Go to:
Gentoo Home
Documentation
Forums
Lists
Bugs
Planet
Store
Wiki
Get Gentoo!
Gentoo's Bugzilla – Attachment 864949 Details for
Bug 909437
sci-libs/avogadrolibs-1.97.0 failed to emerge with USE=vtk - Targets not yet defined
Home
|
New
–
[Ex]
|
Browse
|
Search
|
Privacy Policy
|
[?]
|
Reports
|
Requests
|
Help
|
New Account
|
Log In
[x]
|
Forgot Password
Login:
[x]
build.log
build.log (text/plain), 7.71 KB, created by
Leonid Kopylov
on 2023-07-01 12:38:36 UTC
(
hide
)
Description:
build.log
Filename:
MIME Type:
Creator:
Leonid Kopylov
Created:
2023-07-01 12:38:36 UTC
Size:
7.71 KB
patch
obsolete
>[32m * [39;49;00mPackage: sci-libs/avogadrolibs-1.97.0:0 >[32m * [39;49;00mRepository: gentoo >[32m * [39;49;00mMaintainer: sci-chemistry@gentoo.org >[32m * [39;49;00mUSE: abi_x86_64 amd64 archive doc elibc_glibc hdf5 kernel_linux qt5 vtk >[32m * [39;49;00mFEATURES: ccache network-sandbox preserve-libs sandbox userpriv usersandbox >>>> Unpacking source... >>>> Unpacking avogadrolibs-1.97.0.tar.gz to /var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work >>>> Unpacking avogadrolibs-molecules-1.0.0.tar.gz to /var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work >>>> Unpacking avogadrolibs-crystals-1.0.1.tar.gz to /var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work >>>> Unpacking linux64-genXrdPattern-avogadrolibs-1.97.0 to /var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work >unpack linux64-genXrdPattern-avogadrolibs-1.97.0: file format not recognized. Ignoring. >>>> Source unpacked in /var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work >>>> Preparing source in /var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/avogadrolibs-1.97.0 ... > [32m*[0m Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/avogadrolibs-1.97.0" > [32m*[0m Build directory (BUILD_DIR): "/var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/avogadrolibs-1.97.0_build" > [32m*[0m Applying avogadrolibs-1.91.0_pre20180406-bundled-genxrdpattern.patch ... >[A[206C [34;01m[ [32;01mok[34;01m ][0m > [32m*[0m Applying avogadrolibs-1.95.1-tests.patch ... >patching file tests/core/CMakeLists.txt >Hunk #1 succeeded at 16 with fuzz 2 (offset 1 line). >[A[206C [34;01m[ [32;01mok[34;01m ][0m >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/avogadrolibs-1.97.0 ... > [32m*[0m Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/avogadrolibs-1.97.0" > [32m*[0m Build directory (BUILD_DIR): "/var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/avogadrolibs-1.97.0_build" >cmake -C /var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/avogadrolibs-1.97.0_build/gentoo_common_config.cmake -G Ninja -DCMAKE_INSTALL_PREFIX=/usr -DUSE_LIBARCHIVE=yes -DBUILD_DOCUMENTATION=yes -DUSE_HDF5=yes -DENABLE_TRANSLATIONS=yes -DUSE_OPENGL=yes -DUSE_QT=yes -DENABLE_TESTING=no -DUSE_VTK=yes -DUSE_PYTHON=OFF -DUSE_PROTOCALL=OFF -DUSE_MMTF=OFF -DUSE_LIBMSYM=OFF -DUSE_SPGLIB=OFF -DBUILD_GPL_PLUGINS=ON -DBUILD_STATIC_PLUGINS=ON -DOpenGL_GL_PREFERENCE=GLVND -DBUNDLED_GENXRDPATTERN=/var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/genXrdPattern -DCMAKE_BUILD_TYPE=RelWithDebInfo -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/avogadrolibs-1.97.0_build/gentoo_toolchain.cmake /var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/avogadrolibs-1.97.0 >loading initial cache file /var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/avogadrolibs-1.97.0_build/gentoo_common_config.cmake >-- The C compiler identification is GNU 13.1.1 >-- The CXX compiler identification is GNU 13.1.1 >-- Detecting C compiler ABI info >-- Detecting C compiler ABI info - done >-- Check for working C compiler: /usr/lib/ccache/bin/x86_64-pc-linux-gnu-gcc - skipped >-- Detecting C compile features >-- Detecting C compile features - done >-- Detecting CXX compiler ABI info >-- Detecting CXX compiler ABI info - done >-- Check for working CXX compiler: /usr/lib/ccache/bin/x86_64-pc-linux-gnu-g++ - skipped >-- Detecting CXX compile features >-- Detecting CXX compile features - done >-- Performing Test HAVE_GCC_ERROR_RETURN_TYPE >-- Performing Test HAVE_GCC_ERROR_RETURN_TYPE - Success >-- Found Git: /usr/bin/git (found version "2.41.0") >-- Could not use git to determine source version, using version 1.97.0 >-- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") >-- Performing