3.0-r6::gentoo, 8.2.0-r6::gentoo, 8.3.0-r1::gentoo
sys-devel/gcc-config:     2.0::gentoo
sys-devel/libtool:        2.4.6-r5::gentoo
sys-devel/make:           4.2.1-r4::gentoo
sys-kernel/linux-headers: 4.14-r1::gentoo (virtual/os-headers)
sys-libs/glibc:           2.29-r2::gentoo
Repositories:

gentoo
    location: /usr/git_portage
    sync-type: git
    sync-umask: 0002
    sync-uri: https://github.com/gentoo-mirror/gentoo.git
    sync-user: portage:portage
    priority: -1000

local-repo
    location: /usr/local/portage
    masters: gentoo
    priority: 3

crossdev
    location: /usr/cross-compilers
    masters: local-repo gentoo
    priority: 10

Installed sets: @arch, @binary, @browsers, @cad, @cluster, @crosswin, @crypt, @dns, @docker, @dvd, @editors, @emul, @extradb, @fonts, @fs, @gfx, @gst10plugins, @im, @jupyter, @kde5, @lang, @math, @mtp, @net_analyze, @offworld, @prog, @qt5, @rdp, @sound, @sysdev, @tex, @video, @visual, @voip, @wwwapps, @xml, @zeromq
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA Oracle-BCLA-JavaSE skype-eula skype-4.0.0.7-copyright google-chrome Google-TOS AdobeFlash-11.x PUEL cadsoft FraunhoferFDK TeamViewer RAR"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=amdfam10 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/sddm/scripts/Xsetup /var/bind"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php7.2/ext-active/ /etc/php/apache2-php7.3/ext-active/ /etc/php/cgi-php7.2/ext-active/ /etc/php/cgi-php7.3/ext-active/ /etc/php/cli-php7.2/ext-active/ /etc/php/cli-php7.3/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=amdfam10 -O2 -pipe"
DISTDIR="/work/distfiles"
EMERGE_DEFAULT_OPTS="--quiet-build=y --with-bdeps=y"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://mirror.mdfnet.se/gentoo http://ftp.halifax.rwth-aachen.de/gentoo/ http://gentoo.mirrors.hoobly.com/ "
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LINGUAS="en en_US fi fi_FI"
MAKEOPTS="-j3 -l8.8"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi activities aio alsa amd64 amr berkdb bluetooth branding bzip2 cairo caps cdda cdf cdr cleartype cli corefonts crypt cups curl cxx dbus declarative designer dot dri dts dvd dvdr eigen elogind emacs emboss encode exif fam flac fontforge fortran gcj gdbm gif git gl2ps glamor glib gnutls gpm gsl gstreamer gtk harfbuzz hdf5 heif iconv icu ipv6 java jemalloc jpeg jpeg2k kde kipi kpathsea kwallet ladspa lcms ldap libass libkms libnotify libtirpc lz4 lzma lzo mad matroska metric mng mp3 mp4 mpeg mtp multilib ncurses nls nptl nscd octave ogg ogm openexr opengl openmp opus pam pango pcre pdf phonon physfs plasma png policykit ppds pulseaudio python qml qt5 readline sdl sdl2 seccomp sndfile source spell sqlite3 ssl startup-notification svg tbb tcpd theora threads tiff tk truetype type1 udev udisks unicode upower usb v4l vorbis vpx wavpack webengine webm webp widgets win32codecs wmf wxwidgets x264 x265 xattr xcb xcomposite xinerama xml xrandr xv xvid zlib zstd" ABI_X86="64 32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="3dnow 3dnowext mmx mmxext popcnt sse sse2 sse3 sse4a" CURL_SSL="openssl" ELIBC="glibc" ENLIGHTENMENT_MODULES="backlight battery clock comp conf-applications conf-dialogs conf-display conf-edgebindings conf-interaction conf-intl conf-keybindings conf-menus conf-paths conf-performance conf-randr conf-shelves conf-theme conf-window-manipulation conf-window-remembers cpufreq dropshadow everything fileman fileman-opinfo gadman ibar ibox illume2 mixer msgbus notification pager quickaccess shot start syscon systray tasks temperature tiling winlist wizard xkbswitch" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev keyboard mouse" KERNEL="linux" L10N="en en-US fi fi-FI" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="nlpsolver pdfimport scripting-javascript" NETBEANS_MODULES="apisupport cnd groovy gsf harness ide identity j2ee java mobility nb php profiler soa visualweb webcommon websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2 php7-3" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_6" QEMU_USER_TARGETS="arm" RUBY_TARGETS="ruby25 ruby26" USERLAND="GNU" VIDEO_CARDS="radeon r600 vesa vga" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

