Bug 327807

Summary:	<sci-chemistry/gromacs-4.0.7 fail to install with sys-apps/coreutils-8.4 + sys-devel/automake-1.11
Product:	Gentoo Linux	Reporter:	Markus Walter <gentoo>
Component:	Current packages	Assignee:	Gentoo Chemistry-Related Packages <sci-chemistry>
Status:	RESOLVED FIXED
Severity:	normal	CC:	junghans
Priority:	High
Version:	unspecified
Hardware:	All
OS:	Linux
Whiteboard:
Package list:		Runtime testing required:	---
Bug Depends on:
Bug Blocks:	319443, 326151
Attachments:	Patch to make install work again

Description Markus Walter 2010-07-11 14:52:02 UTC

Install will fail with the message 'install: will not overwrite just-created'.
Appended patch solves the problem.

Only the versions 4.0.4 and 4.0.5 are affected.

Comment 1 Markus Walter 2010-07-11 14:52:38 UTC

Created attachment 238325 [details, diff]
Patch to make install work again

Comment 2 Christoph Junghans (RETIRED) gentoo-dev

2010-07-11 17:23:14 UTC

This was fixed on 29 Oct 2009:
http://repo.or.cz/w/gromacs.git/commit/c93db8511af09c144fe4b2b8f57b14a5ad1e6cc7

However, better use gromacs-4.0.7, which is stable now and should lead to same results.

Comment 3 Jeroen Roovers (RETIRED) gentoo-dev

2010-07-12 23:40:25 UTC

(In reply to comment #2)
> This was fixed on 29 Oct 2009:
> http://repo.or.cz/w/gromacs.git/commit/c93db8511af09c144fe4b2b8f57b14a5ad1e6cc7
> 
> [...] gromacs-4.0.7, which is stable now [...]

Is /being/ stabilised now (bug #326151).

Comment 4 Samuli Suominen (RETIRED) gentoo-dev

2010-10-25 08:53:46 UTC

4.0.7-r4 is stabilized everywhere -> closing