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Bug 672162 - media-libs/opencv-3.4* build fails when /.git exists
Summary: media-libs/opencv-3.4* build fails when /.git exists
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Amy Liffey
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2018-11-28 12:58 UTC by Drunkard Zhang
Modified: 2019-01-14 22:23 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build log (build.log,29.17 KB, text/x-log)
2018-11-28 13:17 UTC, Drunkard Zhang
Details

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Description Drunkard Zhang 2018-11-28 12:58:47 UTC
Latest opencv fails to build when /.git exists, and it's not owned by user portage, cause sandbox wants to create new file /.git/index.lock, why would that happen.

Reproducible: Always

Steps to Reproduce:
1. mkdir /.git && chown root:root /.git
2. emerge -1avq =media-libs/opencv-3.4.1-r5
Actual Results:  
Last lines of failed build log:

 * --------------------------- ACCESS VIOLATION SUMMARY ---------------------------
 * LOG FILE: "/var/log/sandbox/sandbox-2896.log"
 * 
VERSION 1.0
FORMAT: F - Function called
FORMAT: S - Access Status
FORMAT: P - Path as passed to function
FORMAT: A - Absolute Path (not canonical)
FORMAT: R - Canonical Path
FORMAT: C - Command Line

F: open_wr
S: deny
P: /.git/index.lock
A: /.git/index.lock
R: /.git/index.lock
C: /usr/bin/git describe --tags --always --dirty --match [0-9].[0-9].[0-9]* 
 * --------------------------------------------------------------------------------
!!! When you file a bug report, please include the following information:
GENTOO_VM=  CLASSPATH="" JAVA_HOME="/etc/java-config-2/current-system-vm"
JAVACFLAGS="" COMPILER=""
and of course, the output of emerge --info =opencv-3.4.1


20:57:38 / # emerge --info =opencv-3.4.1
Portage 2.3.52 (python 3.6.6-final-0, default/linux/amd64/17.0/desktop/gnome/systemd, gcc-8.2.0, glibc-2.28-r2, 4.19.1-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.19.1-gentoo-x86_64-Intel-R-_Core-TM-_i7-6700HQ_CPU_@_2.60GHz-with-gentoo-2.6
KiB Mem:    24545468 total,  14123160 free
KiB Swap:    8388604 total,   8388604 free
Head commit of repository gentoo: a8d045f19b6bf76f46c7120d3a2462c068c5bb72

sh bash 4.4_p23
ld GNU ld (Gentoo 2.31.1 p3) 2.31.1
app-shells/bash:          4.4_p23::gentoo
dev-java/java-config:     2.2.0-r4::gentoo
dev-lang/perl:            5.26.2::gentoo
dev-lang/python:          2.7.15::gentoo, 3.5.5-r1::gentoo, 3.6.6::gentoo, 3.7.0::gentoo
dev-util/cmake:           3.13.0::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.6-r1::gentoo
sys-apps/openrc:          0.38.2::gentoo
sys-apps/sandbox:         2.13::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.9.6-r5::gentoo, 1.11.6-r3::gentoo, 1.16.1-r1::gentoo
sys-devel/binutils:       2.31.1-r1::gentoo
sys-devel/gcc:            7.3.0-r6::gentoo, 8.2.0-r4::gentoo
sys-devel/gcc-config:     2.0::gentoo
sys-devel/libtool:        2.4.6-r5::gentoo
sys-devel/make:           4.2.1-r4::gentoo
sys-kernel/linux-headers: 4.19::gentoo (virtual/os-headers)
sys-libs/glibc:           2.28-r2::gentoo
Repositories:

anyc
    location: /var/lib/layman/anyc
    masters: gentoo
    priority: 50

pentoo
    location: /var/lib/layman/pentoo
    masters: gentoo
    priority: 50

tlp
    location: /var/lib/layman/tlp
    masters: gentoo
    priority: 60

drunkard
    location: /var/lib/layman/drunkard
    masters: gentoo
    priority: 80

gentoo
    location: /usr/portage
    sync-type: git
    sync-uri: git://anongit.gentoo.org/repo/gentoo.git
    priority: 9999

