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Bug 658640 - ~sci-libs/gdal-2.2.3[ogdi]: /usr/include/ecs.h:9:10: fatal error: rpc/rpc.h: No such file or directory
Summary: ~sci-libs/gdal-2.2.3[ogdi]: /usr/include/ecs.h:9:10: fatal error: rpc/rpc.h: ...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Sci-geo Project
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2018-06-21 09:54 UTC by Thomas Beutin
Modified: 2018-07-16 15:20 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (gzipped) (build.log.gz,26.81 KB, application/gzip)
2018-06-21 09:56 UTC, Thomas Beutin
Details

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Description Thomas Beutin 2018-06-21 09:54:57 UTC
Seems to be a dupe of bug 632660, but i cannot reopen it.

I reinstalled =sci-libs/ogdi-3.2.0 before w/o success for gdal



GENTOO_VM=  CLASSPATH="" JAVA_HOME=""
JAVACFLAGS="" COMPILER=""
emerge --info '=sci-libs/gdal-2.2.3-r1::gentoo':
Portage 2.3.40 (python 3.6.5-final-0, default/linux/amd64/17.0, gcc-7.3.0, glibc-2.26-r7, 4.9.95-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.9.95-gentoo-x86_64-Intel-R-_Xeon-R-_Gold_6134_CPU_@_3.20GHz-with-gentoo-2.4.1
KiB Mem:   196820780 total, 184614108 free
KiB Swap:  268435452 total, 268435452 free
Timestamp of repository gentoo: Wed, 20 Jun 2018 09:00:01 +0000
Head commit of repository gentoo: a447990a612bc157f3efddeb248c11dbe4446ba0
sh bash 4.4_p12
ld GNU ld (Gentoo 2.29.1 p3) 2.29.1
app-shells/bash:          4.4_p12::gentoo
dev-lang/perl:            5.24.3-r1::gentoo
dev-lang/python:          2.7.14-r1::gentoo, 3.4.8::gentoo, 3.5.5::gentoo, 3.6.5::gentoo
dev-util/cmake:           3.9.6::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.4.1-r2::gentoo
sys-apps/openrc:          0.34.11::gentoo
sys-apps/sandbox:         2.13::gentoo
sys-devel/autoconf:       2.69-r4::gentoo
sys-devel/automake:       1.15.1-r2::gentoo
sys-devel/binutils:       2.29.1-r1::gentoo, 2.30-r2::gentoo
sys-devel/gcc:            7.3.0-r3::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r3::gentoo
sys-devel/make:           4.2.1::gentoo
sys-kernel/linux-headers: 4.13::gentoo (virtual/os-headers)
sys-libs/glibc:           2.26-r7::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-verify-jobs: 1
    sync-rsync-extra-opts: 
    sync-rsync-verify-metamanifest: no
    sync-rsync-verify-max-age: 24