=================================================================
                        Package Settings
=================================================================

sci-visualization/paraview-5.6.1::gentoo was built with the following:
USE="qt5 tk -boost -cg -coprocessing -development -doc -examples -ffmpeg -mpi -mysql -nvcontrol -offscreen -openmp -plugins -python -sqlite -tcl -test" ABI_X86="(64)" PYTHON_SINGLE_TARGET="python3_6 -python2_7 -python3_5" PYTHON_TARGETS="python3_6 (-python2_7) -python3_5"
FEATURES="pid-sandbox multilib-strict preserve-libs userpriv news usersync ebuild-locks protect-owned binpkg-logs assume-digests sandbox binpkg-dostrip sfperms fixlafiles binpkg-docompress ipc-sandbox unknown-features-warn parallel-fetch merge-sync xattr unmerge-logs unmerge-orphans distlocks network-sandbox strict usersandbox userfetch config-protect-if-modified buildpkg"


sys-cluster/openmpi-4.0.1::gentoo was built with the following:
USE="cxx fortran ipv6 java -cma -cuda -heterogeneous -romio" ABI_X86="32 (64) (-x32)" OPENMPI_FABRICS="-knem -ofed -psm" OPENMPI_OFED_FEATURES="-control-hdr-padding -dynamic-sl -rdmacm -udcm" OPENMPI_RM="-pbs -slurm"
Comment 1 Jouni Kosonen 2019-07-01 20:52:31 UTC
Oh, also this:

...
> >>> Configuring source in /var/tmp/portage/sci-visualization/paraview-5.6.1/work/ParaView-v5.6.1 ...
> /var/tmp/portage/sci-visualization/paraview-5.6.1/temp/environment: line 3853: qt5_get_bindir: command not found
> /var/tmp/portage/sci-visualization/paraview-5.6.1/temp/environment: line 3853: qt5_get_bindir: command not found
> /var/tmp/portage/sci-visualization/paraview-5.6.1/temp/environment: line 3853: qt5_get_bindir: command not found
> >>> Working in BUILD_DIR: "/var/tmp/portage/sci-visualization/paraview-5.6.1/work/paraview-5.6.1_build"
> cmake -C ...  -DQT_MOC_EXECUTABLE=/moc -DQT_UIC_EXECUTABLE=/uic -DQT_QMAKE_EXECUTABLE=/qmake ...

qt5_get_bindir is defined in qmake-utils.eclass but the ebuild doesn't inherit that.
Comment 2 Thomas Beutin 2019-07-03 14:13:47 UTC
i run into the same issue, ...

> With USE=-openmp it builds successfully.

... and this fixed it here, too.

