gasnet-1.30.0:20210614-223248.log

gasnet-1.30.0:20210614-223248.log (text/plain), 39.07 KB, created by Alessandro Barbieri on 2021-06-14 22:39:13 UTC

 * Package:    sys-cluster/gasnet-1.30.0
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 elibc_glibc kernel_linux mpi threads userland_GNU
 * FEATURES:   fakeroot network-sandbox preserve-libs sandbox splitdebug userpriv usersandbox
Auto packing the repository in background for optimum performance.
See "git help gc" for manual housekeeping.
[master 082d52a8] saving uncommitted changes in /etc prior to emerge run
 Author: Alessandro-Barbieri <[e-mail]>
 2 files changed, 13 insertions(+), 8 deletions(-)
 create mode 120000 systemd/system/cron-weekly-mdadm.timer
 * /etc/portage/package.cflags/cflags -> */*: NOFFLAGS=1
 * /etc/portage/package.cflags/cflags -> */*: LDFLAGS-="-Wl,-z,now -Wl,-z,relro"
 * /etc/portage/package.cflags/cflags -> */*: USE_NONGNU="" +fPIE +fstack-protector-all +D_FORTIFY_SOURCE=2 
 * /etc/portage/package.cflags/cflags -> */*: NOLDADD=1
 * FEATURES='assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg candy cgroup clean-logs config-protect-if-modified distlocks ebuild-locks fakeroot fixlafiles ipc-sandbox merge-sync metadata-transfer mount-sandbox multilib-strict network-sandbox news parallel-fetch parallel-install pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign split-elog split-log splitdebug strict strict-keepdir unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr'
 * CFLAGS='-Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration'
 * CXXFLAGS='-Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection'
 * CPPFLAGS='-D_GLIBCXX_ASSERTIONS'
 * FFLAGS='-Os -pipe -march=native -fdiagnostics-color=always'
 * FCFLAGS='-Os -pipe -march=native -fdiagnostics-color=always'
 * F77FLAGS='-Os -pipe -march=native -fdiagnostics-color=always'
 * LDFLAGS='-Wl,-O1 -Wl,--as-needed -Wl,--sort-common'
 * MAKEOPTS='-j12 -l15'
 * gcc (Gentoo Hardened 10.3.0 p1) 10.3.0
 * g++ (Gentoo Hardened 10.3.0 p1) 10.3.0
 * LLD 12.0.0 (compatible with GNU linkers)
 * Linux ALESSAND-F1E8 5.10.4-rt-rt22-x86_64 #3 SMP PREEMPT_RT Sun Apr 18 16:12:36 CEST 2021 x86_64 AMD Ryzen 5 3600 6-Core Processor AuthenticAMD GNU/Linux
0;emerge 00:32:52 1|2 gasnet (root@ALESSAND-F1E8)

>>> Unpacking source...
>>> Unpacking GASNet-1.30.0.tar.gz to /var/tmp/portage/sys-cluster/gasnet-1.30.0/work
>>> Source unpacked in /var/tmp/portage/sys-cluster/gasnet-1.30.0/work
>>> Preparing source in /var/tmp/portage/sys-cluster/gasnet-1.30.0/work/GASNet-1.30.0 ...
 * Running eautoreconf in '/var/tmp/portage/sys-cluster/gasnet-1.30.0/work/GASNet-1.30.0' ...
 * Running 'aclocal -I other/plpa/config' ...
 [ ok ]
 * This package has a configure.in file which has long been deprecated.  Please
 * update it to use configure.ac instead as newer versions of autotools will die
 * when it finds this file.  See https://bugs.gentoo.org/426262 for details.
 * Running 'autoconf --force' ...
 [ ok ]
 * Running 'autoheader' ...
 [ ok ]
 * Running 'automake --add-missing --copy --foreign --force-missing' ...
 [ ok ]
 * Running elibtoolize in: GASNet-1.30.0/
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sys-cluster/gasnet-1.30.0/work/GASNet-1.30.0 ...
