I'm currently doing an install of Gentoo 1.4, and am trying to emerge gnome (emerge as in "download and compile"). The problem I am having is that the install of one of the required packages (gnome-base/gnome-panel-2.2.2.1) fails with errors. Reproducible: Always Steps to Reproduce: emerge gnome-base/gnome Actual Results: The problem occurs when the following build command is executed: for file in clock-C.omf; do \ /bin/install -c -m 644 $file.out /var/tmp/portage/<rest-of-path>/$file; \ done This yields the following error: /bin/install: cannot stat 'clock-C.omf.out': No such file or directory This error bubbles up the various make levels, and causes the emerge to fail with the following text: !!! ERROR: gnome-base/gnome-panel-2.2.2.1 failed. !!! Function einstall, Line 343, Exitcode 2 !!! einstall failed Expected Results: It should have completed the install of gnome-panel, and continued emerge of gnome packages (I somehow feel rather stupid telling you this...) Portage 2.0.48-r5 (default-x86-1.4, gcc-3.2.3, glibc-2.3.2-r1) ================================================================= System uname: 2.4.21-gss i686 AMD Athlon(TM) XP1800+ GENTOO_MIRRORS="http://gentoo.oregonstate.edu http://distro.ibiblio.org/pub/Linux/distributions/gentoo" CONFIG_PROTECT="/etc /var/qmail/control /usr/share/config /usr/kde/2/share/confi g /usr/kde/3/share/config" CONFIG_PROTECT_MASK="/etc/gconf /etc/env.d" PORTDIR="/usr/portage" DISTDIR="/usr/portage/distfiles" PKGDIR="/usr/portage/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR_OVERLAY="" USE="x86 oss 3dnow apm avi crypt cups encode foomaticdb gif jpeg gnome libg++ libwww mad mikmod mmx mpeg ncurses nls pdflib png quicktime slang spell truetype xml2 xmms xv zlib gdbm berkdb readline arts svga java X sdl gpm tcpd pam ssl perl python esd imlib oggvorbis gtk qt kde motif opengl" COMPILER="gcc3" CHOST="i686-pc-linux-gnu" CFLAGS="-O3 -march=athlon-xp -funroll-loops -fprefetch-loop-arrays -pipe" CXXFLAGS="-O3 -march=athlon-xp -funroll-loops -fprefetch-loop-arrays -pipe" ACCEPT_KEYWORDS="x86" MAKEOPTS="-j2" AUTOCLEAN="yes" SYNC="rsync://rsync.gentoo.org/gentoo-portage" FEATURES="sandbox ccache"
first of all try lowering your optimizations, second please give us the relevant part of the breaking output.
Created attachment 15985 [details] Session log of emerge gnome This is a session log of an emerge gnome, which I am sure contains "the relevant part of the breaking output" you asked for.
Created attachment 15986 [details] Session log of emerge gnome This is a session log of an emerge gnome, which I am sure contains "the relevant part of the breaking output" you asked for.
In response to your suggestion, I'd like to know what I would have to change my optimizations to. The point is that I am using the default optimizations of the Athlon XP LiveCD. I would think those should work?
the log you gave shows a completed gnome-panel install and now it breaks in a similar manner on gnome-utils . I'd say this is some sort of problem on your side, if it's not exactly reproducable its most likely a machine specific problem. The gentoo default optimizations should work, but are not guaranteed to work everywhere or anywhere afaic. Try rebuilding scrollkeeper with conservative CFLAGS , thats the app that handles omf related stuff. Some sort of corruption might be the cause.
I am having the same exact problem. I am also running an AMD Athlon XP 1800+ with the Athlon XP CD's.. I have made no CHOST flag changes. This is a stock Athlon XP gentoo cd install starting with stage3. One thing I did notice somewhere around that error was this.. ( I apologize I hand wrote it down on paper and am copying it here ) /bin/install -c -m 644 $file.out /var/tmp/portage/gnome-panel/image//usr/share notice the dual "//" between image and usr. It looks like the build script or something has a typo. After re-trying: emerge gnome two more times it finally went through and ended up having another error somewhere down in gnome-extras or utils.. restarted and now it past that and now it's happening on gnome-games. I apologize for the lack of actual text, I had to boot into windows to send this off. Hope this helps somewhat.