emerge --info sci-visualization/paraview                                                                                                                               [69/1861]
Portage 2.3.66 (python 3.6.5-final-0, default/linux/amd64/17.0/desktop, gcc-8.3.0, glibc-2.29-r2, 5.1.15-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-5.1.15-gentoo-x86_64-Intel_Xeon_E312xx_-Sandy_Bridge-with-gentoo-2.6
KiB Mem:    49354276 total,  43127920 free
KiB Swap:   33554428 total,  33554428 free
Timestamp of repository gentoo: Wed, 03 Jul 2019 00:15:01 +0000
Head commit of repository gentoo: 6161e3ea01caecf1f49bdfd29702b8ac0d9a5dd7
sh bash 4.4_p23-r1
ld GNU ld (Gentoo 2.31.1 p7) 2.31.1
app-shells/bash:          4.4_p23-r1::gentoo
dev-java/java-config:     2.2.0-r4::gentoo
dev-lang/perl:            5.28.2-r1::gentoo
dev-lang/python:          2.7.15::gentoo, 3.6.5::gentoo
dev-util/cmake:           3.14.3::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.6-r1::gentoo
sys-apps/openrc:          0.41.2::gentoo
sys-apps/sandbox:         2.13::gentoo
sys-devel/autoconf:       2.13-r1::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.11.6-r3::gentoo, 1.13.4-r2::gentoo, 1.15.1-r2::gentoo, 1.16.1-r1::gentoo
sys-devel/binutils:       2.31.1-r6::gentoo, 2.32-r1::gentoo
sys-devel/gcc:            8.3.0-r1::gentoo
sys-devel/gcc-config:     2.0::gentoo
sys-devel/libtool:        2.4.6-r3::gentoo
sys-devel/make:           4.2.1-r4::gentoo
sys-kernel/linux-headers: 5.0-r1::gentoo (virtual/os-headers)
sys-libs/glibc:           2.29-r2::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://192.168.45.107/gentoo-portage
    priority: -1000
    sync-rsync-verify-max-age: 24
    sync-rsync-verify-jobs: 1
    sync-rsync-verify-metamanifest: yes
    sync-rsync-extra-opts: 

x-portage
    location: /usr/local/portage
    masters: gentoo
    priority: 0

barzog-overlay
    location: /var/lib/layman/barzog-overlay
    masters: gentoo
    priority: 50

java
    location: /var/lib/layman/java
    masters: gentoo
    priority: 50

python
    location: /var/lib/layman/python
    masters: gentoo
    priority: 50

rion
    location: /var/lib/layman/rion
    masters: gentoo
    priority: 50

science
    location: /var/lib/layman/science
    masters: gentoo
    priority: 50