 * econf: updating GASNet-1.30.0/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating GASNet-1.30.0/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating GASNet-1.30.0/config-aux/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating GASNet-1.30.0/config-aux/config.guess with /usr/share/gnuconfig/config.guess
./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --docdir=/usr/share/doc/gasnet-1.30.0 --libdir=/usr/lib64 --disable-ibv --enable-mpi --enable-pthreads CC=x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC MPI_CC=mpicc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC CXX=x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -fPIC
checking for good shell... yes
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking target system type... x86_64-pc-linux-gnu
checking for a BSD-compatible install... /usr/lib/portage/pypy3/ebuild-helpers/xattr/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether /usr/bin/remake sets $(MAKE)... yes
checking whether /usr/bin/remake supports nested variables... yes
checking for package version...  GASNet 1.30.0 http://gasnet.lbl.gov
checking for configure arguments... 
configure args: '--prefix=/usr' '--build=x86_64-pc-linux-gnu' '--host=x86_64-pc-linux-gnu' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--datadir=/usr/share' '--sysconfdir=/etc' '--localstatedir=/var/lib' '--docdir=/usr/share/doc/gasnet-1.30.0' '--libdir=/usr/lib64' '--disable-ibv' '--enable-mpi' '--enable-pthreads' 'CC=x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC' 'MPI_CC=mpicc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC' 'CXX=x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -fPIC'
checking if user enabled cross-compile... no
checking for cached autoconf environment settings... 
checking for CC setting...                 (provided) "x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC"
checking for CFLAGS setting...             (provided) "-Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration"
checking for CPP setting...                (not set)
checking for CPPFLAGS setting...           (provided) "-D_GLIBCXX_ASSERTIONS"
checking for LDFLAGS setting...            (provided) "-Wl,-O1 -Wl,--as-needed -Wl,--sort-common"
checking for LIBS setting...               (not set)
checking for PERL setting...               (not set)
checking for CXX setting...                (provided) "x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -fPIC"
checking for CXXCPP setting...             (not set)
checking for CXXFLAGS setting...           (provided) "-Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection"
checking for pwd... /bin/pwd
checking autoconf version... 2.69
configure: WARNING: configure cache_file setting got lost - you may need to run a fresh ./Bootstrap
TOP_SRCDIR:     /var/tmp/portage/sys-cluster/gasnet-1.30.0/work/GASNet-1.30.0
TOP_BUILDDIR:   /var/tmp/portage/sys-cluster/gasnet-1.30.0/work/GASNet-1.30.0
system info:      localhost x86_64-pc-linux-gnu
build id:       Tue Jun 15 00:33:17 CEST 2021 portage
checking for gawk... (cached) gawk
checking for gmake... /usr/bin/gmake
checking for GNU make... GNU Make 4.3
License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>
yes
checking for perl5... no
checking for perl... /usr/bin/perl
checking for perl version 5.005 or later... yes
checking whether /usr/bin/remake supports the include directive... yes (GNU style)
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC option to accept ISO C89... none needed
checking whether x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC understands -c and -o together... yes
checking dependency style of x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC... none
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC -E
checking for x86_64-pc-linux-gnu-gcc... (cached) x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC
checking whether we are using the GNU C compiler... (cached) yes
checking whether x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC accepts -g... (cached) yes
checking for x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC option to accept ISO C89... (cached) none needed
checking whether x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC understands -c and -o together... (cached) yes
checking dependency style of x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC... (cached) none
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC -E
checking for x86_64-pc-linux-gnu-gcc... /usr/bin/x86_64-pc-linux-gnu-gcc
checking for full path expansion of CPP... /usr/bin/x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC -E
checking for working C preprocessor... yes
checking for x86_64-pc-linux-gnu-gcc... /usr/bin/x86_64-pc-linux-gnu-gcc
checking for full path expansion of CC... /usr/bin/x86_64-pc-linux-gnu-gcc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC
checking for working C compiler... yes
checking working C compiler executables... yes
checking whether ln -s works... yes
checking whether byte ordering is bigendian ... 0
checking for mpcc_r... no
checking for C compiler family... GNU
checking for gcc version string... 10.3.0
checking for known buggy compilers... ok
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking size of void *... 8
checking for C compiler flag --param max-inline-insns-single=35000... yes
checking for C compiler flag --param max-inline-insns=100000... no/error: x86_64-pc-linux-gnu-gcc: error: unrecognized command-line option '--param=max-inline-insns=100000'; did you mean '--param=max-inline-insns-auto='?
