from clustering.h:38, from clustering.cpp:10: biascorrection.h:18:39: fatal error: boost/tr1/unordered_map.hpp: No such file or directory #include <boost/tr1/unordered_map.hpp> ^ compilation terminated. ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 13.0-desktop_20170905-225247 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-6.4.0 * Available Python interpreters, in order of preference: [1] python3.4 [2] python3.6 (fallback) [3] python2.7 (fallback) [4] jython2.7 (fallback) Available Ruby profiles: [1] ruby22 (with Rubygems) * java-config: The following VMs are available for generation-2: *) IcedTea JDK 3.5.1 [icedtea-bin-8] Available Java Virtual Machines: [1] icedtea-bin-8 system-vm emerge -qpv sci-biology/cufflinks [ebuild N ] sci-biology/cufflinks-2.2.1-r2 USE="-debug"
Created attachment 493912 [details] emerge-info.txt
Created attachment 493914 [details] emerge-history.txt
Created attachment 493916 [details] environment
Created attachment 493918 [details] etc.portage.tbz2
Created attachment 493920 [details] logs.tbz2
Created attachment 493922 [details] sci-biology:cufflinks-2.2.1-r2:20170911-054713.log
Created attachment 493924 [details] temp.tbz2
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e8f6a4c4f1b147290aa62ef45d58084394ae56bd commit e8f6a4c4f1b147290aa62ef45d58084394ae56bd Author: David Seifert <soap@gentoo.org> AuthorDate: 2017-09-16 10:54:51 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2017-09-16 10:58:20 +0000 sci-biology/cufflinks: Fix boost TR1 header include * Also fix missing python dependencies Closes: https://bugs.gentoo.org/630654 Package-Manager: Portage-2.3.8, Repoman-2.3.3 sci-biology/cufflinks/cufflinks-2.2.1-r2.ebuild | 35 +++++++++++++++------- .../cufflinks-2.2.1-boost-1.65-tr1-removal.patch | 14 +++++++++ 2 files changed, 39 insertions(+), 10 deletions(-)
