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Bug 593848 - sci-visualization/kst-2.0.8 : -- Configuring incomplete, errors occurred!
Summary: sci-visualization/kst-2.0.8 : -- Configuring incomplete, errors occurred!
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Qt Bug Alias
URL:
Whiteboard:
Keywords:
: 714078 (view as bug list)
Depends on:
Blocks:
 
Reported: 2016-09-15 07:36 UTC by Toralf Förster
Modified: 2021-09-07 12:52 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
CMakeOutput.log (CMakeOutput.log,43.57 KB, text/plain)
2016-09-15 07:36 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,157.33 KB, text/plain)
2016-09-15 07:36 UTC, Toralf Förster
Details
environment (environment,118.50 KB, text/plain)
2016-09-15 07:36 UTC, Toralf Förster
Details
sci-visualization:kst-2.0.8:20160915-014910.log (sci-visualization:kst-2.0.8:20160915-014910.log,8.09 KB, text/plain)
2016-09-15 07:36 UTC, Toralf Förster
Details
emerge-info.txt (emerge-info.txt,16.73 KB, text/plain)
2018-08-28 18:43 UTC, Toralf Förster
Details
CMakeOutput.log (CMakeOutput.log,48.10 KB, text/plain)
2018-08-28 18:43 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,204.24 KB, text/plain)
2018-08-28 18:43 UTC, Toralf Förster
Details
environment (environment,111.35 KB, text/plain)
2018-08-28 18:43 UTC, Toralf Förster
Details
etc.portage.tbz2 (etc.portage.tbz2,19.98 KB, application/x-bzip)
2018-08-28 18:43 UTC, Toralf Förster
Details
logs.tbz2 (logs.tbz2,4.48 KB, application/x-bzip)
2018-08-28 18:43 UTC, Toralf Förster
Details
sci-visualization:kst-2.0.8:20180614-210317.log (sci-visualization:kst-2.0.8:20180614-210317.log,7.86 KB, text/plain)
2018-08-28 18:43 UTC, Toralf Förster
Details
temp.tbz2 (temp.tbz2,28.05 KB, application/x-bzip)
2018-08-28 18:43 UTC, Toralf Förster
Details
sci-libs:getdata-0.9.0-r1:20180614-210045.log (sci-libs:getdata-0.9.0-r1:20180614-210045.log,107.58 KB, text/plain)
2018-09-05 18:38 UTC, Toralf Förster
Details
kst-2.0.8-qt-5.15.patch (kst-2.0.8-qt-5.15.patch,302 bytes, patch)
2021-04-18 14:12 UTC, J.Borme
Details | Diff
kst-2.0.8-r1.ebuild (kst-2.0.8-r1.ebuild,1.27 KB, text/plain)
2021-04-18 14:14 UTC, J.Borme
Details

Note You need to log in before you can comment on or make changes to this bug.
Description Toralf Förster gentoo-dev 2016-09-15 07:36:30 UTC
    linked by target "kst2_datasource_dirfilesource" in directory /var/tmp/portage/sci-visualization/kst-2.0.8/work/Kst-2.0.8/src/datasources

-- Configuring incomplete, errors occurred!
See also "/var/tmp/portage/sci-visualization/kst-2.0.8/work/kst-2.0.8_build/CMakeFiles/CMakeOutput.log".
 * ERROR: sci-visualization/kst-2.0.8::gentoo failed (configure phase):
 *   cmake failed


$ cat emerge-info.txt
  -----------------------------------------------------------------

  This is an unstable amd64 chroot image (named amd64-desktop-unstable_20160912-100502) at a hardened host acting as a tinderbox.

  -----------------------------------------------------------------
  USE flags ...