dual / in a path is completely ok and will not cause a trouble. try ls -l /usr//share////doc for example
I did some more investigation into what actually happens, and I found out that the root cause of the errors are core dumps of scrollkeeper. When I tried to rebuild scrollkeeper (and other packages) and looked closely, I found that core dumps were happening all over the place. The motherboard of the system we are talking about has a VIA KT266A chipset, which is known to cause stability issues under certain circumstances. I can't be sure that the issues I am having are not caused by the chipset, so I decided to give up on installing Gentoo on this box (RedHat and SuSE work like a charm on this system.) I guess Gentoo is not ready (yet) for the particular configuration I tried to run it on.
/bin/sh ../../../mkinstalldirs /var/tmp/portage/gnome-panel-2.2.2.2-r30/image//usr/share/omf/gnome-panel for file in fish-applet-2-C.omf; do \ /bin/install -c -m 644 $file.out /var/tmp/portage/gnome-panel-2.2.2.2-r30/image//usr/share/omf/gnome-panel/$file; \ done /bin/install: cannot stat `fish-applet-2-C.omf.out': No such file or directory make[5]: *** [install-data-hook-omf] Error 1 make[5]: Leaving directory `/var/tmp/portage/gnome-panel-2.2.2.2-r30/work/gnome-panel-2.2.2.2/help/C/fish' make[4]: *** [install-data-am] Error 2
update - rebooted, tried again and it worked... no clue whats happening here.
There's all kinds of gnome packages that won't install properly, reguardless of your build flags. Here's what you do: Downgrade to gtk-2.2.1-r1 : this fixes some of the problems people have had AFTER compiling. Downgrade to scrollkeeper-0.3.11-r1 : this fixes the problems when emerging the packages This should allow you to emerge and run the gnome packages properly. Milage may vary according to flags and setup, but this should fix alot of the problems. :)
[ bugwranglers, this seems to be a GRP 'problem', please give it to them so they know about these possible issues. The gnome team can't be of any more help here. ] i'm quite sure its system dependant. You might want to try a less optimized GRP cd and see if that behaves better (in that case your hardware config certainly is to blame). The problem may even be one core lib that misbehaves on this hardware in particular situations. The fact that binary distros work sais nothing, Gentoo stresses the system in other ways than you general distro, especially during builds. I had this machine i couldnt compile 1 thing on -it always segfaulted after a while-, but with binaries it did its work just fine if not stressed too much. #11, you are talking about downgrading gtk+ to 2.2.1-r1 , this is testing profile. Not our suggested use for general users. Same goes for scrollkeeper. Besides that i think it's the recompilation that solves problems, not the specific version. I think we better report this to the GRP folks, there is nothing we can do here.
I don't think this is totally a GRP problem. I was building from stage2 when I ran into these problems. The gnome packages build just fine, it's only when the scripts attempted to use scrollkeeper that errors prevented the full install. The errors, reguardless of the package, always start with the lines: /bin/install: cannot stat `<any_file_name_here>.omf.out': No such file or directory make[x]: *** [install-data-hook-omf] Error 1 When I changed the scrollkeeper version the omf files were handled properly. Lots of people here seem to be using Athlon-XP. Perhaps the -march=athlon-xp flag causes scrollkeeper to build improperly?
I'm now experiencing the same problem. I had big problems trying to emerge scrollkeeper, and then with gnome-terminal. Turning down the optimisations worked. I have seen some other people on different packages having problems emerging gnome because of problems with omf files. Seems that scollkeeper might be the root of all evils here.
Just changed my kernel config to Athlon rather than i386 in the hope of fixing it. No change. Several of my friends (all with about a year's gentoo experience) are trying to emerge Gnome on a brand new system, all of them are failing. Gnome appears to be broken for many users. This PC has been running Gentoo for about 2 years, same hardware, same CFLAGS, with no problems.
I am having the exact same problem, except it's gnome-panel-2.2.2.2. I'm using a Soyo Dragon Plus motherboard w/Athlon XP 1700+. Gnome will not emerge from the GRP CD nor after an rsync. Have already tried updating everything beyond the initial install, have not touched optimizations or USE flags.
and rebuilding scrollkeeper, updating it to the ~ version or building it without CFLAGS set doesn't make it stop crashing ?