checking for C compiler flag --param inline-unit-growth=10000... yes
checking for C compiler flag --param large-function-growth=200000... yes
checking for C compiler flag -Winline... yes
checking for buggy -Winline... ok
checking for C compiler flag -Wno-unused... yes
checking for C compiler flag -Wunused... yes
checking for C compiler flag -Wno-unused-parameter... yes
checking for C compiler flag -Wunused-parameter... yes
checking for C compiler flag -Wno-address... yes
checking for C compiler flag -Waddress... yes
checking for buggy pthread.h mutex initializers... ok
checking for C compiler flag ... yes
checking for flags required for C99 subset compliance... none required
checking for working GASNet-required ISO C99 subset... yes
checking for libgcc link flags... -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.3.0 -lgcc
checking for __restrict__ keyword... yes
checking for restrict qualifying typedefs... yes
checking C compiler for 32-bit __sync atomics support... yes
checking C compiler for 64-bit __sync atomics support... yes
checking C compiler for inline modifier... yes
checking C compiler for working 'static inline'... yes
checking for __attribute__((__always_inline__))... yes
checking for __attribute__((__noinline__))... yes
checking for __attribute__((__malloc__))... yes
checking for __attribute__((__warn_unused_result__))... yes
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checking for __attribute__((__pure__))... yes
checking for __attribute__((__hot__))... yes
checking for __attribute__((__cold__))... yes
checking for __attribute__((__deprecated__))... yes
checking for __attribute__((__format__))... yes
checking for __attribute__((__format__)) on function pointers... yes
checking for __attribute__((__format__)) on function pointers as arguments... yes
checking for __attribute__((__unused__)) on typedefs... yes
checking for pragma GCC diagnostic push/pop/ignored... yes
checking for PLATFORM_COMPILER_IDSTR... |COMPILER_FAMILY:GNU|COMPILER_VERSION:10.3.0|COMPILER_FAMILYID:1|STD:__STDC__,__STDC_VERSION__=201710L|misc:10.3.0|
checking for PLATFORM_COMPILER_FAMILYID... 1
checking for PLATFORM_COMPILER_ID... 1
checking for PLATFORM_COMPILER_VERSION... 656128
checking size of char... 1
checking size of short... 2
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of void *... (cached) 8
checking stdint.h usability... yes
checking stdint.h presence... yes
checking for stdint.h... yes
checking for a complete stdint.h... yes
checking inttypes.h usability... yes
checking inttypes.h presence... yes
checking for inttypes.h... yes
checking for a complete inttypes.h... yes
checking sys/types.h usability... yes
checking sys/types.h presence... yes
checking for sys/types.h... yes
checking for a complete sys/types.h... no
checking size of float... 4
checking size of double... 8
checking for type _Bool... yes
checking size of _Bool... 1
checking for type long double... yes
checking size of long double... 16
checking for type float _Complex... yes
checking size of float _Complex... 8
checking PAGESIZE... no
checking PAGE_SIZE... no
checking sysconf(_SC_PAGESIZE)... 4096
checking for sin in -lm... yes
checking for Linux flavor... generic
checking for working pthreads support... yes
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking for library containing pthread_setconcurrency... none required
checking for library containing pthread_kill... none required
checking for library containing pthread_kill_other_threads_np... no
checking for library containing pthread_rwlock_tryrdlock... none required
checking for library containing pthread_rwlock_wrlock... none required
checking whether the GCC __thread extension is supported.... yes
checking for shared data cache line size... 64
checking for thr_create in -lthread... no
checking hugetlbfs.h usability... no
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checking for library containing shm_open... -lrt
checking for working shm_open()... yes
checking for ia64 cmp8xchg16 support... no
checking for x86-64 cmpxchg16b support... yes
checking for x86 EBX register... no
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checking for __builtin_ctz... yes
checking for PR_SET_PDEATHSIG... yes
checking for fork... yes
checking for popen... yes
checking for system... yes
checking /boot/kernel.h usability... no
checking /boot/kernel.h presence... no
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checking whether to force a uni-processor build... no
checking for clock_gettime()... yes
checking for library containing clock_gettime... none required
checking for non-native atomics... no
checking whether we are using the GNU C++ compiler... yes
checking whether x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -fPIC accepts -g... yes
checking dependency style of x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -fPIC... none
checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -fPIC -E
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -fPIC accepts -g... (cached) yes
checking dependency style of x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -fPIC... (cached) none
checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -fPIC -E
checking for x86_64-pc-linux-gnu-g++... /usr/bin/x86_64-pc-linux-gnu-g++
checking for full path expansion of CXXCPP... /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -fPIC -E
checking for working C++ preprocessor... yes
checking for x86_64-pc-linux-gnu-g++... /usr/bin/x86_64-pc-linux-gnu-g++
checking for full path expansion of CXX... /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -fPIC
checking for working C++ compiler... yes
checking working C++ compiler executables... yes
checking C++ compiler for PLATFORM_COMPILER_IDSTR... |COMPILER_FAMILY:GNU|COMPILER_VERSION:10.3.0|COMPILER_FAMILYID:1|STD:__STDC__,__cplusplus=201402L|misc:10.3.0|
checking C++ compiler for PLATFORM_COMPILER_FAMILYID... 1
checking C++ compiler for PLATFORM_COMPILER_ID... 10001
checking C++ compiler for PLATFORM_COMPILER_VERSION... 656128
checking for C++ compiler family... GNU
checking for gcc version string... (cached) 10.3.0
checking for known buggy compilers... ok
checking for C++ compiler flag -Wno-unused... yes
checking for C++ compiler flag -Wunused... yes
checking for C++ compiler flag -Wno-unused-parameter... yes
checking for C++ compiler flag -Wunused-parameter... yes
checking for C++ compiler flag -Wno-address... yes
checking for C++ compiler flag -Waddress... yes
checking for buggy pthread.h mutex initializers... ok
checking for cxxLIBS setting...            (default)  ""
checking for cxxLDFLAGS setting...         (default)  ""
checking for working C++ exceptions... yes
checking C++ compiler for __restrict__ keyword... yes
checking C++ compiler for restrict qualifying typedefs... yes
checking C++ compiler for 32-bit __sync atomics support... yes
checking C++ compiler for 64-bit __sync atomics support... yes
checking C++ compiler for __attribute__((__always_inline__))... yes
checking C++ compiler for __attribute__((__noinline__))... yes
checking C++ compiler for __attribute__((__malloc__))... yes
checking C++ compiler for __attribute__((__warn_unused_result__))... yes
checking C++ compiler for __attribute__((__used__))... yes
checking C++ compiler for __attribute__((__unused__))... yes
checking C++ compiler for __attribute__((__may_alias__))... yes
checking C++ compiler for __attribute__((__noreturn__))... yes
checking C++ compiler for __attribute__((__const__))... yes
checking C++ compiler for __attribute__((__pure__))... yes
checking C++ compiler for __attribute__((__hot__))... yes
checking C++ compiler for __attribute__((__cold__))... yes
checking C++ compiler for __attribute__((__deprecated__))... yes
checking C++ compiler for __attribute__((__format__))... yes
checking C++ compiler for __attribute__((__format__)) on function pointers... yes
checking C++ compiler for __attribute__((__format__)) on function pointers as arguments... yes
checking C++ compiler for __attribute__((__unused__)) on typedefs... yes
checking C++ compiler for pragma GCC diagnostic push/pop/ignored... yes
checking for __VA_ARGS__ support in C++... yes
checking building C++ helper object... ok
checking for working C++ to C linkage... yes
checking for library containing socket... none required
checking for library containing gethostbyname... none required
checking ifaddrs.h usability... yes
checking ifaddrs.h presence... yes
checking for ifaddrs.h... yes
checking for getifaddrs... yes
checking for working UDP configuration... yes
checking for GASNET_CSPAWN_CMD setting...  (default)  ""
checking for MPI_CC setting...             (provided) "mpicc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC"
checking for MPI_LIBS setting...           (default)  ""
checking for MPIRUN_CMD setting...         (default)  "mpirun -np %N %C"
checking for mpicc... /usr/bin/mpicc
checking for full path expansion of MPI_CC... /usr/bin/mpicc -Os -pipe -march=native -fdiagnostics-color=always -fexceptions -Wformat -fstack-clash-protection -Wimplicit-function-declaration -Wno-error=implicit-function-declaration -fPIC
checking MPI compiler for PLATFORM_COMPILER_IDSTR... |COMPILER_FAMILY:GNU|COMPILER_VERSION:10.3.0|COMPILER_FAMILYID:1|STD:__STDC__,__STDC_VERSION__=201710L|misc:10.3.0|
checking MPI compiler for PLATFORM_COMPILER_FAMILYID... 1
checking MPI compiler for PLATFORM_COMPILER_ID... 1
checking MPI compiler for PLATFORM_COMPILER_VERSION... 656128
checking for MPI compiler family... GNU
checking for gcc version string... (cached) 10.3.0
checking for C compiler flag -Wno-unused... yes
checking for C compiler flag -Wunused... yes
checking for C compiler flag -Wno-unused-parameter... yes
checking for C compiler flag -Wunused-parameter... yes
