| Summary: | sci-biology/cufflinks-2.2.1-r2 : biascorrection.h:18:39: fatal error: boost/.../unordered_map.hpp: No such file or directory | ||
|---|---|---|---|
| Product: | Gentoo Linux | Reporter: | Toralf Förster <toralf> |
| Component: | Current packages | Assignee: | Gentoo Science Biology related packages <sci-biology> |
| Status: | RESOLVED FIXED | ||
| Severity: | normal | ||
| Priority: | Normal | ||
| Version: | unspecified | ||
| Hardware: | All | ||
| OS: | Linux | ||
| Whiteboard: | |||
| Package list: | Runtime testing required: | --- | |
| Attachments: |
emerge-info.txt
emerge-history.txt environment etc.portage.tbz2 logs.tbz2 sci-biology:cufflinks-2.2.1-r2:20170911-054713.log temp.tbz2 |
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Created attachment 493912 [details]
emerge-info.txt
Created attachment 493914 [details]
emerge-history.txt
Created attachment 493916 [details]
environment
Created attachment 493918 [details]
etc.portage.tbz2
Created attachment 493920 [details]
logs.tbz2
Created attachment 493922 [details]
sci-biology:cufflinks-2.2.1-r2:20170911-054713.log
Created attachment 493924 [details]
temp.tbz2
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e8f6a4c4f1b147290aa62ef45d58084394ae56bd commit e8f6a4c4f1b147290aa62ef45d58084394ae56bd Author: David Seifert <soap@gentoo.org> AuthorDate: 2017-09-16 10:54:51 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2017-09-16 10:58:20 +0000 sci-biology/cufflinks: Fix boost TR1 header include * Also fix missing python dependencies Closes: https://bugs.gentoo.org/630654 Package-Manager: Portage-2.3.8, Repoman-2.3.3 sci-biology/cufflinks/cufflinks-2.2.1-r2.ebuild | 35 +++++++++++++++------- .../cufflinks-2.2.1-boost-1.65-tr1-removal.patch | 14 +++++++++ 2 files changed, 39 insertions(+), 10 deletions(-) |
from clustering.h:38, from clustering.cpp:10: biascorrection.h:18:39: fatal error: boost/tr1/unordered_map.hpp: No such file or directory #include <boost/tr1/unordered_map.hpp> ^ compilation terminated. ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 13.0-desktop_20170905-225247 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-6.4.0 * Available Python interpreters, in order of preference: [1] python3.4 [2] python3.6 (fallback) [3] python2.7 (fallback) [4] jython2.7 (fallback) Available Ruby profiles: [1] ruby22 (with Rubygems) * java-config: The following VMs are available for generation-2: *) IcedTea JDK 3.5.1 [icedtea-bin-8] Available Java Virtual Machines: [1] icedtea-bin-8 system-vm emerge -qpv sci-biology/cufflinks [ebuild N ] sci-biology/cufflinks-2.2.1-r2 USE="-debug"