  ... in make.conf:
USE="  pax_kernel xtpax -cdinstall -oci8 -bindist bugzilla bzip2 -contrib custom-optimization dbus dec_av2 dnssec drmkms dvd -ecc emacs fluidsynth fpm freetds gcj gif -glamor gles gtk -gtkstyle imlib javascript kvm lapack libvirtd llvm lzma mpeg3 mta multimedia ncurses nscd -odbc opengl openmpi openssl pcre16 pdo pkcs11 -policykit printsupport -pulseaudio qemu qt5 rendering scripts scrypt snmp sqlite3 ssh sslv2 svg swscale system-cairo system-ffmpeg system-harfbuzz szip thinkpad vorbis wav x264 xetex xslt xvfb xz"

  ... in /etc/portage/package.use/*:
  mail-mta/ssmtp      ssl mta
  net-misc/wget       ssl
  app-crypt/pinentry  -qt4
  app-editors/emacs   -dbus -svg -ssl -gtk -gtk3
  app-text/xmlto      -latex
  dev-libs/boehm-gc   threads
  dev-libs/libpcre    pcre16
  dev-qt/qtgui        egl eglfs
  net-nds/openldap    -sasl
  dev-util/cmake      -qt4 -qt5
  dev-vcs/git         -perl
  gnome-base/librsvg  -tools
  media-libs/mesa     -vaapi
  <=net-misc/openssh-7.3_p1-r2    -hpn
  net-misc/iputils -caps -filecaps

  entries in /etc/portage/package.unmask/*:
  media-video/ffmpeg
  -----------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-4.9.3
 [2] x86_64-pc-linux-gnu-5.4.0 *
Available Java Virtual Machines:
  [1]   icedtea-bin-7  system-vm
  [2]   icedtea-bin-8 
Available Python interpreters, in order of preference:
  [1]   python3.4
  [2]   python2.7 (fallback)
Available Ruby profiles:
  [1]   ruby20 (with Rubygems) *
  [2]   ruby21 (with Rubygems)
  -----------------------------------------------------------------

Portage 2.3.0 (python 3.4.5-final-0, default/linux/amd64/13.0/desktop, gcc-5.4.0, glibc-2.23-r2, 4.7.3-hardened x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.7.3-hardened-x86_64-Intel-R-_Core-TM-_i7-3930K_CPU_@_3.20GHz-with-gentoo-2.3
KiB Mem:    65285480 total,  18189664 free
KiB Swap:   67108860 total,  67108860 free
Timestamp of repository gentoo: Thu, 15 Sep 2016 00:46:42 +0000
sh bash 4.3_p46
ld GNU ld (Gentoo 2.26.1 p1.0) 2.26.1
app-shells/bash:          4.3_p46::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.24.0-r1::gentoo
dev-lang/python:          2.7.12::gentoo, 3.4.5::gentoo
dev-util/cmake:           3.6.2::gentoo
dev-util/pkgconfig:       0.29.1::gentoo
sys-apps/baselayout:      2.3::gentoo
sys-apps/openrc:          0.21.7::gentoo
sys-apps/sandbox:         2.10-r2::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r2::gentoo
sys-devel/automake:       1.9.6-r4::gentoo, 1.11.6-r2::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo
sys-devel/binutils:       2.26.1::gentoo
sys-devel/gcc:            4.9.3::gentoo, 5.4.0::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r2::gentoo
sys-devel/make:           4.2.1::gentoo
sys-kernel/linux-headers: 4.7::gentoo (virtual/os-headers)
sys-libs/glibc:           2.23-r2::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: 1