x-portage
    location: /usr/local/portage
    masters: gentoo
    priority: 0

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=knl -fomit-frame-pointer -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=knl -fomit-frame-pointer -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_IE.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j38"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X509 aac aacplus aalib accounting acl adns aim amd64 ansi apache2 audit automount autotrace bacula-console bash-completion bcmath berkdb bidi bind-mysql bittorrent bzip2 cairo calendar caps ccache cdb cgi chipcard chroot cli command-args corefonts cpudetection cpulimit cracklib cramfs cron crypt cscope css csv ctype curl curlwrappers customlog cvsgraph cxx cyrus dba dbi dbm dbx device-mapper devmap dhcp djvu dlopen dnsdb dri ecc emf encode enscript exif expat fam fastcgi ffmpeg fftw fits flac flash flatfile fontconfig fortran fpm fpx ftp gd gdal gdbm geoip geos gif git gmp graphviz gs gzip hardened hardenedphp hdf5 hdri hpn http i18n iconv icq icu idea idled idn imagemagick imap imlib imlib2 inifile innodb ipalias ipv6 jabber jbig jpeg jpeg2k json lapack lcms ldap less libtirpc libwww lm_sensors lmtp logrotate logwatch lz4 lzma lzo mbox mcal memlimit mgetty mhash milter mime mimencode ming mmap modules mp3 mpeg mpm-prefork mppe-mppc multilib mysql mysqli nagios-dns nagios-game nagios-ntp nagios-ping nagios-ssh ncurses netboot netcdf netifrc network nfs nls nntp nptl nptlonly ntp numa oav odbc ogg oggvorbis openexr openmp openrc openssl pam pam_chroot pam_console pam_timestamp pango parse-clocks pcntl pcre pdf pdfkit pdflib perl php pic plotutils png posix postfix postgis postgres postscript procmail proj pwdb python qdbm qemu quotas radius raw readline recode reiserfs rmtp rpc rrdtool rss sample sasl screen seccomp sendfile sensord session sftp sftplogging shaper shared sharedext sieve simplexml slang slp smartcard smime smp sms smtp snmp snortsam soap sockets socks5 spamassassin spell spl sql sqlite sqlite3 ssl stream subversion svg sysfs syslog sysvipc szip tcpd theora threads tidy tiff tls tokenizer transparent-proxy truetype truetype-fonts type1-fonts udev unicode userlocales utf8 uuid vhosts vim-syntax virtual-users virus-scan vorbis vpx wddx webp withsamplescripts wmf x264 xattr xfs xinetd xls xml xml2 xmlrpc xpm xsl xslt xvid yahoo yaz zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="access auth auth_basic auth_digest authn_default authn_core authn_file authz_core authz_groupfile authz_host authz_user authn_dbm authn_dbd authz_dbd dbd ident imagemap authn_alias authn_anon authz_dbm authz_owner authz_default authz_user auth_digest authz_host alias file_cache echo charset_lite cache disk_cache mem_cache ext_filter case_filter case-filter-in deflate filter mime_magic cern_meta proxy_ajp proxy_balancer expires http2 headers usertrack proxy proxy_html xml2enc proxy_connect proxy_ftp proxy_http info include cgi cgid dav dav_lock dav_fs vhost_alias speling rewrite log_config logio env setenvif mime status substitute autoindex asis negotiation dir imap actions userdir so unique_id version dumpio log_forensic reqtimeout socache_shmcb unixd proxy_fcgi slotmem_shm ratelimit remoteip lbmethod_bybusyness lbmethod_byrequests lbmethod_bytraffic lbmethod_heartbeat proxy_wstunnel macro" APACHE2_MPMS="worker" CALLIGRA_FEATURES="karbon plan sheets stage words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 avx512f avx512dq avx512cd avx512bw avx512vl f16c fma3 mmx mmxext pclmul popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" CURL_SSL="openssl" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="pc" INPUT_DEVICES="libinput keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LLVM_TARGETS="X86" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2" POSTGRES_TARGETS="postgres10" PYTHON_SINGLE_TARGET="python3_4" PYTHON_TARGETS="python2_7 python3_4 python3_6" QEMU_SOFTMMU_TARGETS="i386 x86_64" QEMU_USER_TARGETS="i386 x86_64" RUBY_TARGETS="ruby23" USERLAND="GNU" VIDEO_CARDS="vga dummy fbdev mga" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Thomas Beutin 2018-06-21 09:56:34 UTC
Created attachment 536654 [details]
build.log (gzipped)
Comment 2 Attila Tóth 2018-07-04 09:09:14 UTC
Same here. It's been there for a while because of glibc changes.
Comment 3 Attila Tóth 2018-07-04 09:18:34 UTC
(In reply to Attila Tóth from comment #2)
> Same here. It's been there for a while because of glibc changes.

It's the problem of package sci-libs/ogdi missing a patch for the above mentioned file.
Comment 4 Thomas Beutin 2018-07-04 09:29:29 UTC
(In reply to Attila Tóth from comment #3)
> (In reply to Attila Tóth from comment #2)
> > Same here. It's been there for a while because of glibc changes.
> 
> It's the problem of package sci-libs/ogdi missing a patch for the above
> mentioned file.

Well, accourding to your comment 13 on bug 632265 it works - or am i missing something?
Comment 5 Attila Tóth 2018-07-04 09:42:32 UTC
(In reply to Thomas Beutin from comment #4)
> (In reply to Attila Tóth from comment #3)
> > (In reply to Attila Tóth from comment #2)
> > > Same here. It's been there for a while because of glibc changes.
> > 
> > It's the problem of package sci-libs/ogdi missing a patch for the above
> > mentioned file.
> 
> Well, accourding to your comment 13 on bug 632265 it works - or am i missing
> something?

My comment was referring to an overlay. Not fixed in the tree right now. I don't know how that bug got closed. I'll post and updated patch there.
Comment 6 Attila Tóth 2018-07-07 09:50:51 UTC
(In reply to Attila Tóth from comment #5)
> (In reply to Thomas Beutin from comment #4)
> > (In reply to Attila Tóth from comment #3)
> > > (In reply to Attila Tóth from comment #2)
> > > > Same here. It's been there for a while because of glibc changes.
> > > 
> > > It's the problem of package sci-libs/ogdi missing a patch for the above
> > > mentioned file.
> > 
> > Well, accourding to your comment 13 on bug 632265 it works - or am i missing
> > something?
> 
> My comment was referring to an overlay. Not fixed in the tree right now. I
> don't know how that bug got closed. I'll post and updated patch there.

See also this relevant bug I opened about libtirpc header locations:
https://bugs.gentoo.org/660590
Comment 7 Larry the Git Cow gentoo-dev 2018-07-16 15:20:33 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0319666d48dfe5a424e75a1f497dee7033785c68

commit 0319666d48dfe5a424e75a1f497dee7033785c68
Author:     Amy Liffey <amynka@gentoo.org>
AuthorDate: 2018-07-07 11:03:34 +0000
Commit:     Amy Liffey <amynka@gentoo.org>
CommitDate: 2018-07-16 16:17:25 +0000

    sci-libs/gdal: fix build with ogdi
    
    - Fix subslot to 3.3
    Closes: https://bugs.gentoo.org/658640
    Package-Manager: Portage-2.3.40, Repoman-2.3.9

 .../{gdal-2.3.0.ebuild => gdal-2.3.0-r1.ebuild}    | 183 ++++++++++++---------
 1 file changed, 103 insertions(+), 80 deletions(-)