I just realized the contents of "${W}"/seqan-seqan-v2.2.0/apps/ are not compiled and hence do not appear in "${W}"/seqan-2.2.0_build/ . Something with the cmake rules? Happens also with 1.4.2-r1.
Please attach the logfiles https://wiki.gentoo.org/wiki/Bugzilla/Bug_report_guide#Problems_at_build_time
Created attachment 472756 [details] build.log
Created attachment 472758 [details] equery files seqan
Sorry, I thought @soap will find the problem in the ebuild, I assume it happened when SLOTs were introduced to the package.
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3155495650f555369e58b58f54fc6766e9691f20 commit 3155495650f555369e58b58f54fc6766e9691f20 Author: David Seifert <soap@gentoo.org> AuthorDate: 2018-02-11 12:20:48 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2018-02-11 12:20:48 +0000 sci-biology/seqan: Version bump to 2.4.0 * Add USE=tools option to install command-line tools Closes: https://bugs.gentoo.org/618278 Package-Manager: Portage-2.3.24, Repoman-2.3.6 sci-biology/seqan/Manifest | 1 + .../seqan/files/seqan-2.4.0-fix-pthread.patch | 12 +++ sci-biology/seqan/metadata.xml | 11 ++- sci-biology/seqan/seqan-2.4.0.ebuild | 92 ++++++++++++++++++++++ 4 files changed, 112 insertions(+), 4 deletions(-)