seden
    location: /var/lib/layman/seden
    masters: gentoo
    priority: 50

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=sandybridge -fomit-frame-pointer -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/fax /usr/share/gnupg/qualified.txt /var/spool/fax/etc /var/spool/munin-async/.ssh"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/apache2-php7.2/ext-active/ /etc/php/apache2-php7.3/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cgi-php7.2/ext-active/ /etc/php/cgi-php7.3/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/php/cli-php7.2/ext-active/ /etc/php/cli-php7.3/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /var/spool/fax/etc/xferfaxlog"
CXXFLAGS="-march=sandybridge -fomit-frame-pointer -O2 -pipe"
DISTDIR="/mnt/gentoo/distfiles/"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
INSTALL_MASK="/usr/lib/systemd/"
LANG="en_IE.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LINGUAS="en_GB en en_US de_DE de"
MAKEOPTS="-j128"
PKGDIR="/mnt/gentoo/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/mnt/gentoo/tmp"
USE="R X X509 a52 aac aalib accounting acl acpi adns aim aio alsa amd64 amr ansi ao aot apache2 apng applet archive ass audio audiofile automount avahi avx awt bacula-console bash-completion bazaar bcmath berkdb bidi bind-mysql bittorrent blas bluetooth bluray bonobo boost bzip2 cacert cairo caja calendar caps ccache cdb cdda cddb cdio cdparanoia cdr cgi chipcard chroot clang colord command-args corefonts cpudetection cpulimit cracklib cramfs crypt cscope css csv ctype cups curl curlwrappers customlog cvs cvsgraph cxx cyrus dba dbi dbm dbus dbx devhelp device-mapper devmap dga dhcp dirac directfb djvu dlna dlopen dnsdb dri dri3 drm dts dv dvb dvd dvdr dvi ecc egl elogind enchant encode excel exif expat faad fam fastcgi fat fdk ffmpeg fftw fits flac flash flatfile fltk fontconfig fonts fpx ftp fuse fusefs gallium gd gdal gdbm gdu geoclue geoip geos ggi gif gimp ginac git glib glpk glut gmp gnome-keyring gnuplot gpg gphoto2 graphviz gs gsf gsl gsm gssapi gstreamer gtk gtk2 gtk3 gudev gzip h323 hardened hardenedphp hddtemp hdf5 hdri highlight hpn html http hunspell hwdb iconv icq icu idea idled idn imagemagick imap imlib imlib2 inifile innodb int64 introspection ios ipalias ipc ipod ipv6 iso jabber jack java javascript jbig jingle jit jpeg jpeg2k json kdrive kerberos keymap kmod kpathsea lame lapack latex lcms ldap less libass libcaca libcerf libcxx libnotify libsamplerate libv4l libv4l2 libwww live llvm lm_sensors lmtp logrotate logwatch lua lz4 lzma lzo mad magic mathml matplotlib matroska mbox mcal md5sum memlimit mercurial metis mgetty mhash midi milter mime mimencode ming mmap mms mmx mmxext mng mp3 mp4 mpeg mpir mplayer msn mtp multilib mumps musepack musicbrainz mysql mysqli nagios-dns nagios-game nagios-ntp nagios-ping nagios-ssh natspec ncurses net netboot netcdf netlink network network-uri networkmanager nfs nis nls nntp nptl nsplugin nss ntfs ntp oav ocaml ocamlopt ocatve ocr octave odbc offensive ogg openal openexr opengl openh264 openrc openssh openssl opus orc ortp osc oscar pam pam_chroot pam_console pam_timestamp pango parse-clocks pcf pci pcntl pcre pda pdf pdfkit pdflib perl pgo php pic plotutils png policykit portaudio posix postfix postgis postgres postproc postscript ppds procmail ps pulseaudio pwdb python qdbm qt5 quotas quvi radius raw rdesktop rdp readline recode reiserfs rpc rrdtool rss rtmp ruby samba sample sasl scanner schroedinger scotch screen sendfile sensord session sftp sftplogging shaper shared sharedext shorten shout sieve simplexml slang slp smartcard smime smp sms smtp sna sndfile snmp snortsam soap sockets socks5 sound sox spamassassin sparse spatialite speex spell spice spl split-usr sql sqlite sqlite3 sse sse2 sse3 sse4 sse4_1 ssh ssl ssse3 stream subversion svg sysfs syslog sysvipc szip t1lib taglib tcpd telepathy test-programs theora threads tidy tiff timidity tokenizer tools transparent-proxy truetype truetype-fonts tslib twolame type1-fonts udev udisks unicode upnp upnp-av upower usb userlocales utf8 uuid v4l vaapi vala vcd vdpau vhosts video vim-syntax virtual-users virus-scan vnc vorbis vpx vte wayland wddx weather webdav webkit webm webp wifi win32codecs withsamplescripts wmf x264 x265 xattr xcb xcomposite xetex xface xfs xft xinerama xinetd xml xml2 xmlrpc xmp xmpp xorg xosd xpdf-headers xpm xps xrandr xscreensaver xsl xslt xv xvfb xvid xvmc xz yahoo yaml yaz zeromq zlib zvbi" ABI_X86="32 64" APACHE2_MODULES="access auth auth_basic auth_digest authn_default authn_core authn_file authn_dbm authn_dbd authn_alias authn_anon authz_core authz_groupfile authz_host authz_user authz_dbd authz_dbm authz_owner authz_default dbd ident imagemap alias echo charset_lite cache file_cache disk_cache mem_cache ext_filter case_filter case-filter-in deflate filter mime_magic cern_meta proxy proxy_connect proxy_ftp http2 proxy_html proxy_http proxy_ajp proxy_balancer proxy_fcgi proxy_wstunnel expires headers usertrack info include cgi cgid dav dav_lock dav_fs vhost_alias speling rewrite log_config logio env setenvif mime status substitute autoindex asis negotiation dir imap actions userdir so unique_id version dumpio log_forensic reqtimeout socache_shmcb unixd slotmem_shm ratelimit remoteip lbmethod_bybusyness lbmethod_byrequests lbmethod_bytraffic lbmethod_heartbeat xml2enc brotli watchdog" APACHE2_MPMS="worker" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" CURL_SSL="openssl" ELIBC="glibc" FFTOOLS="cws2fws ffhash pktdumper sidxindex qt-faststart aviocat ismindex" GPSD_PROTOCOLS="aivdm sirf mtk3301 gpsclock superstar2 timing nmea" GRUB_PLATFORMS="pc multiboot efi coreboot efi-64" INPUT_DEVICES="keyboard mouse evdev wacom synaptics" KERNEL="linux" L10N="en_GB en en_US de_DE de" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer nlpsolver pdfimport wiki-publisher" LLVM_TARGETS="X86 NVPTX" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6 php7-2 php7-3" POSTGRES_TARGETS="postgres11 postgres12" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_6" QEMU_SOFTMMU_TARGETS="i386 x86_64" QEMU_USER_TARGETS="i386 x86_64" RUBY_TARGETS="ruby24" SANE_BACKENDS="net hp" USERLAND="GNU" VIDEO_CARDS="vga intel i915 i965 fbdev vesa" XFCE_PLUGINS="clock multiload-nandhp power trash"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, LC_ALL, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