checking for C compiler flag -Wno-address... yes
checking for C compiler flag -Waddress... yes
checking for buggy pthread.h mutex initializers... ok
checking for C compiler flag ... yes
checking for flags required for C99 subset compliance... none required
checking for MPI_CFLAGS setting...         (default)  "-O3 --param max-inline-insns-single=35000 --param inline-unit-growth=10000 --param large-function-growth=200000 -Winline"
checking for C compiler flag -O3 --param max-inline-insns-single=35000 --param inline-unit-growth=10000 --param large-function-growth=200000 -Winline... yes
checking for mpirun... /usr/bin/mpirun
checking for full path expansion of MPIRUN_CMD... /usr/bin/mpirun -np %N %C
checking building MPI helper object... ok
checking for working MPI configuration... yes
checking MPI_CC for __restrict__ keyword... yes
checking MPI_CC for restrict qualifying typedefs... yes
checking MPI_CC for 32-bit __sync atomics support... yes
checking MPI_CC for 64-bit __sync atomics support... yes
checking MPI_CC for inline modifier... yes
checking MPI_CC for working 'static inline'... yes
checking MPI_CC for __attribute__((__always_inline__))... no/warning
checking MPI_CC for __attribute__((__noinline__))... yes
checking MPI_CC for __attribute__((__malloc__))... yes
checking MPI_CC for __attribute__((__warn_unused_result__))... yes
checking MPI_CC for __attribute__((__used__))... yes
checking MPI_CC for __attribute__((__unused__))... yes
checking MPI_CC for __attribute__((__may_alias__))... yes
checking MPI_CC for __attribute__((__noreturn__))... yes
checking MPI_CC for __attribute__((__const__))... yes
checking MPI_CC for __attribute__((__pure__))... yes
checking MPI_CC for __attribute__((__hot__))... yes
checking MPI_CC for __attribute__((__cold__))... yes
checking MPI_CC for __attribute__((__deprecated__))... yes
checking MPI_CC for __attribute__((__format__))... yes
checking MPI_CC for __attribute__((__format__)) on function pointers... yes
checking MPI_CC for __attribute__((__format__)) on function pointers as arguments... yes
checking MPI_CC for __attribute__((__unused__)) on typedefs... yes
checking MPI_CC for pragma GCC diagnostic push/pop/ignored... yes
checking MPI_CC for value of MPI_VERSION... 3
checking for working GASNet-required ISO C99 subset in MPI_CC... yes
checking for MPI_Init_thread... yes
checking for MPI_Query_thread... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for socketpair() support... yes
checking for O_ASYNC support... yes
checking for mxm_dump_config... no
checking for MXM_HOME setting...           (default)  "/usr"
checking if /usr is the MXM drivers install prefix... probably not - missing include/mxm/api/mxm_api.h
checking for MXM_CFLAGS setting...         (default)  ""
checking for MXM_LIBS setting...           (default)  "-lmxm"
checking for MXM_LDFLAGS setting...        (default)  ""
checking for working MXM configuration... no
checking for PSM_HOME setting...           (default)  "/usr"
checking if /usr is the Omni-Path PSM2 drivers install prefix... probably not - missing include/psm2.h
checking for PSM_CFLAGS setting...         (default)  ""
checking for PSM_LIBS setting...           (default)  "-lpsm2"
checking for PSM_LDFLAGS setting...        (default)  ""
checking for working PSM configuration... no
checking for yod... no
checking for PORTALS4_HOME setting...      (default)  "/usr"
checking if /usr is the Portals4 library install prefix... probably not - missing include/portals4.h
checking for PORTALS4_CFLAGS setting...    (default)  ""
checking for PORTALS4_LIBS setting...      (default)  "-lportals"
checking for PORTALS4_LDFLAGS setting...   (default)  ""
checking for working Portals4 configuration... no
checking for PMI support in Portals4 runtime library... no
checking for SHMEM network type... unknown
checking for PAMI_HOME setting...          (default)  "/usr"
checking for PAMI_CFLAGS setting...        (default)  ""
checking for PAMI_LDFLAGS setting...       (default)  ""
checking for PAMI_LIBS setting...          (default)  "-lpami"
checking for working PAMI configuration... no
checking for fi_info... /usr/bin/fi_info
checking for OFI_HOME setting...           (default)  "/usr"
checking if /usr is the OFI libfabric install prefix... yes
checking for OFI_CFLAGS setting...         (default)  ""
checking for OFI_LIBS setting...           (default)  "-lfabric"
checking for OFI_LDFLAGS setting...        (default)  ""
checking for working OFI GASNet bindings... yes
 * ACCESS DENIED:  open_wr:      /dev/kfd
 * ACCESS DENIED:  open_wr:      /dev/kfd
 * ACCESS DENIED:  open_wr:      /dev/kfd
configure: WARNING:
The sockets OFI provider was detected on your system and the ofi-conduit has been
configured for that provider. If that is not your desired provider, override this by using the
--with-ofi-provider=<provider name> configure flag. See the ofi-conduit README for details.
