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Bug 641184 - dev-libs/libtommath-1.0.1 - OSError: [Errno 2] No such file or directory: '*.pdf'
Summary: dev-libs/libtommath-1.0.1 - OSError: [Errno 2] No such file or directory: '*....
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal with 1 vote (vote)
Assignee: Patrick Lauer
URL:
Whiteboard:
Keywords: PullRequest
Depends on:
Blocks:
 
Reported: 2017-12-15 20:11 UTC by Juergen Rose
Modified: 2020-07-14 13:02 UTC (History)
10 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,402.24 KB, text/x-log)
2017-12-15 20:11 UTC, Juergen Rose
Details
docs patch (libtommath-1.0.1.ebuild.patch,268 bytes, patch)
2018-02-04 12:47 UTC, Alexandros Diamantidis
Details | Diff

Note You need to log in before you can comment on or make changes to this bug.
Description Juergen Rose 2017-12-15 20:11:48 UTC
Created attachment 510216 [details]
build.log

'MAKEOPTS=-j1 emerge -v1 libtommath' fails with:
...
install -m 644 libtommath.pc /var/tmp/portage/dev-libs/libtommath-1.0.1/image//usr/lib64/pkgconfig/
Traceback (most recent call last):
  File "/usr/lib/portage/python2.7/doins.py", line 583, in <module>
    sys.exit(main(sys.argv[1:]))
  File "/usr/lib/portage/python2.7/doins.py", line 574, in main
    os.path.dirname(source)):
  File "/usr/lib/portage/python2.7/doins.py", line 422, in _doins
    return install_runner.install_file(source, os.path.dirname(dest))
  File "/usr/lib/portage/python2.7/doins.py", line 358, in install_file
    return self._ins_runner.run(source, dest_dir)
  File "/usr/lib/portage/python2.7/doins.py", line 171, in run
    if not self._is_install_allowed(source, dest):
  File "/usr/lib/portage/python2.7/doins.py", line 213, in _is_install_allowed
    source_stat = os.stat(source)
OSError: [Errno 2] No such file or directory: '*.pdf'
 * ERROR: dev-libs/libtommath-1.0.1::gentoo failed (install phase):
 *   dodoc failed




root@cheetahnew:/root(29)# emerge --info '=dev-libs/libtommath-1.0.1::gentoo'
Portage 2.3.18 (python 2.7.14-final-0, default/linux/amd64/13.0/desktop, gcc-7.2.0, glibc-2.26-r3, 4.13.4-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.13.4-gentoo-x86_64-Intel-R-_Core-TM-_i3-2120_CPU_@_3.30GHz-with-gentoo-2.4.1
KiB Mem:     7863000 total,   1365596 free
KiB Swap:   50331640 total,  49903340 free
Timestamp of repository gentoo: Fri, 15 Dec 2017 16:30:01 +0000
Head commit of repository gentoo: 44be1b30fedac15f597d0ca4aa6007fc908e9d23
sh bash 4.4_p12
ld GNU ld (Gentoo 2.29.1 p2) 2.29.1
distcc[12609] (dcc_trace_version) distcc 3.2rc1 x86_64-pc-linux-gnu; built Aug 28 2017 21:31:28 [disabled]
app-shells/bash:          4.4_p12::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.26.1-r1::gentoo
dev-lang/python:          2.7.14-r100::sage-on-gentoo, 3.4.6-r1::gentoo, 3.5.4-r1::gentoo, 3.6.3-r1::gentoo
dev-util/cmake:           3.10.1::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.4.1-r2::gentoo
sys-apps/openrc:          0.34.11::gentoo
sys-apps/sandbox:         2.12::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.9.6-r4::gentoo, 1.11.6-r2::gentoo, 1.15.1-r1::gentoo
sys-devel/binutils:       2.29.1-r1::gentoo
sys-devel/gcc:            6.4.0::gentoo, 7.2.0::gentoo
sys-devel/gcc-config:     1.9.0-r1::gentoo
sys-devel/libtool:        2.4.6-r4::gentoo
sys-devel/make:           4.2.1-r1::gentoo
sys-kernel/linux-headers: 4.13::gentoo (virtual/os-headers)
sys-libs/glibc:           2.26-r3::gentoo
Repositories:

gentoo
    location: /usr/portage_cheetahnew
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-extra-opts: 

x-portage
    location: /usr/local/portage
    masters: gentoo
    priority: 0

g-cpan
    location: /var/lib/cpan
    masters: gentoo
    priority: 1

g-octave
    location: /var/lib/g-octave
    masters: gentoo
    priority: 2

sage-on-gentoo
    location: /var/lib/layman/sage-on-gentoo
    masters: gentoo science
    priority: 50

