303160 – dev-python/scientificpython: needs mpi wrappers if compiled with sci-libs/netcdf[mpi]

Bug 303160 - dev-python/scientificpython: needs mpi wrappers if compiled with sci-libs/netcdf[mpi]

Summary: dev-python/scientificpython: needs mpi wrappers if compiled with sci-libs/net...

Status:	RESOLVED FIXED

Alias:	None

Product:	Gentoo Linux
Classification:	Unclassified
Component:	Current packages (show other bugs)
Hardware:	All Linux

Importance:	High normal (vote)
Assignee:	Gentoo Science Related Packages

URL:
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Keywords:

Depends on:
Blocks:	302621
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Reported:	2010-02-01 23:07 UTC by Kacper Kowalik (Xarthisius) (RETIRED)
Modified:	2010-03-09 15:56 UTC (History)
CC List:	2 users (show)

See Also:
Package list:
Runtime testing required:	---

Attachments
build log (scientificpython-2.9:01022010.log,10.54 KB, text/plain) 2010-02-01 23:07 UTC, Kacper Kowalik (Xarthisius) (RETIRED)	Details
emerge --info (shakuras.info,3.70 KB, text/plain) 2010-02-01 23:08 UTC, Kacper Kowalik (Xarthisius) (RETIRED)	Details
adding patch to ebuild (scientificpython-2.9.diff,499 bytes, patch) 2010-02-02 13:50 UTC, Kacper Kowalik (Xarthisius) (RETIRED)	Details \| Diff
adding mpicc flags for netcdf module (scientificpython-2.9-mpi-netcdf.patch,2.19 KB, patch) 2010-02-02 13:51 UTC, Kacper Kowalik (Xarthisius) (RETIRED)	Details \| Diff
adding mpicc flags for netcdf module (better way) (scientificpython-2.9-mpi-netcdf.patch,1.32 KB, patch) 2010-02-02 14:01 UTC, Kacper Kowalik (Xarthisius) (RETIRED)	Details \| Diff
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Description Kacper Kowalik (Xarthisius) (RETIRED) gentoo-dev

2010-02-01 23:07:14 UTC

Scientificpython needs to be compiled with mpi wrapper if sci-libs/netcdf[mpi], otherwise it fails to build.

Comment 1 Kacper Kowalik (Xarthisius) (RETIRED) gentoo-dev

2010-02-01 23:07:39 UTC

Created attachment 218116 [details]
build log

Comment 2 Kacper Kowalik (Xarthisius) (RETIRED) gentoo-dev

2010-02-01 23:08:15 UTC

Created attachment 218118 [details]
emerge --info

Comment 3 Kacper Kowalik (Xarthisius) (RETIRED) gentoo-dev

2010-02-02 13:50:24 UTC

Created attachment 218171 [details, diff]
adding patch to ebuild

Comment 4 Kacper Kowalik (Xarthisius) (RETIRED) gentoo-dev

2010-02-02 13:51:00 UTC

Created attachment 218173 [details, diff]
adding mpicc flags for netcdf module

Comment 5 Kacper Kowalik (Xarthisius) (RETIRED) gentoo-dev

2010-02-02 14:01:07 UTC

Created attachment 218177 [details, diff]
adding mpicc flags for netcdf module (better way)

Comment 6 Sébastien Fabbro (RETIRED) gentoo-dev

2010-02-02 17:03:21 UTC

Now fixed in cvs, thanks.

Comment 7 Steve Arnold archtester

2010-03-04 01:33:32 UTC

Um, this fix actually broke my world update.  I had to revert the netcdf patch in my local overlay to make it build successfully.  Note that I do not have openmpi installed, rather I have a perfectly working mpich2 install.  This seems to lend some weight to my argument against patching other ebuilds to try to work around a broken openmpi library.  This current approach is bad juju...

Comment 8 Justin Lecher (RETIRED) gentoo-dev

2010-03-09 08:15:29 UTC

netcdf lost its mpi USE. I removed the USEdep. If you want a different solution, please correct it.

Comment 9 Sébastien Fabbro (RETIRED) gentoo-dev

2010-03-09 15:56:38 UTC

Sorry about the messy fix previously. Anyway, reclosing.