local
    location: /usr/local/portage
    masters: gentoo
    priority: 2

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/tomoyo/conf /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/var/tmp/distfiles"
EMERGE_DEFAULT_OPTS="--verbose --verbose-conflicts --color=n --nospinner --tree --quiet-build"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync network-sandbox parallel-fetch preserve-libs protect-owned sandbox sfperms strict test-fail-continue unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://ftp.uni-erlangen.de/pub/mirrors/gentoo rsync://mirror.netcologne.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gor.bytemark.co.uk/gentoo/ rsync://ftp.snt.utwente.nl/gentoo"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j1"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi alsa amd64 berkdb bluetooth branding bugzilla bzip2 cairo cdda cdr cli consolekit cracklib crypt cups custom-optimization cxx dbus dec_av2 dnssec dri drmkms dts dvd dvdr emacs emboss encode exif fam firefox flac fluidsynth fortran fpm freetds gcj gdbm gif gles gpm gtk iconv imlib ipv6 javascript jpeg kvm lapack lcms ldap libnotify libvirtd llvm lzma mad mmx mmxext mng modules mp3 mp4 mpeg mpeg3 mta multilib multimedia ncurses nls nptl nscd ogg opengl openmp openmpi openssl pam pango pax_kernel pcre pcre16 pdf pdo pkcs11 png ppds printsupport qemu qt3support qt4 qt5 readline rendering scripts scrypt sdl seccomp session snmp spell sqlite3 sse sse2 ssh ssl sslv2 startup-notification svg swscale system-cairo system-ffmpeg system-harfbuzz szip tcpd thinkpad tiff truetype udev udisks unicode upower usb vorbis wav wxwidgets x264 xattr xcb xetex xml xslt xtpax xv xvfb xvid xz zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" L10N="da en-ZA kk tl" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Comment 1 Toralf Förster gentoo-dev 2016-09-15 07:36:33 UTC
Created attachment 445780 [details]
CMakeOutput.log
Comment 2 Toralf Förster gentoo-dev 2016-09-15 07:36:36 UTC
Created attachment 445782 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2016-09-15 07:36:39 UTC
Created attachment 445784 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2016-09-15 07:36:41 UTC
Created attachment 445786 [details]
sci-visualization:kst-2.0.8:20160915-014910.log
Comment 5 Andreas Sturmlechner gentoo-dev 2018-08-28 17:46:43 UTC
Was this ever reproduced?
Comment 6 Toralf Förster gentoo-dev 2018-08-28 18:42:14 UTC
yes, at 17.0-desktop-plasma-systemd_abi32+64_20180608-234206 at 20180614-230454
Comment 7 Toralf Förster gentoo-dev 2018-08-28 18:43:06 UTC
got at the unstable amd64 chroot image 17.0-desktop-plasma-systemd_abi32+64_20180608-234206 this : -- Configuring incomplete, errors occurred!
Comment 8 Toralf Förster gentoo-dev 2018-08-28 18:43:09 UTC
Created attachment 545360 [details]
emerge-info.txt
Comment 9 Toralf Förster gentoo-dev 2018-08-28 18:43:12 UTC
Created attachment 545362 [details]
CMakeOutput.log
Comment 10 Toralf Förster gentoo-dev 2018-08-28 18:43:16 UTC
Created attachment 545364 [details]
emerge-history.txt
Comment 11 Toralf Förster gentoo-dev 2018-08-28 18:43:19 UTC
Created attachment 545366 [details]
environment
Comment 12 Toralf Förster gentoo-dev 2018-08-28 18:43:22 UTC
Created attachment 545368 [details]
etc.portage.tbz2
Comment 13 Toralf Förster gentoo-dev 2018-08-28 18:43:25 UTC
Created attachment 545370 [details]
logs.tbz2
Comment 14 Toralf Förster gentoo-dev 2018-08-28 18:43:28 UTC
Created attachment 545372 [details]
sci-visualization:kst-2.0.8:20180614-210317.log
Comment 15 Toralf Förster gentoo-dev 2018-08-28 18:43:31 UTC
Created attachment 545374 [details]
temp.tbz2
Comment 16 Andreas Sturmlechner gentoo-dev 2018-09-05 18:27:33 UTC
how was sci-libs/getdata built and can you share the content of /usr/lib64/pkgconfig/getdata.pc
Comment 17 Toralf Förster gentoo-dev 2018-09-05 18:37:27 UTC
(In reply to Andreas Sturmlechner from comment #16)
mr-fox / # cat /usr/lib64/pkgconfig/getdata.pc
# GetData pkg-config metadata
prefix=/usr
exec_prefix=${prefix}
libdir=/usr/lib64
includedir=${prefix}/include

Name: GetData
Description: Dirfile Interface Library
Version: 0.9.0
URL: http://getdata.sourceforge.net/
Libs: -L${libdir} -lgetdata
Libs.private: -lm     -lbz2 -lFLAC -lz
Cflags: -I${includedir}
Comment 18 Toralf Förster gentoo-dev 2018-09-05 18:38:09 UTC
Created attachment 546022 [details]
sci-libs:getdata-0.9.0-r1:20180614-210045.log

emerge log og sci-libs/getdata
Comment 19 J.Borme 2021-04-18 14:12:33 UTC
Created attachment 700548 [details, diff]
kst-2.0.8-qt-5.15.patch

kst now emerges at my place, provided:

* ebuild is changed to add USE=cxx to getdata (unless it fails at configure)
* a small patch is added to support qt-5.15
Comment 20 J.Borme 2021-04-18 14:14:16 UTC
Created attachment 700551 [details]
kst-2.0.8-r1.ebuild

