dev-libs:igraph-0.9.4:20221110-195220.log

dev-libs:igraph-0.9.4:20221110-195220.log (text/plain), 12.12 KB, created by Toralf Förster on 2022-11-10 20:13:50 UTC

 * Package:    dev-libs/igraph-0.9.4:0/0
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU
 * FEATURES:   network-sandbox preserve-libs sandbox userpriv usersandbox

>>> Unpacking source...
>>> Unpacking igraph-0.9.4.tar.gz to /var/tmp/portage/dev-libs/igraph-0.9.4/work
>>> Source unpacked in /var/tmp/portage/dev-libs/igraph-0.9.4/work
>>> Preparing source in /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4 ...
 * Source directory (CMAKE_USE_DIR): "/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4"
 * Build directory  (BUILD_DIR):     "/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build"
 * Applying igraph-0.9.2-disable-broken-tests.patch ...
 [ ok ]
>>> Source prepared.
 * Clang 16 testing: this build is using a /etc/portage/bashrc hook!
>>> Configuring source in /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4 ...
 * Source directory (CMAKE_USE_DIR): "/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4"
 * Build directory  (BUILD_DIR):     "/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build"
cmake -C /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build/gentoo_common_config.cmake -G Ninja -DCMAKE_INSTALL_PREFIX=/usr -DUSE_CCACHE=OFF -DIGRAPH_GLPK_SUPPORT=ON -DIGRAPH_GRAPHML_SUPPORT=ON -DIGRAPH_USE_INTERNAL_ARPACK=OFF -DIGRAPH_USE_INTERNAL_BLAS=OFF -DIGRAPH_USE_INTERNAL_CXSPARSE=OFF -DIGRAPH_USE_INTERNAL_GLPK=OFF -DIGRAPH_USE_INTERNAL_GMP=OFF -DIGRAPH_USE_INTERNAL_LAPACK=OFF -DIGRAPH_ENABLE_TLS=no -DBUILD_TESTING=no -DCMAKE_BUILD_TYPE=Gentoo -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build/gentoo_toolchain.cmake /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4
loading initial cache file /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build/gentoo_common_config.cmake
-- Version number: 0.9.4
-- The C compiler identification is Clang 15.0.4
-- The CXX compiler identification is Clang 15.0.4
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /var/tmp/portage/dev-libs/igraph-0.9.4/temp/clang-wrappers/clang - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/lib/llvm/15/bin/clang++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Performing Test COMPILER_SUPPORTS_NO_VARARGS_FLAG
-- Performing Test COMPILER_SUPPORTS_NO_VARARGS_FLAG - Success
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Found OpenMP_C: -fopenmp=libomp (found version "5.0") 
-- Found OpenMP_CXX: -fopenmp=libomp (found version "5.0") 
-- Found OpenMP: TRUE (found version "5.0")  
-- Found CXSparse: /usr/include (found version "3.2.0") 
-- Found ARPACK: /usr/lib64/libarpack.so  
-- Found GMP: /usr/lib64/libgmp.so  
-- Found LibXml2: /usr/lib64/libxml2.so (found version "2.10.3") 
-- Found FLEX: /usr/bin/flex (found version "2.6.4") 
-- Found BISON: /usr/bin/bison (found version "3.8.2") 
-- Looking for expm1
-- Looking for expm1 - not found
-- Looking for fmin
-- Looking for fmin - not found
-- Looking for finite
-- Looking for finite - found
-- Looking for isfinite
-- Looking for isfinite - found
-- Looking for log2
-- Looking for log2 - not found
-- Looking for log1p
-- Looking for log1p - not found
-- Looking for rint
-- Looking for rint - not found
-- Looking for rintf
-- Looking for rintf - not found
-- Looking for round
-- Looking for round - not found
-- Looking for stpcpy
-- Looking for stpcpy - found
-- Looking for strcasecmp
-- Looking for strcasecmp - found
-- Looking for strdup
-- Looking for strdup - found
-- Looking for _stricmp
-- Looking for _stricmp - not found
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- Found Python3: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter 
--  
-- -----[ Build configuration ]----
-- Version:                   0.9.4
-- CMake build type:         Gentoo
-- Library type:             shared
-- Compiler cache:         disabled
--  
-- ----------[ Features ]----------
-- GLPK for optimization:       yes
-- Reading GraphML files:       yes
-- Thread-local storage:         no
-- Link-time optimization:       no
--  
-- --------[ Dependencies ]--------
-- ARPACK:                      yes
-- BISON:                       yes
-- BLAS:                        yes
-- CXSparse:                    yes
-- FLEX:                        yes
-- GLPK:                        yes
-- GMP:                         yes
-- LAPACK:                      yes
-- LibXml2:                     yes
-- OpenMP:                      yes
--  
-- -----------[ Testing ]----------
-- Diff tool:             not found
-- Sanitizers:                 none
-- Code coverage:                no
-- Verify 'finally' stack:       no
--  
-- --------[ Documentation ]-------
-- HTML:                         no
-- PDF:                          no
--  
-- igraph configured successfully.
--  
-- <<< Gentoo configuration >>>
Build type      Gentoo
Install path    /usr
Compiler flags:
C               -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int
C++             -pipe -march=native -fno-diagnostics-color -O2
Linker flags:
Executable      -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0
Module          -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0
Shared          -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0