science
    location: /var/lib/layman/science
    masters: gentoo
    priority: 50

x11
    location: /var/lib/layman/x11
    masters: gentoo
    priority: 50

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA PUEL Intel-SDP dlj-1.1 skype-eula skype-4.0.0.7-copyright googleearth AdobeFlash-11.x cadsoft Oracle-BCLA-JavaSE MakeMKV-EULA NVIDIA-CUDA Nero-AAC-EULA GIMPS"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /etc/stunnel/stunnel.conf /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/chromium/policies/managed/chrome-gnome-shell.json /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/opt/chrome/policies/managed/chrome-gnome-shell.json /etc/php/apache2-php7.1/ext-active/ /etc/php/apache2-php7.2/ext-active/ /etc/php/cgi-php7.1/ext-active/ /etc/php/cgi-php7.2/ext-active/ /etc/php/cli-php7.1/ext-active/ /etc/php/cli-php7.2/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs clean-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="64bit R X Xaw3d a52 aac acl acpi admin afs alsa amd64 amr ao apache2 apng applet archive armadillo arpack asf aspell assistant atlas audiofile aufs automap automount barcode bash-completion berkdb blas blast bluetooth bluray boost branding btrfs bzip2 cairo cdda cddb cdf cdio cdparanoia cdr cgi chm cilk clang cli cmake collada consolekit contrib cracklib crypt css cups curl cxx daap db dbi dbm dbus declarative designer devhelp device-mapper dga dia digitalradio djvu doc dot dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds egl elf emacs emboss emf encode epiphany evo examples excel exif expat extensions extra extras faac faad fam ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpm fpx ftp fuse gcj gd gdal gdbm gedit geoip geolocation geos gfortran gif gimp git glade glamor glib glpk gml gmp gnome gnome-keyring gnuplot gnutls gold gphoto2 gpm grammar graphics graphtft graphviz grass gsl gstreamer gtk gtk3 gudev guile hddtemp hdf hdf5 hdri html http httpd hvm hwdb iconv icq icu id3tag ide imagemagick imap inotify introspection ipod ipv6 ithreads jadetex java jbig jit john jpeg jpeg2k kate kdepim kdrive kerberos keymap kpathsea kvm ladspa lame lapack latex lcms ldap lensfun libffi libgda libkms libnotify libsamplerate live lm_sensors lua lzma lzo mad mail maildir mapnik math matroska media-library mercurial mikmod mng mod modules mono motif mozilla mp3 mp4 mpeg mpi mpi-threads mplayer mtp multilib multimedia musepack musicbrainz mysql mysqli nautilus ncurses netcdf netpbm network networking nfs nls nntp nptl nsplugin ntfs ntp numpy obex objc ocaml ocr octave odbc ofa ogdi ogg opencl opencv openexr opengl openmp openvg pam pango pcre pda pdf pdl2 perl plasma plotutils plugins png podcast policykit portaudio posix postgres postscript ppds ppp preview-latex proj projectm pstricks pulseaudio python q32 qemu qhull qml qt3support qt4 qt5 quicktime raw readline reiserfs reports rle romio rpc rrdcgi rrdtool rtlsdr sage samba sasl schroedinger science sdk sdl seccomp secure-delete semantic-desktop server session shout sip slang slp smart smbclient smp sms sndfile snmp soap sockets sound soup sox speex spell sql sqlite ssl startup-notification stlport subtitles subversion sudo suexec svg svm swig systemd szip t1lib tbb tcl tcpd tex tex4ht theora thesaurus threads thunderbird tidy tiff tk tools truetype udev udisks unicode upower usb utempter v4l v4l2 vaapi vala valgrind vdpau video vim-syntax virt-network virtualbox visio vorbis vpx vtk wav wayland webdav webdav-serf webkit wmf wxwidgets x264 xa xattr xcb xen xetex xft xine xml xmlreader xmlrpc xpm xv xvid xvmc yaml youtube zlib zsh-completion zvbi" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_core authn_dbm authn_default authn_file authz_core authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info lbmethod_byrequests log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif slotmem_shm so socache_shmcb speling status unique_id unixd userdir usertrack vhost_alias" APACHE2_MPMS="worker" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="canon fuji ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog sensors thermal" CPU_FLAGS_X86="avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" CURL_SSL="nss" ELIBC="glibc" GPSD_PROTOCOLS="aivdm ashtech earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 navcom ntrip oceanserver oncore rtcm104v2 rtcm104v3 sirf superstar2 tnt tripmate tsip ublox nmea0183 nmea2000 passthrough" GRUB_PLATFORMS="emu efi-64 pc xen" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" L10N="de en fr ru" LCD_DEVICES="cfontz hd44780 mtxorb ncurses X lcd2usb lcdlinux png usblcd SureElec" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de en fr ru" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6 php7-0" POSTGRES_TARGETS="postgres9_5" PYTHON_SINGLE_TARGET="python3_5" PYTHON_TARGETS="python2_7 python3_5" QEMU_SOFTMMU_TARGETS="arm i386 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby22" USERLAND="GNU" VIDEO_CARDS="intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS




