app-admin/metalog-3-r2 merge fails during stage3 of prefix build because of undefined references in libpthread.so.0 The error is: x86_64-pc-linux-gnu-gcc -std=gnu99 -std=gnu99 -Wall -W -Wcast-qual -Wcast-align -Wmissing-noreturn -Wbad-function-cast -Wstrict-prototypes -Wwrite-strings -Wreturn-type -O2 -pipe -O2 -pipe -Wl,-O1 -Wl,--as-needed -o metalog metalog.o ../gnulib/lib/libgnu.a -lpcre /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `__getrlimit@GLIBC_PRIVATE' /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `__twalk@GLIBC_PRIVATE' /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `__tsearch@GLIBC_PRIVATE' /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `__h_errno@GLIBC_PRIVATE' /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `memcpy@GLIBC_2.14' /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `__mktemp@GLIBC_PRIVATE' /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `__ctype_init@GLIBC_PRIVATE' /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `__tfind@GLIBC_PRIVATE' /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `__madvise@GLIBC_PRIVATE' /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `__libc_vfork@GLIBC_PRIVATE' /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `__call_tls_dtors@GLIBC_PRIVATE' /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `__clock_gettime@GLIBC_PRIVATE' /tmp/gentoo_playground/usr/bin/ld: /tmp/gentoo_playground/lib64/libpthread.so.0: undefined reference to `__tdelete@GLIBC_PRIVATE' collect2: error: ld returned 1 exit status I managed to solve this by building metalog with LDFLAGS="$LDFLAGS -lpthread". I attach a patch Reproducible: Always
Created attachment 554627 [details, diff] Possible patch to fix the problem
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e89960b35cf778df12786199f79b7634746de3ec commit e89960b35cf778df12786199f79b7634746de3ec Author: Patrick McLean <chutzpah@gentoo.org> AuthorDate: 2018-11-15 22:50:32 +0000 Commit: Patrick McLean <chutzpah@gentoo.org> CommitDate: 2018-11-15 22:52:08 +0000 app-admin/metalog: Version bump to 20181125 (bug #664344) Update HOMEPAGE to GitHub site Closes: https://bugs.gentoo.org/664344 Closes: https://bugs.gentoo.org/669694 Bug: https://bugs.gentoo.org/210711 Bug: https://bugs.gentoo.org/670757 Package-Manager: Portage-2.3.51, Repoman-2.3.12 Signed-off-by: Patrick McLean <chutzpah@gentoo.org> app-admin/metalog/Manifest | 1 + app-admin/metalog/files/metalog.initd-r1 | 28 ++++++++++++++ app-admin/metalog/metalog-20181125.ebuild | 64 +++++++++++++++++++++++++++++++ 3 files changed, 93 insertions(+)
This new version of metalog breaks in a different way: ./configure: line 6849: syntax error near unexpected token `-Wall,WFLAGS="$WFLAGS -Wall"' ./configure: line 6849: `AX_CHECK_COMPILE_FLAG(-Wall,WFLAGS="$WFLAGS -Wall")'
I'd like to know why metalog is pulled in in the first place, a Prefix shouldn't have a logger daemon. Do you happen to have a list of packages or dependency trail?
(In reply to Fabian Groffen from comment #4) > I'd like to know why metalog is pulled in in the first place, a Prefix > shouldn't have a logger daemon. Do you happen to have a list of packages or > dependency trail? It is pulled in by gnupg, which is pulled in by portage[rsync-verify]
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=daf1b659945e2a459fded63799084068bbdfd531 commit daf1b659945e2a459fded63799084068bbdfd531 Author: Benda Xu <heroxbd@gentoo.org> AuthorDate: 2018-12-20 16:02:38 +0000 Commit: Benda Xu <heroxbd@gentoo.org> CommitDate: 2018-12-20 16:15:07 +0000 profiles/features/prefix/package.use: disable rsync-verify by default. Closes: https://bugs.gentoo.org/670757 Signed-off-by: Benda Xu <heroxbd@gentoo.org> profiles/features/prefix/package.use | 2 ++ 1 file changed, 2 insertions(+) Additionally, it has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=86c5479fa7b12f81f11fc38033bfc9859eabf0ff commit 86c5479fa7b12f81f11fc38033bfc9859eabf0ff Author: YiFei Zhu <zhuyifei1999@gmail.com> AuthorDate: 2018-11-25 00:40:56 +0000 Commit: Benda Xu <heroxbd@gentoo.org> CommitDate: 2018-12-20 16:15:07 +0000 app-admin/metalog: DEPEND on sys-devel/autoconf-archive Its autoconf requires AX_CHECK_COMPILE_FLAG macro from sys-devel/autoconf-archive, or otherwise configure will fail with syntax error from unexpanded macro invocation. Closes: https://bugs.gentoo.org/671464 Closes: https://github.com/gentoo/gentoo/pull/10473 Bug: https://bugs.gentoo.org/670757 Package-Manager: Portage-2.3.52, Repoman-2.3.12 Signed-off-by: YiFei Zhu <zhuyifei1999@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org> app-admin/metalog/metalog-20181125.ebuild | 1 + 1 file changed, 1 insertion(+)
