| Summary: | dev-python/numpy-1.21.1: test_nonzero_onedim fails with bus error | ||
|---|---|---|---|
| Product: | Gentoo Linux | Reporter: | Rolf Eike Beer <eike> |
| Component: | Current packages | Assignee: | Python Gentoo Team <python> |
| Status: | RESOLVED FIXED | ||
| Severity: | normal | CC: | mgorny, sam, sci |
| Priority: | Normal | Keywords: | TESTFAILURE |
| Version: | unspecified | ||
| Hardware: | All | ||
| OS: | Linux | ||
| See Also: | https://github.com/numpy/numpy/issues/19592 | ||
| Whiteboard: | |||
| Package list: | Runtime testing required: | --- | |
| Bug Depends on: | |||
| Bug Blocks: | 371525 | ||
| Attachments: | build.log | ||
Created attachment 729282 [details]
build.log
Is this a regression compared to 1.20.3-r1? Until now I only have see the Fortran tests failing. `Architecture: unsupported` doesn't bring much hope. The patch committed a few hours ago by upstream can be applied against 1.21.2 without problems and fixes the tests there for me. I'm on it. Please give me some time to do at least the minimal testing. The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=fb1e7ebd3b199eadab7869aca983bc5e8b3ead85 commit fb1e7ebd3b199eadab7869aca983bc5e8b3ead85 Author: Michał Górny <mgorny@gentoo.org> AuthorDate: 2021-10-24 20:50:38 +0000 Commit: Michał Górny <mgorny@gentoo.org> CommitDate: 2021-10-24 20:52:01 +0000 dev-python/numpy: Backport unaligned access fix Closes: https://bugs.gentoo.org/805974 Signed-off-by: Michał Górny <mgorny@gentoo.org> .../numpy/files/numpy-1.21.3-unaligned-array.patch | 45 ++++++++++++++++++++++ ...{numpy-1.21.1.ebuild => numpy-1.21.1-r1.ebuild} | 1 + ...{numpy-1.21.3.ebuild => numpy-1.21.2-r1.ebuild} | 1 + ...{numpy-1.21.2.ebuild => numpy-1.21.3-r1.ebuild} | 1 + 4 files changed, 48 insertions(+) |
Portage 3.0.20 (python 3.9.6-final-0, default/linux/sparc/17.0, gcc-10.3.0, glibc-2.33-r1, 5.13.0-gentoo-r1-sparc64 sparc64) ================================================================= System uname: Linux-5.13.0-gentoo-r1-sparc64-sparc64-sun4v-with-glibc2.33 KiB Mem: 33076584 total, 8559624 free KiB Swap: 0 total, 0 free Timestamp of repository gentoo: Sun, 01 Aug 2021 00:15:01 +0000 Head commit of repository gentoo: 6b04b1b76282e2ff00762239ad122467c5517e34 sh bash 5.1_p8 ld GNU ld (Gentoo 2.35.2 p1) 2.35.2 app-shells/bash: 5.1_p8::gentoo dev-lang/perl: 5.34.0::gentoo dev-lang/python: 2.7.18_p11::gentoo, 3.7.11::gentoo, 3.8.11::gentoo, 3.9.6::gentoo dev-util/cmake: 3.18.5::gentoo sys-apps/baselayout: 2.7::gentoo sys-apps/openrc: 0.42.1-r1::gentoo sys-apps/sandbox: 2.24::gentoo sys-devel/autoconf: 2.13-r1::gentoo, 2.69-r5::gentoo sys-devel/automake: 1.16.3-r1::gentoo sys-devel/binutils: 2.35.2::gentoo sys-devel/gcc: 10.3.0::gentoo sys-devel/gcc-config: 2.4::gentoo sys-devel/libtool: 2.4.6-r6::gentoo sys-devel/make: 4.3::gentoo sys-kernel/linux-headers: 5.10::gentoo (virtual/os-headers) sys-libs/glibc: 2.33-r1::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.de.gentoo.org/gentoo-portage/ priority: -1000 sync-rsync-verify-max-age: 24 sync-rsync-verify-jobs: 1 sync-rsync-verify-metamanifest: yes sync-rsync-extra-opts: qt location: /var/lib/layman/qt masters: gentoo priority: 50 ACCEPT_KEYWORDS="sparc" ACCEPT_LICENSE="* -@EULA" CBUILD="sparc-unknown-linux-gnu" CFLAGS="-O2 -mcpu=niagara2 -pipe -Wcast-align" CHOST="sparc-unknown-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt /var/qmail/alias /var/qmail/control" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-O2 -mcpu=niagara2 -pipe -Wcast-align" DISTDIR="/usr/portage/distfiles" ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" FCFLAGS="" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="" GENTOO_MIRRORS="ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://ftp.join.uni-muenster.de/pub/linux/distributions/gentoo" LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j20 -l40" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="acl big-endian bzip2 cli crypt dri fortran gdbm iconv ipv6 libglvnd libtirpc llvm-libunwind ncurses nls nptl openmp pam pcre readline sparc split-usr ssl tcpd unicode xattr zlib" ADA_TARGET="gnat_2018" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-3 php7-4" POSTGRES_TARGETS="postgres12 postgres13" PYTHON_SINGLE_TARGET="python3_9" PYTHON_TARGETS="python3_9" RUBY_TARGETS="ruby26" USERLAND="GNU" VIDEO_CARDS="fbdev glint mga r128 radeon dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RUSTFLAGS