* Determine new optimal TMPFS value: [ 3017M ] * Mounting /var/tmp/portage/sci-chemistry/openbabel-2.1.1 of [ 3017M ] ...  [ ok ] * Please remember that ccache data dir is outside the newly mounted * portage temporary directory, to preserve the spool between merges. >>> Unpacking source... >>> Unpacking openbabel-2.1.1.tar.gz to /var/tmp/portage/sci-chemistry/openbabel-2.1.1/work >>> Source unpacked. >>> Compiling source in /var/tmp/portage/sci-chemistry/openbabel-2.1.1/work/openbabel-2.1.1 ... * econf: updating openbabel-2.1.1/config.sub with /usr/share/gnuconfig/config.sub * econf: updating openbabel-2.1.1/config.guess with /usr/share/gnuconfig/config.guess ./configure --prefix=/usr --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --build=x86_64-pc-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether to enable maintainer-specific portions of Makefiles... no checking auto silent in maintainer mode... auto-sleep-9 checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed checking for style of include used by make... 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Have a look at http://www.doxygen.org/ checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking whether ln -s works... yes checking how to recognise dependent libraries... pass_all checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E checking for x86_64-pc-linux-gnu-g77... no checking for x86_64-pc-linux-gnu-xlf... no checking for x86_64-pc-linux-gnu-f77... no checking for x86_64-pc-linux-gnu-frt... no checking for x86_64-pc-linux-gnu-pgf77... no checking for x86_64-pc-linux-gnu-cf77... no checking for x86_64-pc-linux-gnu-fort77... no checking for x86_64-pc-linux-gnu-fl32... no checking for x86_64-pc-linux-gnu-af77... no checking for x86_64-pc-linux-gnu-xlf90... no checking for x86_64-pc-linux-gnu-f90... no checking for x86_64-pc-linux-gnu-pgf90... no checking for x86_64-pc-linux-gnu-pghpf... no checking for x86_64-pc-linux-gnu-epcf90... no checking for x86_64-pc-linux-gnu-gfortran... x86_64-pc-linux-gnu-gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes checking the maximum length of command line arguments... 32768 checking command to parse /usr/bin/nm -B output from x86_64-pc-linux-gnu-gcc object... ok checking for objdir... .libs checking for x86_64-pc-linux-gnu-ar... x86_64-pc-linux-gnu-ar checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC works... yes checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... 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GNU/Linux ld.so checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether byte ordering is bigendian... no checking for asin in -lm... yes checking for dlopen in -lc... no checking for dlopen in -ldl... (cached) yes checking for xml2-config... /usr/bin/xml2-config checking for libxml - version >= 2.6.5... yes (version 2.6.30) checking for GetINCHI in -linchi... no checking if zlib is wanted... checking for inflateEnd in -lz... yes checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking iconv.h usability... yes checking iconv.h presence... yes checking for iconv.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes checking for stdlib.h... (cached) yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking conio.h usability... no checking conio.h presence... no checking for conio.h... no checking for string.h... (cached) yes checking strstream.h usability... no checking strstream.h presence... no checking for strstream.h... no checking iostream.h usability... yes checking iostream.h presence... yes checking for iostream.h... yes checking fstream.h usability... yes checking fstream.h presence... yes checking for fstream.h... yes checking math.h usability... yes checking math.h presence... yes checking for math.h... yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking ctype.h usability... yes checking ctype.h presence... yes checking for ctype.h... yes checking iostream usability... yes checking iostream presence... yes checking for iostream... yes checking fstream usability... yes checking fstream presence... yes checking for fstream... yes checking sstream usability... yes checking sstream presence... yes checking for sstream... yes checking strstream usability... yes checking strstream presence... yes checking for strstream... yes checking whether time.h and sys/time.h may both be included... yes checking for clock_t... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for rint... yes checking for sranddev... no checking for snprintf... yes checking for strncasecmp... yes checking whether scandir needs a const cast... yes configure: creating ./config.status config.status: creating Makefile config.status: creating data/Makefile config.status: creating src/Makefile config.status: creating src/math/Makefile config.status: creating src/formats/Makefile config.status: creating src/fingerprints/Makefile config.status: creating src/formats/xml/Makefile config.status: creating src/formats/inchi/Makefile config.status: creating src/forcefields/Makefile config.status: creating src/GUI/Makefile config.status: creating include/Makefile config.status: creating include/openbabel/Makefile config.status: creating include/openbabel/math/Makefile config.status: creating test/Makefile config.status: creating test/cmltest/Makefile config.status: creating tools/Makefile config.status: creating doc/Makefile config.status: creating scripts/Makefile config.status: creating openbabel-2.0.pc config.status: creating src/config.h config.status: executing depfiles commands config.status: executing include/openbabel/babelconfig.h commands Makefile:152: *** missing separator. Stop. * * ERROR: sci-chemistry/openbabel-2.1.1 failed. * Call stack: * ebuild.sh, line 1701: Called dyn_compile * ebuild.sh, line 1039: Called qa_call 'src_compile' * ebuild.sh, line 44: Called src_compile * ebuild.sh, line 711: Called die * The specific snippet of code: * emake || die "emake failed" * The die message: * emake failed * * If you need support, post the topmost build error, and the call stack if relevant. * A complete build log is located at '/var/log/portage/sci-chemistry:openbabel-2.1.1:20080118-203342.log'. *