I concluded that the CFLAGS: -funroll-loops -fprefetch-loop-arrays combined with an Athlon architecture are incompatible with GNOME, or at least scrollkeeper. I took out these two CFLAGS, rebuilt my whole system (emerge -e world), and everything worked. These 2 flags seem to be too aggressive for the default settings, especially on this processor.
*** Bug 27505 has been marked as a duplicate of this bug. ***
are all problem reporters here using -march=athlon-xp ? Can we -with some certainty- say that the problem is athlon-xp specific, maybe in combination with the CFLAGS in #18 ?
I can confirm that I was using -march=athlon-xp.
I too am using an athlon-xp and am having the same problems. I'm installing from the athlon-xp stage 1 tarball and am not changing *any* stock settings (cflags, use, etc). Haven't yet found a solution.
and recompiling scrollkeeper with eg. '-march=i686' solves the problem ? Is your machine recently installed and from what stage ?
I have the same problems too (on an Athlon XP). I installed from stage 2. Recompiling scrollkeeper even with -march=i386 or i686 without any optimization does not help. In my case it may 'emerge' but the result is corrupted anyway. The resulting binary - tested by calling scrollkeeper-update - crashes with SEGFAULT not on every call but quite often. This is happening not only with scrollkeeper-0.3.11-r1, but also with 0.3.12 I tried the binary scrollkeeper-0.3.11-r1 from the Athlon GRP CD, but it chrashs as well!
and CFLAGS empty ? and the optimizations mentioned in #18 removed (if you have them ) ? The problem here i haven't seen one coherent result, yes there's a problem with march=athlon-xp , but i have seen different possible solutions. One works here, but not there. I can't do much with this. Be more verbose on CFLAGS and results related to them.
> and CFLAGS empty ? and the optimizations mentioned in #18 removed (if you have > them ) ? Exactly. Scrollkeeper often segfaults even with empty CFLAGS when I had the optimizations mentioned in #18 for everything else. But I looked at the call stack and found scrollkeeper-update was chrashing deep in libxml2 functions. Well, after trying various CFLAGS I can conclude the following: The CFLAGS="-O3 -march=athlon-xp -fprefetch-loop-arrays -funroll-loops" are incompatible with libxml2 at the moment. (libxml2-2.5.8) Compiling everything else (including scrollkeeper) with these CFLAGS seems ok, but lower them while emerging libxml2. Setting CFLAGS="-O3 -march=athlon-xp -fprefetch-loop-arrays " or CFLAGS="-O3 -march=athlon-xp -funroll-loops" while emerging libxml2 seems to work. Maybe someone out there, who still is having trouble, can confirm that reemering libxml2 with lowered CFLAGS solves his problems.
*** Bug 28597 has been marked as a duplicate of this bug. ***
Great work in #26 mr.Scholz, can anyone else confirm that lowering CFLAGS for libxml2 solves the problem ? If so, we can do some flag stripping in that ebuild.
I have compiled libxml2-2.5.11 with CFLAGS="-mcpu=athlon-xp -O3 -pipe" but I still had problems with emergeing eog-2.4.0 but then I noticed that I hadn't installed scrollkeeper. And after installing scrollkeeper, eog-2.4.0 emerged fine. Please notice that everything on my system is emerged with CFLAGS="-mcpu=athlon-xp -O3 -pipe" So I guess it supports the theory in #26
I just rebuilt my entire system (including gnome) with CFLAGS="-O3 -march=athlon-xp -funroll-loops -fprefetch-loop-arrays -pipe", except for libxml2, which I emerged with CFLAGS="-O3 -march=athlon-xp -pipe". This time, I was able to get gnome to emerge (and run) properly. So I guess it seems that mr. Scholz hit the nail right on the head!
