I attempted to build sci-libs/libmed-4.0.0-r1 and it failed with a message in the configure phase indicating that libmed requires hdf5 1.10.2 or greater. The libmed ebuild specifies '>=sci-libs/hdf5-1.10.0' in its DEPEND/RDEPEND, and I had version 1.10.1 installed. After manually emerging =sci-libs/hdf5-1.10.5:0/1.10.5 the libmed build was successful. I think that RDEPEND should be updated to match the 1.10.2 requirement of the configure script. Obviously let me know if you need more information. Snippet of failed libmed build.log follows: =========================================================================== >>> Configuring source in /var/tmp/portage/sci-libs/libmed-4.0.0-r1/work/med-4.0.0 ... ... SNIP ... -- Detecting Fortran/C Interface -- Detecting Fortran/C Interface - Found GLOBAL and MODULE mangling -- Check for HDF5 ... -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libsz.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr /lib64/libm.so (found version "1.10.1") -- Found HDF5 version 1.10.1 -- parallel flag is set to -- _versionComponents=1;10;1 -- HDF5_VERSION=1.10.1 CMake Error at config/cmake_files/medMacros.cmake:402 (MESSAGE): HDF5 version is 1.10.1. Only versions >= 1.10.2 are supported. Call Stack (most recent call first): CMakeLists.txt:104 (MED_FIND_HDF5) -- Configuring incomplete, errors occurred! See also "/var/tmp/portage/sci-libs/libmed-4.0.0-r1/work/libmed-4.0.0_build/CMakeFiles/CMakeOutput.l og". * ERROR: sci-libs/libmed-4.0.0-r1::gentoo-portage failed (configure phase): * cmake failed
Thanks for pointing this out. Didn't notice this when updating the ebuild, because I used 1.10.5 already.
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1558b15854bbcb2e95802294775b4880911793e3 commit 1558b15854bbcb2e95802294775b4880911793e3 Author: Bernd Waibel <waebbl@gmail.com> AuthorDate: 2019-06-14 21:05:38 +0000 Commit: Andreas Sturmlechner <asturm@gentoo.org> CommitDate: 2019-06-15 20:55:08 +0000 sci-libs/libmed: fix hdf5 dependency version Needs at least hdf5-1.10.2 as noted in configure.ac. Reported-by: Brian G. <gissf1@yahoo.com> Closes: https://bugs.gentoo.org/688078 Package-Manager: Portage-2.3.67, Repoman-2.3.14 Signed-off-by: Bernd Waibel <waebbl@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/12255 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org> sci-libs/libmed/libmed-4.0.0-r1.ebuild | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-)