root@cheetahnew:/root(30)# emerge -pqv '=dev-libs/libtommath-1.0.1::gentoo'
[ebuild     U ] dev-libs/libtommath-1.0.1 [1.0-r1] USE="doc examples -static-libs"
Comment 1 Juergen Rose 2017-12-15 20:15:04 UTC
'USE=-doc MAKEOPTS=-j1 emerge -v1 libtommath' works.
Comment 2 Alexandros Diamantidis 2018-02-04 12:47:45 UTC
Created attachment 517774 [details, diff]
docs patch

The pdf files are in doc/ - the attached patch fixes it for me.
Comment 3 Sven Müller 2019-02-13 20:05:44 UTC
The bug occurs also in libtommath-1.1.0. And to proposed solution works too. 

Why hasn't this solution been applied into the Portage?
Comment 4 Reed Riley 2019-11-18 15:53:21 UTC
`dev-libs/libtommath-1.1.0` was just marked as stable today, and on upgrading I hit this bug.
Comment 5 Jaak Ristioja 2019-11-19 07:45:14 UTC
(In reply to Reed Riley from comment #4)
> `dev-libs/libtommath-1.1.0` was just marked as stable today, and on
> upgrading I hit this bug.

I think I hit the same bug, except that I get a FileNotFoundError:

Traceback (most recent call last):
  File "/usr/lib/portage/python3.6/doins.py", line 611, in <module>
    sys.exit(main(sys.argv[1:]))
  File "/usr/lib/portage/python3.6/doins.py", line 602, in main
    os.path.dirname(source)):
  File "/usr/lib/portage/python3.6/doins.py", line 450, in _doins
    return install_runner.install_file(source, os.path.dirname(dest))
  File "/usr/lib/portage/python3.6/doins.py", line 386, in install_file
    return self._ins_runner.run(source, dest_dir)
  File "/usr/lib/portage/python3.6/doins.py", line 195, in run
    sstat = os.stat(source)
FileNotFoundError: [Errno 2] No such file or directory: b'*.pdf'
Comment 6 Pavel Goran 2020-07-09 02:41:42 UTC
I encountered this problem during system update, too.

The fix is trivial (although I didn't try it), maybe apply it to the portage tree??
Comment 7 Reed Riley 2020-07-09 16:15:29 UTC
I have tried the diff in docs.patch - and it fixed the issue I was hitting.
Comment 8 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2020-07-09 17:21:30 UTC
(In reply to Pavel Goran from comment #6)
> I encountered this problem during system update, too.
> 
> The fix is trivial (although I didn't try it), maybe apply it to the portage
> tree??

I will take care of this when handling bug 723854 shortly. Thank you for your patience.
Comment 9 Larry the Git Cow gentoo-dev 2020-07-14 13:02:32 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=93542edc9ad8811f9adb7a26f1597102f8084328

commit 93542edc9ad8811f9adb7a26f1597102f8084328
Author:     Sam James <sam@gentoo.org>
AuthorDate: 2020-07-10 19:43:37 +0000
Commit:     Sam James <sam@gentoo.org>
CommitDate: 2020-07-14 13:02:12 +0000

    dev-libs/libtommath: bump to 1.2.0
    
    Closes: https://bugs.gentoo.org/723854
    Closes: https://bugs.gentoo.org/641184
    Package-Manager: Portage-2.3.99, Repoman-2.3.22
    Signed-off-by: Sam James <sam@gentoo.org>

 dev-libs/libtommath/Manifest                |  1 +
 dev-libs/libtommath/libtommath-1.2.0.ebuild | 80 +++++++++++++++++++++++++++++
 dev-libs/libtommath/metadata.xml            |  4 +-
 3 files changed, 83 insertions(+), 2 deletions(-)