s939 ~ # emerge -pv openbabel These are the packages that would be merged, in order: Calculating dependencies... done! [ebuild N ] sci-chemistry/openbabel-2.1.1 0 kB Total: 1 package (1 new), Size of downloads: 0 kB s939 ~ # emerge --info Portage 2.1.3.19 (!/usr/portage/profiles/default-linux/amd64/2007.0, gcc-4.2.2, glibc-2.7-r1, 2.6.23-gentoo-r4-s939 x86_64) ================================================================= System uname: 2.6.23-gentoo-r4-s939 x86_64 AMD Athlon(tm) 64 Processor 3500+ Timestamp of tree: Fri, 18 Jan 2008 16:30:08 +0000 distcc 2.18.3 x86_64-pc-linux-gnu (protocols 1 and 2) (default port 3632) [disabled] ccache version 2.4 [enabled] app-shells/bash: 3.2_p17-r1 dev-java/java-config: 1.3.7, 2.0.33-r1 dev-lang/python: 2.4.4-r6 dev-python/pycrypto: 2.0.1-r6 dev-util/ccache: 2.4-r7 sys-apps/baselayout: 1.12.10-r5 sys-apps/sandbox: 1.2.18.1-r2 sys-devel/autoconf: 2.13, 2.61-r1 sys-devel/automake: 1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10 sys-devel/binutils: 2.18.50.0.3 sys-devel/gcc-config: 1.4.0-r4 sys-devel/libtool: 1.5.24 virtual/os-headers: 2.6.23-r2 ACCEPT_KEYWORDS="amd64" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe -fomit-frame-pointer" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/lib/fax /usr/share/X11/xkb /usr/share/config /var/spool/fax/etc" CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/terminfo /etc/texmf/web2c /etc/udev/rules.d" CXXFLAGS="-march=native -O2 -pipe -fomit-frame-pointer" DISTDIR="/tmp/gentoo-tmp/distfiles" FEATURES="buildpkg ccache distlocks fixpackages metadata-transfer parallel-fetch sandbox sfperms strict unmerge-orphans userfetch" GENTOO_MIRRORS="http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ http://gd.tuwien.ac.at/opsys/linux/gentoo/ http://www.mirrorservice.org/sites/www.ibiblio.org/gentoo/ http://mirrors.sec.informatik.tu-darmstadt.de/gentoo/ http://mirror.ovh.net/gentoo-distfiles/" LANG="it_IT@euro" LC_ALL="it_IT.UTF-8" LDFLAGS="-Wl,-O1,--as-needed" LINGUAS="it en_GB" MAKEOPTS="-j3 -s" PKGDIR="/tmp/gentoo-tmp/packages64" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --filter=H_**/files/digest-*" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/tmp/gentoo-tmp/portage" PORTDIR_OVERLAY="/usr/portage/local/layman/gechi /usr/portage/local/layman/sunrise /usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="3dnow 3dnowext X a52 aac aalib acl acpi alsa amd64 aotuv apache2 asf audiofile avi bash-completion beagle berkdb bitmap-fonts branding browserplugin bzip2 bzlib cairo caps cddb cdparanoia cdr chroot cli cpdflib cpudetection cracklib crypt cspell cups curl dba dbus dga directfb djvu dlloader dmi dri dv dvd dvdr dvdread dvx4linux eds encode esd exif expat fam fbcon ffmpeg flac foomaticdb fortran fpx ftp gd gdbm ggvorbis gif gimp gmp gnome gphoto2 gpm graphviz gstreamer gtk gtkhtml hal htmlhandbook iconv ieee1394 imlib innodb isdnlog jack java javascript jbig jikes jpeg jpeg2k kde kdeenablefinal kdehiddenvisibility kdexdeltas ladspa lame lcms ldap libcaca live lm_sensors lzo mad mailwrapper md5sum memlimit midi mikmod mime mmx mng motif mozilla mp3 mpeg mplayer mssql mudflap mysql mythtv nas ncurses network newspr nls nptl nptlonly nsplugin nvidia ogg openexr opengl openmp oss pam pam_chroot pam_timestamp pcmcia pcre pdf perl php png portaudio posix ppds pppd pulseaudio pwdb python qt qt3 qt4 quicktime readline reflection rle rtc samba scanner sdl seamonkey session slang speex spell spl sse sse2 ssl svg sysfs tcltk tcpd tetex tga theora tidy tiff tokenizer trace truetype truetype-fonts type1-fonts udev unicode urandom usb userlocales utempter vim-syntax vnc vorbis wmf xcb xcomposite xine xml xml2 xmlreader xmlwriter xorg xpm xprint xv xvid xvmc zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="keyboard mouse evdev void" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="it en_GB" USERLAND="GNU" VIDEO_CARDS="nvidia vesa nv vga" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS s939 ~ #
Created attachment 141237 [details] emerge log
Take a look at line 152 in /var/tmp/portage/sci-chemistry/openbabel-2.1.1/work/openbabel-2.1.1/Makefile You'll see it's complaining that "eselect wxconfig set <profile> needs to be run. You can do something like "eselect wxwidgets set gtk2-unicode-release-2.8" and it'll work.
thank you. may it be useful to add some kind of warning for dummies such me? looking at the log output, I've now found also the line: "checking wxWidgets version... not found" but it's difficult to understand if you don't know the problem.
This ebuilds needs quite some fixing... - automagic dependencies on zlib, libxml2, swig, perl, python, ruby - also if don't actually want to support the wxGTK GUI, then hard-disable it, otherwise make it a use flag and inherit wxwidgets eclass, so that people won't have to mess with eselect wxwidgets in the first place.
I believe I've added all dependencies needed to the new openbabel-2.2.0 ebuild. Please re-open if you feel that there are still some missing. The wxwindows problem should be fixed as well. Best, Markus