-- Configuring done
-- Generating done
-- Build files have been written to: /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build
>>> Source configured.
'/var/tmp/portage/dev-libs/igraph-0.9.4/temp/clang16-errors.log' -> '/var/tmp/clang/dev-libs/igraph-0.9.4/clang16-errors.log'
'/var/tmp/portage/dev-libs/igraph-0.9.4/temp/clang16-safe.log' -> '/var/tmp/clang/dev-libs/igraph-0.9.4/clang16-safe.log'
>>> Compiling source in /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4 ...
 * Source directory (CMAKE_USE_DIR): "/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4"
 * Build directory  (BUILD_DIR):     "/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build"
ninja -v -j4 -l0
[1/266] /var/tmp/portage/dev-libs/igraph-0.9.4/temp/clang-wrappers/clang -DIGRAPH_STATIC -I/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/include -I/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build/include  -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -fPIC -fvisibility=hidden -fno-color-diagnostics -Werror -Wall -Wextra -pedantic -Wno-unused-function -Wno-unused-parameter -Wno-sign-compare -Wno-varargs -fopenmp=libomp -std=gnu99 -MD -MT vendor/plfit/CMakeFiles/plfit.dir/gss.c.o -MF vendor/plfit/CMakeFiles/plfit.dir/gss.c.o.d -o vendor/plfit/CMakeFiles/plfit.dir/gss.c.o -c /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/vendor/plfit/gss.c
FAILED: vendor/plfit/CMakeFiles/plfit.dir/gss.c.o 
/var/tmp/portage/dev-libs/igraph-0.9.4/temp/clang-wrappers/clang -DIGRAPH_STATIC -I/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/include -I/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build/include  -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -fPIC -fvisibility=hidden -fno-color-diagnostics -Werror -Wall -Wextra -pedantic -Wno-unused-function -Wno-unused-parameter -Wno-sign-compare -Wno-varargs -fopenmp=libomp -std=gnu99 -MD -MT vendor/plfit/CMakeFiles/plfit.dir/gss.c.o -MF vendor/plfit/CMakeFiles/plfit.dir/gss.c.o.d -o vendor/plfit/CMakeFiles/plfit.dir/gss.c.o -c /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/vendor/plfit/gss.c
In file included from /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/vendor/plfit/gss.c:24:
/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/vendor/plfit/gss.h:132:40: error: a function declaration without a prototype is deprecated in all versions of C [-Werror,-Wstrict-prototypes]
unsigned short int gss_get_warning_flag();
                                       ^
                                        void
/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/vendor/plfit/gss.c:60:40: error: a function declaration without a prototype is deprecated in all versions of C [-Werror,-Wstrict-prototypes]
unsigned short int gss_get_warning_flag() {
                                       ^
                                        void
2 errors generated.
[2/266] /var/tmp/portage/dev-libs/igraph-0.9.4/temp/clang-wrappers/clang -DIGRAPH_STATIC -I/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/include -I/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build/include  -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -fPIC -fvisibility=hidden -fno-color-diagnostics -Werror -Wall -Wextra -pedantic -Wno-unused-function -Wno-unused-parameter -Wno-sign-compare -Wno-varargs -fopenmp=libomp -std=gnu99 -MD -MT vendor/plfit/CMakeFiles/plfit.dir/kolmogorov.c.o -MF vendor/plfit/CMakeFiles/plfit.dir/kolmogorov.c.o.d -o vendor/plfit/CMakeFiles/plfit.dir/kolmogorov.c.o -c /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/vendor/plfit/kolmogorov.c
[3/266] /var/tmp/portage/dev-libs/igraph-0.9.4/temp/clang-wrappers/clang -DIGRAPH_STATIC -I/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/include -I/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build/include  -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -fPIC -fvisibility=hidden -fno-color-diagnostics -Werror -Wall -Wextra -pedantic -Wno-unused-function -Wno-unused-parameter -Wno-sign-compare -Wno-varargs -fopenmp=libomp -std=gnu99 -MD -MT vendor/plfit/CMakeFiles/plfit.dir/hzeta.c.o -MF vendor/plfit/CMakeFiles/plfit.dir/hzeta.c.o.d -o vendor/plfit/CMakeFiles/plfit.dir/hzeta.c.o -c /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/vendor/plfit/hzeta.c
[4/266] /var/tmp/portage/dev-libs/igraph-0.9.4/temp/clang-wrappers/clang -DIGRAPH_STATIC -I/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/include -I/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build/include  -pipe -march=native -fno-diagnostics-color -O2 -Werror=implicit-function-declaration -Werror=implicit-int -fPIC -fvisibility=hidden -fno-color-diagnostics -Werror -Wall -Wextra -pedantic -Wno-unused-function -Wno-unused-parameter -Wno-sign-compare -Wno-varargs -fopenmp=libomp -std=gnu99 -MD -MT vendor/plfit/CMakeFiles/plfit.dir/lbfgs.c.o -MF vendor/plfit/CMakeFiles/plfit.dir/lbfgs.c.o.d -o vendor/plfit/CMakeFiles/plfit.dir/lbfgs.c.o -c /var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4/vendor/plfit/lbfgs.c
ninja: build stopped: subcommand failed.
 * ERROR: dev-libs/igraph-0.9.4::gentoo failed (compile phase):
 *   ninja -v -j4 -l0 failed
 * 
 * Call stack:
 *     ebuild.sh, line  122:  Called src_compile
 *   environment, line 2362:  Called cmake_src_compile
 *   environment, line  980:  Called cmake_build
 *   environment, line  949:  Called eninja
 *   environment, line 1411:  Called die
 * The specific snippet of code:
 *       "$@" || die "${nonfatal_args[@]}" "${*} failed"
 * 
 * If you need support, post the output of `emerge --info '=dev-libs/igraph-0.9.4::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-libs/igraph-0.9.4::gentoo'`.
 * The complete build log is located at '/var/log/portage/dev-libs:igraph-0.9.4:20221110-195220.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/dev-libs/igraph-0.9.4/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-libs/igraph-0.9.4/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4_build'
 * S: '/var/tmp/portage/dev-libs/igraph-0.9.4/work/igraph-0.9.4'