checking whether to use PNG... yes checking for location of PNG includes... checking for png.h... yes checking for location of PNG library... checking for png_read_image in -lpng... yes checking whether to use PostgreSQL... no checking whether to use MySQL... yes checking for location of MySQL includes... /usr/include/mysql checking for mysql.h... yes checking for location of MySQL library... /usr/lib64/mysql configure: error: *** MySQL library directory /usr/lib64/mysql does not exist. !!! Please attach the following file when seeking support: !!! /scratch/var/tmp/portage/sci-geosciences/grass-7.4.0/work/grass-7.4.0/config.log * ERROR: sci-geosciences/grass-7.4.0::gentoo failed (configure phase): * econf failed * * Call stack: * ebuild.sh, line 124: Called src_configure * environment, line 4480: Called econf '--enable-shared' '--disable-w11' '--with-cxx' '--with-tiff' '--with-png' '--without-postgres' '--with-mysql' '--with-mysql-includes=/usr/include/mysql' '--with-mysql-libs=/usr/lib64/mysql' '--with-sqlite' '--with-opengl' '--without-odbc' '--without-fftw' '--without-blas' '--with-lapack' '--with-cairo' '--with-freetype' '--with-freetype-includes=/usr/include/freetype2' '--with-nls' '--with-readline' '--without-opendwg' '--with-regex' '--with-pthread' '--with-openmp' '--without-opencl' '--with-gdal=/usr/bin/gdal-config' '--without-liblas' '--with-wxwidgets=/usr/lib64/wx/config/gtk2-unicode-3.0' '--without-netcdf' '--without-geos' '--with-proj-includes=/usr/include/libprojectM' '--with-proj-libs=/usr/lib64' '--with-proj-share=/usr/share/proj/' '--with-x' * phase-helpers.sh, line 718: Called __helpers_die 'econf failed' * isolated-functions.sh, line 121: Called die * The specific snippet of code: * die "$@" * * If you need support, post the output of `emerge --info '=sci-geosciences/grass-7.4.0::gentoo'`, * the complete build log and the output of `emerge -pqv '=sci-geosciences/grass-7.4.0::gentoo'`. * The complete build log is located at '/scratch/var/tmp/portage/sci-geosciences/grass-7.4.0/temp/build.log'. * The ebuild environment file is located at '/scratch/var/tmp/portage/sci-geosciences/grass-7.4.0/temp/environment'. * Working directory: '/scratch/var/tmp/portage/sci-geosciences/grass-7.4.0/work/grass-7.4.0' * S: '/scratch/var/tmp/portage/sci-geosciences/grass-7.4.0/work/grass-7.4.0' # emerge --info '=sci-geosciences/grass-7.4.0::gentoo' Portage 2.3.40 (python 2.7.14-final-0, default/linux/amd64/17.0, gcc-7.3.0, glibc-2.27-r4, 4.16.10-default-pciehp x86_64) ================================================================= System Settings ================================================================= System uname: Linux-4.16.10-default-pciehp-x86_64-Intel-R-_Core-TM-_i7-2640M_CPU_@_2.80GHz-with-gentoo-2.6 KiB Mem: 16366200 total, 7562032 free KiB Swap: 26853460 total, 26698836 free Timestamp of repository gentoo: Fri, 15 Jun 2018 11:30:01 +0000 Head commit of repository gentoo: bde6e5a74325da403dfc1043816704922d60b36d sh bash 4.4_p23 ld GNU ld (Gentoo 2.30 p3) 2.30.0 app-shells/bash: 4.4_p23::gentoo dev-java/java-config: 2.2.0-r4::gentoo dev-lang/perl: 5.26.9999::gentoo dev-lang/python: 2.7.14-r2::gentoo, 3.4.6-r1::gentoo, 3.5.5-r1::gentoo, 3.6.5-r1::gentoo dev-util/cmake: 3.11.3::gentoo dev-util/pkgconfig: 0.29.2::gentoo sys-apps/baselayout: 2.6::gentoo sys-apps/openrc: 0.36::gentoo sys-apps/sandbox: 2.13::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r4::gentoo sys-devel/automake: 1.11.6-r2::gentoo, 1.12.6-r1::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15.1-r1::gentoo, 1.16.1-r1::gentoo sys-devel/binutils: 2.30-r3::gentoo sys-devel/gcc: 4.3.6-r1::gentoo, 4.4.7::gentoo, 4.6.4::gentoo, 4.7.4::gentoo, 4.9.4::gentoo, 5.4.0-r3::gentoo, 6.3.0::gentoo, 7.3.0-r3::gentoo sys-devel/gcc-config: 1.9.1::gentoo sys-devel/libtool: 2.4.6-r5::gentoo sys-devel/make: 4.2.1-r3::gentoo sys-kernel/linux-headers: 4.16-r1::gentoo (virtual/os-headers) sys-libs/glibc: 2.27-r4::gentoo Repositories: gentoo location: /scratch/usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 sync-rsync-verify-jobs: 1 sync-rsync-verify-metamanifest: yes sync-rsync-extra-opts: sync-rsync-verify-max-age: 24 science location: /scratch/mmokrejs/proj/sci masters: gentoo priority: 0 layman location: /var/lib/layman masters: gentoo priority: 1 x-portage location: /usr/local/portage masters: gentoo priority: 2 haskell location: /var/lib/layman/haskell masters: gentoo priority: 50 vmware location: /var/lib/layman/vmware masters: gentoo priority: 50 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA dlj-1.1 sun-bcla-java-vm Oracle-BCLA-JavaSE IBM-J1.6 skype-eula Nero-EULA-US AdobeFlash-10.3 skype-4.0.0.7-copyright AdobeFlash-11.x OPERA-2014 RAR Intel-SDP" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe -mpclmul -mpopcnt -march=native -ftree-vectorize" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /etc/stunnel/stunnel.conf /usr/lib64/libreoffice/program/sofficerc /usr/share/easy-rsa /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.2/conf /usr/share/maven-bin-3.3/conf /var/bind /var/lib/hsqldb /var/spool/torque" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/apache2-php7.1/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cgi-php7.1/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/php/cli-php7.1/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-O2 -pipe -mpclmul -mpopcnt -march=native -ftree-vectorize" DISTDIR="/scratch/usr/portage/distfiles" ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news nostrip parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://gentoo.wheel.sk/ http://ftp.fi.muni.cz/pub/linux/gentoo/ http://gentoo.mirror.web4u.cz/ rsync://gentoo.mirror.dkm.cz/gentoo/ ftp://gentoo.mirror.web4u.cz/" LDFLAGS="-Wl,-O1 -Wl,--as-needed" LINGUAS="en_US en_GB en cs" MAKEOPTS="-j2" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/scratch/var/tmp" USE="R X acpi alsa amd64 amr apache apache2 asm avx berkdb bluetooth boost bzip2 cairo cgi cli coin consolekit cracklib crypt cryptlib cryptsetup cups cxx dbus device-mapper dhcp directfb dri drm dvd emboss encode fax fbcon ffmpeg flac fontconfig fortran fuse gbm gcrypt gd gdbm geoip geolocation gimp glpk gmp gnutls gpm gps gtk hal hpijs hwdb iconv id3tag imaging innodb inotify java javafx javascript jce jpeg jpg js jscript keymap ladspa lame lapack laptop lcms libnotify libtirpc lm_sensors mad matroska mmx modemmanager modules mp3 multicore multilib multimedia mysql ncurses networkmanager nfs nls nptl nptlonly nscd ntfs ntfsdecrypt ntfsprogs objc ocr ogg opengl openmp pam parport pcre pcre16 pdf pdfimport pdl perl php pkcs11 plplot png policykit polkit postproc postscript ppds ppp pppd pptx python qt3support qt4 qt5 readline rendering resolvconf samba scanner sctp seccomp server session sha512 slideshow sna sndfile sparsehash sqlite sse sse2 sse3 sse4_1 sse4_2 ssh ssh-agent ssl sslv2 sslv3 ssse3 startup-notification suexec svg syslog tcl tcpd threads tiff tk truetype twolame udev unicode upower usb v4l v4l2 vim-syntax vnc wavpack wifi x11 xattr xcb xml xorg xrandr xv xvid xvmc zlib" ABI_X86="64 32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="alias authz_host auth_basic auth_digest cgi cgid deflate dir env filter include info mem_cache mime mime_magic negotiation remoteip setenvif status userdir vhost_alias rewrite usertrack cache file_cache disk_cache charset_lite log_config log_forensic" CALLIGRA_FEATURES="karbon plan sheets stage words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="aivdm ashtech earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 navcom ntrip oceanserver oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 tnt tripmate tsip ublox fury geostar nmea0183 nmea2000 passthrough" GRUB_PLATFORMS="pc" INPUT_DEVICES="libinput keyboard mouse" KERNEL="linux" L10N="en-US en en-GB cs" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" POSTGRES_TARGETS="postgres9_5 postgres10" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_5 python3_6" RUBY_TARGETS="ruby20 ruby21 ruby23 ruby24 ruby25" USERLAND="GNU" VIDEO_CARDS="vesa vmware fbdev intel i915" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Created attachment 536978 [details] build.log
Created attachment 536980 [details] config.log
# emerge -pv mysql mariadb These are the packages that would be merged, in order: Calculating dependencies... done! [ebuild R ] dev-db/mariadb-10.3.7:0/18::gentoo USE="backup cracklib pam perl server xml -bindist (-client-libs) -debug -extraengine -galera -innodb-lz4 -innodb-lzo -innodb-snappy -jdbc -jemalloc -kerberos -latin1 -libressl -mroonga -numa -odbc -oqgraph -profiling -rocksdb (-selinux) -sphinx -sst-mariabackup -sst-rsync -sst-xtrabackup -static -static-libs -systemd -systemtap -tcmalloc {-test} -tokudb -yassl" ABI_X86="32 (64) (-x32)" 0 KiB [ebuild R ] virtual/mysql-5.6-r12:0/18::gentoo USE="server (-embedded) -static" 0 KiB Total: 2 packages (2 reinstalls), Size of downloads: 0 KiB
Disabling the mysql USE flag works for me, but this is not what i really want. IMHO the subject line should be changed to: sci-geosciences/grass-7.4.0[mysql] - configure: error: *** MySQL library directory /usr/lib64/mysql does not exist.
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=81531bb2c743a288b03122d58b9abd01c6b0e27f commit 81531bb2c743a288b03122d58b9abd01c6b0e27f Author: Andreas Sturmlechner <asturm@gentoo.org> AuthorDate: 2019-02-21 09:11:44 +0000 Commit: Andreas Sturmlechner <asturm@gentoo.org> CommitDate: 2019-02-21 10:29:09 +0000 sci-geosciences/grass: 7.4.4 version bump, fix USE mysql, EAPI-7 prep Add missing desktop.eclass Drop bogus gnome2.eclass Switch to xdg.utils Use eapi7-ver Fix trailing slashes Sort IUSE and DEPENDs Fix mysql lib path Closes: https://bugs.gentoo.org/658888 Closes: https://bugs.gentoo.org/666052 Package-Manager: Portage-2.3.62, Repoman-2.3.12 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org> sci-geosciences/grass/Manifest | 1 + sci-geosciences/grass/grass-7.4.4.ebuild | 278 +++++++++++++++++++++++++++++++ 2 files changed, 279 insertions(+)