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -march=haswell -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/gnupg/qualified.txt /var/bind"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -march=haswell -pipe"
DISTDIR="/usr/portage/distfiles"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs config-protect-if-modified distlocks downgrade-backup ebuild-locks fixlafiles merge-sync multilib-strict news nodoc noinfo parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://mirrors.163.com/gentoo/ http://mirrors.sohu.com/gentoo/ http://mirrors.aliyun.com/gentoo/ http://mirrors.kernel.org/gentoo/ "
LANG="en_US.utf8"
LC_ALL="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LINGUAS="zh zh-CN zh-HK zh-TW zh_CN zh_HK zh_TW en ru de bo ug"
MAKEOPTS="-j9"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac aalib accessibility acl acpi aio alsa amd64 amr amrenc ao ap apm audit bash-completion berkdb bluetooth bluray branding broadway bzip2 cairo caps cdda cjk cleartype cli colord cracklib crypt cups cxx dbus dga djvu dri dri3 drm dts dvd dvdr eds egl emboss encode epoll evo exif fam ffmpeg flac flite fontconfig fortran gallium gconf gdbm gegl geoip gif gimp glamor gles gles2 gnome gnome-keyring gnome-online-accounts gpm gstreamer gtk gtk3 hidpi http2 iconv icu idn imagemagick inotify introspection ipv6 jack jit jpeg jpeg2k kdbus kms lcms libass libbluray libinput libnotify libsecret libtirpc linguas_bo linguas_de linguas_en linguas_ru linguas_ug linguas_zh linguas_zh_CN linguas_zh_HK linguas_zh_TW lz4 lzma lzo mad mime minizip mmap mng mp3 mp4 mpeg mpi mtp multilib natspec nautilus ncurses networkmanager nls nptl ogg openal opencc opencl openexr opengl openmp opus pam pango pcre pdf png policykit postgres postscript ppds pulseaudio raw readline realtime sdl seccomp sftp smp ssh ssl startup-notification svg systemd theora threads tiff tracker truetype udev udisks unicode upower usb usbredir v4l v4l2 vaapi vdpau vim-syntax vorbis vpx vulkan wayland webp wifi wxwidgets x264 x265 xattr xcb xinerama xkb xml xmp xpm xrandr xv xvid xvmc zlib" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon plan sheets stage words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 f16c fma3 mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" CURL_SSL="openssl" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64 pc" INPUT_DEVICES="evdev keyboard libinput mouse" KERNEL="linux" L10N="zh zh-CN zh-HK zh-TW zh_CN zh_HK zh_TW en ru de bo ug" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6 php7-1" POSTGRES_TARGETS="postgres9_5 postgres10" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_6 python3_7" QEMU_SOFTMMU_TARGETS="i386 x86_64" QEMU_USER_TARGETS="i386 x86_64" RUBY_TARGETS="ruby23 ruby25" SANE_BACKENDS="hp hp3500" USERLAND="GNU" VIDEO_CARDS="nouveau intel i965 v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Drunkard Zhang 2018-11-28 13:17:02 UTC
Created attachment 556568 [details]
build log

Full build log, all looks normal except sandbox log.
Comment 2 Larry the Git Cow gentoo-dev 2019-01-14 22:23:33 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9e7938189272bae00cd3da81d868cfe85748d08d

commit 9e7938189272bae00cd3da81d868cfe85748d08d
Author:     Amy Liffey <amynka@gentoo.org>
AuthorDate: 2019-01-14 22:15:53 +0000
Commit:     Amy Liffey <amynka@gentoo.org>
CommitDate: 2019-01-14 22:20:23 +0000

    media-libs/opencv: patch to remove git autodetect
    
    Closes: https://bugs.gentoo.org/672162
    Signed-off-by: Amy Liffey <amynka@gentoo.org>
    Package-Manager: Portage-2.3.49, Repoman-2.3.11

 .../files/opencv-3.4.1-remove-git-autodetect.patch | 42 ++++++++++++++++++++++
 media-libs/opencv/opencv-3.4.1-r5.ebuild           |  3 +-
 2 files changed, 44 insertions(+), 1 deletion(-)