checking for sys/socket.h... (cached) yes
checking sys/sockio.h usability... no
checking sys/sockio.h presence... no
checking for sys/sockio.h... no
checking sys/uio.h usability... yes
checking sys/uio.h presence... yes
checking for sys/uio.h... yes
checking netinet/tcp.h usability... yes
checking netinet/tcp.h presence... yes
checking for netinet/tcp.h... yes
checking for socklen_t or its equivalent... socklen_t
checking for setpgid... yes
checking for setpgrp... yes
checking whether setpgrp takes no argument... yes
checking for PMI_HOME setting...           (default)  "/usr"
checking for PMI_LDFLAGS setting...        (default)  ""
checking for PMI_LIBS setting...           (default)  "probe"
checking for library containing PMI2_Init... no
checking for library containing PMI_Init... no
checking for PMI spawner support... no
checking for size_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking for on_exit... yes
checking for gethostid... yes
checking for setenv... yes
checking for unsetenv... yes
checking for putenv... yes
checking for getrlimit... yes
checking for setrlimit... yes
checking for getrlimit64... yes
checking for setrlimit64... yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/table.h usability... no
checking sys/table.h presence... no
checking for sys/table.h... no
checking features.h usability... yes
checking features.h presence... yes
checking for features.h... yes
checking for fopen64... yes
checking for sigprocmask... yes
checking sn/mmtimer.h usability... no
checking sn/mmtimer.h presence... no
checking for sn/mmtimer.h... no
checking linux/mmtimer.h usability... yes
checking linux/mmtimer.h presence... yes
checking for linux/mmtimer.h... yes
checking for srand_deterministic... no
checking for declaration/definition of setenv... yes
checking for declaration/definition of unsetenv... yes
checking for declaration/definition of snprintf... yes
checking for declaration/definition of vsnprintf... yes
checking for isblank... yes
checking for isascii... yes
checking for toascii... yes
checking for declaration/definition of isblank... yes
checking for declaration/definition of isascii... yes
checking for declaration/definition of toascii... yes
checking for buggy ctype.h... ok
checking execinfo.h usability... yes
checking execinfo.h presence... yes
checking for execinfo.h... yes
checking for backtrace... yes
checking for backtrace_symbols... yes
checking for addr2line... /usr/bin/addr2line
checking for gdb... /usr/bin/gdb
checking for gstack... no
checking for pstack... no
checking for pgdbg... no
checking for idb... no
checking for idb-e... no
checking for ladebug... no
checking for dbx... no
checking for lldb... /usr/bin/lldb
checking ucontext.h usability... yes
checking ucontext.h presence... yes
checking for ucontext.h... yes
checking for printstack... no
checking for usleep()... yes
checking for library containing usleep... none required
checking for nanosleep()... yes
checking for library containing nanosleep... none required
checking for clock_nanosleep()... yes
checking for library containing clock_nanosleep... none required
checking for nsleep()... yes
checking for library containing nsleep... no
entry point not found - disabled
checking for sched_yield()... yes
checking for library containing sched_yield... none required
checking for syscall... yes
checking syscall.h usability... yes
checking syscall.h presence... yes
checking for syscall.h... yes
checking for unistd.h... (cached) yes
checking for __NR_sched_setaffinity... yes
checking for __NR_sched_getaffinity... yes
checking for PLPA building mode... standalone
checking for PLPA symbol prefix... gasneti_plpa_
checking whether to use PLPA for cpu binding... yes
checking for working mmap()... yes
checking for MAP_NORESERVE... yes
checking for MAP_ANONYMOUS... yes
checking for MAP_ANON... yes
checking malloc.h usability... yes
checking malloc.h presence... yes
checking for malloc.h... yes
checking for ptmalloc... yes
