| Summary: | Please stabilize sci-chemistry/gromacs-4.0.7-r4 | ||
|---|---|---|---|
| Product: | Gentoo Linux | Reporter: | Alexey Shvetsov <alexxy> |
| Component: | New packages | Assignee: | Alexey Shvetsov <alexxy> |
| Status: | RESOLVED FIXED | ||
| Severity: | normal | CC: | je_fro, junghans |
| Priority: | High | Keywords: | STABLEREQ |
| Version: | unspecified | ||
| Hardware: | All | ||
| OS: | Linux | ||
| URL: | http://www.gromacs.org | ||
| Whiteboard: | |||
| Package list: | Runtime testing required: | --- | |
| Bug Depends on: | 326331, 327807 | ||
| Bug Blocks: | |||
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Description
Alexey Shvetsov
2010-06-29 11:53:27 UTC
*** Bug 260995 has been marked as a duplicate of this bug. *** x86: Several issue, some of which I am still looking into. USE="-X -bash-completion -blas dmalloc doc -double-precision -ffamber fftw fkernels gsl -lapack -mpi -single-precision static -static-libs xml -zsh-completion" displays this. Is this expected? * QA Notice: The following files contain writable and executable sections * Files with such sections will not work properly (or at all!) on some * architectures/operating systems. A bug should be filed at * http://bugs.gentoo.org/ to make sure the issue is fixed. * For more information, see http://hardened.gentoo.org/gnu-stack.xml * Please include the following list of files in your report: * Note: Bugs should be filed for the respective maintainers * of the package in question and not hardened@g.o. * RWX --- --- usr/lib/libgmx.so.5.0.0 * RWX --- --- usr/lib/libgmx_mpi.so.5.0.0 Also, any attempt to build with USE="single-precision" or USE="double precision" fails at compile. I am going to do some more digging. When I have a better idea of what is going on I will either file a separate bug report or let you know how I did something wrong. (In reply to comment #2) > x86: Several issue, some of which I am still looking into. > > USE="-X -bash-completion -blas dmalloc doc -double-precision -ffamber fftw > fkernels gsl -lapack -mpi -single-precision static -static-libs xml > -zsh-completion" displays this. Is this expected? > > * QA Notice: The following files contain writable and executable sections > * Files with such sections will not work properly (or at all!) on some > * architectures/operating systems. A bug should be filed at > * http://bugs.gentoo.org/ to make sure the issue is fixed. > * For more information, see http://hardened.gentoo.org/gnu-stack.xml > * Please include the following list of files in your report: > * Note: Bugs should be filed for the respective maintainers > * of the package in question and not hardened@g.o. > * RWX --- --- usr/lib/libgmx.so.5.0.0 > * RWX --- --- usr/lib/libgmx_mpi.so.5.0.0 > > Also, any attempt to build with USE="single-precision" or USE="double > precision" fails at compile. I am going to do some more digging. When I have a > better idea of what is going on I will either file a separate bug report or let > you know how I did something wrong. > This was for 4.0.7-r3 by the way. See bug 326331 for a detailed list of different errors / warnings I've noticed. (I see no 3.3.3 version) We should also go with -r4 due bug 326331 amd64 stable stable x86, thanks Dane Stable on alpha. sparc stable |