Changes to the ebuild

--- kst-2.0.8.ebuild	2018-09-05 19:09:26.000000000 +0100
+++ kst-2.0.8-r1.ebuild	2021-04-18 14:40:07.360818949 +0100
@@ -29,7 +29,7 @@
 	dev-qt/qtwidgets:5
 	dev-qt/qtxml:5
 	sci-libs/cfitsio
-	sci-libs/getdata
+	sci-libs/getdata[cxx]
 	sci-libs/gsl
 	sci-libs/netcdf-cxx:3
 "
@@ -46,6 +46,7 @@
 	"${FILESDIR}/${P}-includes.patch"
 	"${FILESDIR}/${P}-qt-5.11.patch"
 	"${FILESDIR}/${P}-gsl-2.0.patch"
+	"${FILESDIR}/${P}-qt-5.15.patch"
 )
 
 src_configure() {
Comment 21 J.Borme 2021-04-18 14:30:47 UTC
Actually I posted to the wrong bug, it should have been to bug #714078. The error I got was the one in the logs of that bug («The dependency target "Revision" of target "kst2" does not exist.»)
Comment 22 Andreas Sturmlechner gentoo-dev 2021-09-07 12:35:46 UTC
*** Bug 714078 has been marked as a duplicate of this bug. ***
Comment 23 Larry the Git Cow gentoo-dev 2021-09-07 12:52:38 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0dbe576f6001ea47c6062c4208c21361cd8add32

commit 0dbe576f6001ea47c6062c4208c21361cd8add32
Author:     Andreas Sturmlechner <asturm@gentoo.org>
AuthorDate: 2021-09-07 12:36:11 +0000
Commit:     Andreas Sturmlechner <asturm@gentoo.org>
CommitDate: 2021-09-07 12:52:28 +0000

    sci-visualization/kst: Fix FindGetdata.cmake
    
    Closes: https://bugs.gentoo.org/593848
    Package-Manager: Portage-3.0.22, Repoman-3.0.3
    Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>

 .../kst-2.0.8-getdata-drop-bogus-lib_debug.patch   | 23 ++++++++++++++++++++++
 1 file changed, 23 insertions(+)

Additionally, it has been referenced in the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=47d28485c0b9dc3c9f0ae512a7c0ca648edf6c43

commit 47d28485c0b9dc3c9f0ae512a7c0ca648edf6c43
Author:     Andreas Sturmlechner <asturm@gentoo.org>
AuthorDate: 2021-09-07 12:47:43 +0000
Commit:     Andreas Sturmlechner <asturm@gentoo.org>
CommitDate: 2021-09-07 12:52:29 +0000

    sci-visualization/kst: Fix dependencies, add missing usedep
    
    Drop unused dev-qt/qtopengl:5
    Add missing slot op to sci-libs/cfitsio
    Add missing sci-libs/matio (fixes automagic dep after it was packaged)
    
    Thanks-to: Jérôme Borme <jerome.borme@laposte.net>
    Bug: https://bugs.gentoo.org/593848
    Package-Manager: Portage-3.0.22, Repoman-3.0.3
    Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>

 sci-visualization/kst/{kst-2.0.8-r1.ebuild => kst-2.0.8-r2.ebuild} | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8b6c60dd4d1e2c2396b9eb4cb15de30d1a503fb5

commit 8b6c60dd4d1e2c2396b9eb4cb15de30d1a503fb5
Author:     Andreas Sturmlechner <asturm@gentoo.org>
AuthorDate: 2021-09-07 12:39:55 +0000
Commit:     Andreas Sturmlechner <asturm@gentoo.org>
CommitDate: 2021-09-07 12:52:29 +0000

    sci-visualization/kst: Fix build with Qt 5.15
    
    Thanks-to: Jérôme Borme <jerome.borme@laposte.net>
    Bug: https://bugs.gentoo.org/593848
    Package-Manager: Portage-3.0.22, Repoman-3.0.3
    Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>

 sci-visualization/kst/files/kst-2.0.8-qt-5.15.patch | 10 ++++++++++
 sci-visualization/kst/kst-2.0.8-r1.ebuild           |  2 ++
 2 files changed, 12 insertions(+)