=================================================================
                        Package Settings
=================================================================

sci-visualization/paraview-5.6.1::gentoo was built with the following:
USE="boost ffmpeg mysql plugins qt5 sqlite -cg -coprocessing -development -doc -examples -mpi -nvcontrol -offscreen -openmp -python -tcl -test -tk" ABI_X86="(64)" PYTHON_SINGLE_TARGET="python3_6 -python2_7 -python3_5" PYTHON_TARGETS="python2_7 python3_6 -python3_5"
FEATURES="sfperms usersync strict network-sandbox multilib-strict unmerge-orphans binpkg-docompress userpriv buildpkg protect-owned sandbox fixlafiles parallel-fetch preserve-libs binpkg-logs userfetch news usersandbox ebuild-locks xattr binpkg-dostrip merge-sync unmerge-logs config-protect-if-modified unknown-features-warn distlocks ipc-sandbox pid-sandbox assume-digests"
Comment 3 hangglider 2019-07-04 11:00:23 UTC
same here.
Comment 4 silver_ghost 2019-07-17 14:48:24 UTC
Same error.
Comment 5 Matthias Maier gentoo-dev 2019-08-04 20:55:42 UTC
Yes, wel'll need a couple of patches for openmp-4 support.
Comment 6 Jouni Kosonen 2019-08-04 22:21:22 UTC
(In reply to Matthias Maier from comment #5)
> Yes, wel'll need a couple of patches for openmp-4 support.

The problem is not the current openmp-4 support patch existing, it's that it blindly assumes >=gcc-9. It's definitely not needed for gcc-8 and I frankly don't know if it's been tested to work with _any_ version of clang. I've just been applying the reverse of that patch locally to get things to work.
Comment 7 Matthias Maier gentoo-dev 2019-08-04 22:48:25 UTC
(In reply to Jouni Kosonen from comment #6)
> (In reply to Matthias Maier from comment #5)
> > Yes, wel'll need a couple of patches for openmp-4 support.
> 
> The problem is not the current openmp-4 support patch existing, it's that it
> blindly assumes >=gcc-9. It's definitely not needed for gcc-8 and I frankly
> don't know if it's been tested to work with _any_ version of clang. I've
> just been applying the reverse of that patch locally to get things to work.

You're absolutely right. I forgot that I already merged some OpenMP 4 patches for Paraview. I will apply the proper upstream patch (that takes care of compatibility).
Comment 8 Larry the Git Cow gentoo-dev 2019-08-05 00:08:10 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=73ae0aa9dc7cfada6451f57398faf2e0adf47d7b

commit 73ae0aa9dc7cfada6451f57398faf2e0adf47d7b
Author:     Matthias Maier <tamiko@gentoo.org>
AuthorDate: 2019-08-04 22:47:26 +0000
Commit:     Matthias Maier <tamiko@gentoo.org>
CommitDate: 2019-08-05 00:07:38 +0000

    sci-visualization/paraview: apply proper OpenMP 4 fix
    
    Let's apply the proper upstream fix for OpenMP 4. This fixes compilation
    issues with older gcc.
    
    Closes: https://bugs.gentoo.org/689054
    Package-Manager: Portage-2.3.70, Repoman-2.3.16
    Signed-off-by: Matthias Maier <tamiko@gentoo.org>

 .../files/paraview-5.6.1-fix_openmp_4.0.patch      | 77 ++++++++++++++++++----
 1 file changed, 63 insertions(+), 14 deletions(-)