*** Bug 28708 has been marked as a duplicate of this bug. ***
Okay. I am running an athlon XP 1800+ system (dual). I saw all of these same problems (that last dupe was my bug). Before, I was unable to emerge many apps, with similar errors as scattered in this bug. I was able to emerge gnome-2.4.0 by emerging libxml2 withOUT the following two CFLAGS: -funroll-loops -fprefetch-loop-arrays . I did not have to recompile scrollkeeper. I am not sure if it's one, or both, of those flags causing problems on XP. # emerge info Portage 2.0.49-r3 (default-x86-1.4, gcc-3.2.3, glibc-2.3.2-r1, 2.4.22) ================================================================= System uname: 2.4.22 i686 AMD Athlon(TM) XP 1800+ ccache version 2.2 [enabled] ACCEPT_KEYWORDS="x86 ~x86" AUTOCLEAN="yes" CFLAGS="-O3 -march=athlon-xp -funroll-loops -fprefetch-loop-arrays -pipe -mmmx -msse -m3dnow -mfpmath=sse,387" CHOST="i686-pc-linux-gnu" COMPILER="gcc3" CONFIG_PROTECT="/etc /var/qmail/control /usr/share/config /usr/kde/2/share/config /usr/kde/3/share/config /usr/X11R6/lib/X11/xkb" CONFIG_PROTECT_MASK="/etc/gconf /etc/env.d" CXXFLAGS="-O3 -march=athlon-xp -funroll-loops -fprefetch-loop-arrays -pipe -mmmx -msse -m3dnow -mfpmath=sse,387" DISTDIR="/usr/portage/distfiles" FEATURES="sandbox autoaddcvs ccache buildpkg notitle" GENTOO_MIRRORS="ftp://ftp.ussg.iu.edu/pub/linux/gentoo http://mirrors.tds.net/gentoo ftp://mirrors.tds.net/gentoo ftp://gentoo.noved.org/ http://gentoo.mirrors.pair.com/ ftp://gentoo.mirrors.pair.com/ http://gentoo.seren.com/gentoo http://gentoo.noved.org/ ftp://csociety-ftp.ecn.purdue.edu/pub/gentoo/ ftp://ftp.gtlib.cc.gatech.edu/pub/gentoo" MAKEOPTS="-j3" PKGDIR="/usr/portage/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="x86 oss apm avi crypt cups foomaticdb gif jpeg libg++ libwww mad mikmod mpeg ncurses nls png quicktime sdl slang spell xml2 xv zlib gdbm berkdb readline svga java tcpd pam ssl python esd imlib qt motif opengl mozilla X gtk gtk2 gpm gnome 3dnow cdr encode kde mmx oggvorbis pdflib perl sse tiff truetype xmms -arts -ipv6" Keep up the great work, guys! Thank you to norelent and foser for assisting me in the Gentoo IRC channel. norelent may post his own results here soon.
I always forget one last comment, I swear. Just a note that on the 1.4 athlon-xp cd1, both of the suspect flags, -funroll-loops and -fprefetch-loop-arrays are in the default USE settings. Therefore, anyone on an athlon-xp who goes with the default USE settings may run into these errors. Might want to topic that one in the IRC channel if this is confirmed.
The new 20030911 builds of the athlon-xp CDS that have just been put on the mirrors have been built with "-O2" (that's it.) We'll try bumping it up to -O3 after doing a good deal of testing. For now, I think we can have the GNOME team put some kind of CFLAGS protection in the right packages and then we can close this bug. It's not a 1.4 issue anymore.
If I can do anything to help, please let me know. Rather speedy system.
*** Bug 26591 has been marked as a duplicate of this bug. ***
I've just added the filter-flags to the newest stable and ~x86 libxml2 versions. Joe, would you be able to test emerging libxml2 with -funroll-loops and -fprefetch-loop-array in your CFLAGS?
This worked for me (as I emailed you since BZ was acting up)
thanks .. well, i think this is the end of this issue.
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1067e17e4efba72be0f319f3fca8f777f0572a5f commit 1067e17e4efba72be0f319f3fca8f777f0572a5f Author: Sam James <sam@gentoo.org> AuthorDate: 2024-06-24 00:00:28 +0000 Commit: Sam James <sam@gentoo.org> CommitDate: 2024-06-24 00:10:48 +0000 dev-libs/libxml2: drop obsolete filter-flags Bug: https://bugs.gentoo.org/26320 Signed-off-by: Sam James <sam@gentoo.org> dev-libs/libxml2/libxml2-9999.ebuild | 5 +---- 1 file changed, 1 insertion(+), 4 deletions(-)
