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Bug 874069

Summary: sci-biology/stride-20011129-r1 - p_atom.c: error: type specifier missing, defaults to int; ISO C99 and
Product: Gentoo Linux Reporter: Toralf Förster <toralf>
Component: Current packagesAssignee: Gentoo Science Biology related packages <sci-biology>
Status: RESOLVED FIXED    
Severity: normal    
Priority: Normal    
Version: unspecified   
Hardware: All   
OS: Linux   
Whiteboard:
Package list:
Runtime testing required: ---
Bug Depends on:    
Bug Blocks: 870412    
Attachments: emerge-info.txt
emerge-history.txt
environment
etc.portage.tar.bz2
logs.tar.bz2
sci-biology:stride-20011129-r1:20221002-134208.log

Description Toralf Förster gentoo-dev 2022-10-02 14:47:06 UTC
clang -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int   -c -o p_rem.o p_rem.c
1 warning generated.
clang -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int   -c -o p_atom.o p_atom.c
clang -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int   -c -o p_helix.o p_helix.c
p_atom.c:12:12: error: type specifier missing, defaults to 'int'; ISO C99 and
      later do not support implicit int [-Werror,-Wimplicit-int]
  register i;

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.1_desktop_plasma_systemd-j4-20221001-190003

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-12.2.0 *
clang/llvm (if any):
clang version 15.0.1
Target: x86_64-pc-linux-gnu
Thread model: posix
InstalledDir: /usr/lib/llvm/15/bin
/usr/lib/llvm/15
15.0.1
Python 3.10.7
Available Ruby profiles:
  [1]   ruby30 *
Available Rust versions:
  [1]   rust-bin-1.64.0 *
The following VMs are available for generation-2:
1)	OpenJDK 17.0.5_p5 [openjdk-17]
*)	Eclipse Temurin JDK 17.0.4.1_p1 [openjdk-bin-17]
3)	Eclipse Temurin JDK 8.345_p01 [openjdk-bin-8]
Available Java Virtual Machines:
  [1]   openjdk-17 
  [2]   openjdk-bin-8 
  [3]   openjdk-bin-17  system-vm

The Glorious Glasgow Haskell Compilation System, version 9.0.2
php cli (if any):
GNU Make 4.3

  HEAD of ::gentoo
commit ffd974ef87604e20495370342e9dbcb42a4dbc82
Author: Repository mirror & CI <repomirrorci@gentoo.org>
Date:   Sun Oct 2 11:31:48 2022 +0000

    2022-10-02 11:31:48 UTC

emerge -qpvO sci-biology/stride
[ebuild  N    ] sci-biology/stride-20011129-r1
Comment 1 Toralf Förster gentoo-dev 2022-10-02 14:47:07 UTC
Created attachment 815533 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2022-10-02 14:47:09 UTC
Created attachment 815536 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2022-10-02 14:47:10 UTC
Created attachment 815539 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2022-10-02 14:47:11 UTC
Created attachment 815542 [details]
etc.portage.tar.bz2
Comment 5 Toralf Förster gentoo-dev 2022-10-02 14:47:12 UTC
Created attachment 815545 [details]
logs.tar.bz2
Comment 6 Toralf Förster gentoo-dev 2022-10-02 14:47:13 UTC
Created attachment 815548 [details]
sci-biology:stride-20011129-r1:20221002-134208.log
Comment 7 Larry the Git Cow gentoo-dev 2022-10-15 20:07:15 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e3f47e5d698809e572c10bda6e4929f2794f9860

commit e3f47e5d698809e572c10bda6e4929f2794f9860
Author:     Ionen Wolkens <ionen@gentoo.org>
AuthorDate: 2022-10-15 14:20:17 +0000
Commit:     Ionen Wolkens <ionen@gentoo.org>
CommitDate: 2022-10-15 20:06:44 +0000

    sci-biology/stride: fix build w/ upcoming clang16
    
    Note that the implicit int is part of the update patch.
    
    Closes: https://bugs.gentoo.org/874069
    Signed-off-by: Ionen Wolkens <ionen@gentoo.org>

 sci-biology/stride/files/stride-20011129-clang16.patch | 15 +++++++++++++++
 sci-biology/stride/stride-20011129-r1.ebuild           |  3 ++-
 2 files changed, 17 insertions(+), 1 deletion(-)