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Bug 253546

Summary: sci-biology/bioperl-run-1.5.1: stabilization request
Product: Gentoo Linux Reporter: Martin Mokrejš <mmokrejs>
Component: New packagesAssignee: Olivier Fisette (RETIRED) <ribosome>
Status: RESOLVED WONTFIX    
Severity: normal CC: sci-biology
Priority: High    
Version: unspecified   
Hardware: All   
OS: Linux   
Whiteboard:
Package list:
Runtime testing required: ---
Bug Depends on: 270582    
Bug Blocks:    
Attachments: bioperl-run-1.5.1.ebuild.patch

Description Martin Mokrejš 2009-01-03 13:22:25 UTC
On stable x86 I am getting:

Total: 99 packages (82 upgrades, 1 downgrade, 14 new, 2 reinstalls), Size of downloads: 103,169 kB
Portage tree and overlays:
 [0] /usr/portage
 [?] indicates that the source repository could not be determined

!!! Multiple package instances within a single package slot have been pulled
!!! into the dependency graph, resulting in a slot conflict:

sci-biology/bioperl:0

  ('ebuild', '/', 'sci-biology/bioperl-1.4', 'merge') pulled in by
    sci-biology/bioperl required by world

  ('installed', '/', 'sci-biology/bioperl-1.5.1-r1', 'nomerge') pulled in by
    =sci-biology/bioperl-1.5* required by ('ebuild', '/', 'sci-biology/bioperl-run-1.5.1', 'merge')
    (and 1 more)
Comment 1 Martin Mokrejš 2009-01-03 13:24:01 UTC
Created attachment 177212 [details, diff]
bioperl-run-1.5.1.ebuild.patch
Comment 2 Andrey Kislyuk (RETIRED) gentoo-dev 2009-05-20 15:49:33 UTC
Will stabilize bioperl-run-1.6.1.