Test CMAKE_HAVE_LIBC_PTHREAD >-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success >-- Found Threads: TRUE >-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY >-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success >-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY >-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success >-- Performing Test COMPILER_HAS_DEPRECATED_ATTR >-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success >-- Found HDF5: /usr/lib64/libhdf5.so;/usr/lib64/libpthread.a;/usr/lib64/libsz.so;/usr/lib64/libz.so;/usr/lib64/libdl.a;/usr/lib64/libm.so (found version "1.14.1") found components: C >-- Found OpenGL: /usr/lib64/libOpenGL.so >-- Found GLEW: /usr/include >-- Found PythonInterp: /usr/bin/python (found suitable version "3.11.4", minimum required is "3") >-- Found MPI_C: /usr/lib64/libmpi.so (found version "3.1") >-- Found MPI_CXX: /usr/lib64/libmpicxx.so (found version "3.1") >-- Found MPI: TRUE (found version "3.1") >-- Found MPI: TRUE (found version "3.1") found components: C >-- Found X11: /usr/include >-- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so >-- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so - found >-- Looking for gethostbyname >-- Looking for gethostbyname - found >-- Looking for connect >-- Looking for connect - found >-- Looking for remove >-- Looking for remove - found >-- Looking for shmat >-- Looking for shmat - found >-- Looking for IceConnectionNumber in ICE >-- Looking for IceConnectionNumber in ICE - found >-- Found GLEW: /usr/lib64/libGLEW.so >-- Found OpenGL: /usr/lib64/libOpenGL.so found components: OpenGL GLX >-- Found EXPAT: /usr/lib64/libexpat.so (found version "2.5.0") >-- Found LZMA: /usr/lib64/liblzma.so (found version "5.4.3") >-- Found LZ4: /usr/lib64/liblz4.so (found version "1.9.4") >-- Found double-conversion: /usr/lib64/libdouble-conversion.so >-- Found Eigen3: /usr/include/eigen3 (found suitable version "3.4.0", minimum required is "2.91.0") >-- Found TIFF: /usr/lib64/libtiff.so (found version "4.5.1") >-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.13") >-- Found PNG: /usr/lib64/libpng.so (found version "1.6.40") >-- Found JPEG: /usr/lib64/libjpeg.so (found version "62") >-- Found Freetype: /usr/lib64/libfreetype.so (found version "2.13.1") >CMake Error at /usr/lib64/cmake/TBB/TBBTargets.cmake:42 (message): > Some (but not all) targets in this export set were already defined. > > Targets Defined: TBB::tbb, TBB::tbbmalloc, TBB::tbbmalloc_proxy > > Targets not yet defined: TBB::tbbbind_2_5 > >Call Stack (most recent call first): > /usr/lib64/cmake/TBB/TBBConfig.cmake:1 (include) > /usr/lib64/cmake/vtk-9.2/FindTBB.cmake:87 (find_package) > /usr/lib64/cmake/vtk-9.2/VTK-vtk-module-find-packages.cmake:2754 (find_package) > /usr/lib64/cmake/vtk-9.2/vtk-config.cmake:152 (include) > avogadro/vtk/CMakeLists.txt:14 (find_package) > > >-- Configuring incomplete, errors occurred! > [31;01m*[0m ERROR: sci-libs/avogadrolibs-1.97.0::gentoo failed (configure phase): > [31;01m*[0m cmake failed > [31;01m*[0m > [31;01m*[0m Call stack: > [31;01m*[0m ebuild.sh, line 136: Called src_configure > [31;01m*[0m environment, line 2094: Called cmake_src_configure > [31;01m*[0m environment, line 1005: Called die > [31;01m*[0m The specific snippet of code: > [31;01m*[0m "${CMAKE_BINARY}" "${cmakeargs[@]}" "${CMAKE_USE_DIR}" || die "cmake failed"; > [31;01m*[0m > [31;01m*[0m If you need support, post the output of `emerge --info '=sci-libs/avogadrolibs-1.97.0::gentoo'`, > [31;01m*[0m the complete build log and the output of `emerge -pqv '=sci-libs/avogadrolibs-1.97.0::gentoo'`. > [31;01m*[0m The complete build log is located at '/var/tmp/portage/sci-libs/avogadrolibs-1.97.0/temp/build.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-libs/avogadrolibs-1.97.0/temp/environment'. > [31;01m*[0m Working directory: '/var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/avogadrolibs-1.97.0_build' > [31;01m*[0m S: '/var/tmp/portage/sci-libs/avogadrolibs-1.97.0/work/avogadrolibs-1.97.0'
You cannot view the attachment while viewing its details because your browser does not support IFRAMEs.
View the attachment on a separate page
.
View Attachment As Raw
Actions:
View
Attachments on
bug 909437
: 864949