checking for glibc... 2.32
checking for __builtin_expect... yes
checking for __builtin_constant_p... yes
checking for __builtin_prefetch... yes
checking for __func__... yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking for llvm-nm... /usr/lib/llvm/12/bin/llvm-nm
checking for GNU nm... no
checking for archiver... llvm-ar
checking for ranlib... llvm-ranlib
checking for basename... /usr/bin/basename
checking for dirname... /usr/bin/dirname
checking for readlink... /usr/bin/readlink
checking for time... no
checking for env... /usr/bin/env
checking for fca_config... no
checking for FCA_HOME setting...           (default)  "/usr"
checking if /usr is the FCA drivers install prefix... probably not - missing include/fca/fca_api.h
checking for working FCA configuration... no
configure: not updating unwritable cache config.cache
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating other/perlstart
config.status: creating config-aux/Makefile
config.status: creating other/Makefile
config.status: creating other/Makefile-libgasnet.mak
config.status: creating other/gasnet_tools-fragment.mak
config.status: creating tests/Makefile
config.status: creating Makefile
config.status: creating other/mpirun_common
config.status: creating other/fragment-head.mak
config.status: creating other/fragment-body.mak
config.status: creating other/Makefile-conduit.mak
config.status: creating other/ammpi/Makefile
config.status: creating other/amudp/Makefile
config.status: creating other/contrib/Makefile
config.status: creating other/contrib/gasnet_trace
config.status: creating other/firehose/Makefile
config.status: creating other/firehose/firehose.mak
config.status: creating other/fca/Makefile
config.status: creating other/fca/fca.mak
config.status: creating other/blcr/Makefile
config.status: creating other/blcr/blcr.mak
config.status: creating mpi-conduit/Makefile
config.status: creating mpi-conduit/conduit.mak
config.status: creating mpi-conduit/contrib/Makefile
config.status: creating mpi-conduit/contrib/gasnetrun_mpi
config.status: creating udp-conduit/Makefile
config.status: creating udp-conduit/conduit.mak
config.status: creating smp-conduit/Makefile
config.status: creating smp-conduit/conduit.mak
config.status: creating pami-conduit/Makefile
config.status: creating pami-conduit/conduit.mak
config.status: creating pami-conduit/contrib/Makefile
config.status: creating pami-conduit/contrib/gasnetrun_pami
config.status: creating ibv-conduit/Makefile
config.status: creating ibv-conduit/conduit.mak
config.status: creating ibv-conduit/contrib/Makefile
config.status: creating ibv-conduit/contrib/gasnetrun_ibv
config.status: creating mxm-conduit/Makefile
config.status: creating mxm-conduit/conduit.mak
config.status: creating mxm-conduit/contrib/Makefile
config.status: creating mxm-conduit/contrib/gasnetrun_mxm
config.status: creating psm-conduit/Makefile
config.status: creating psm-conduit/conduit.mak
config.status: creating psm-conduit/contrib/Makefile
config.status: creating psm-conduit/contrib/gasnetrun_psm
config.status: creating shmem-conduit/Makefile
config.status: creating shmem-conduit/conduit.mak
config.status: creating portals4-conduit/Makefile
config.status: creating portals4-conduit/conduit.mak
config.status: creating gemini-conduit/Makefile
config.status: creating gemini-conduit/conduit.mak
config.status: creating gemini-conduit/contrib/Makefile
config.status: creating gemini-conduit/contrib/gasnetrun_gemini
config.status: creating aries-conduit/Makefile
config.status: creating aries-conduit/conduit.mak
config.status: creating aries-conduit/contrib/Makefile
config.status: creating aries-conduit/contrib/gasnetrun_aries
config.status: creating ofi-conduit/Makefile
config.status: creating ofi-conduit/conduit.mak
config.status: creating ofi-conduit/contrib/Makefile
config.status: creating ofi-conduit/contrib/gasnetrun_ofi
config.status: creating gasnet_config.h
config.status: executing depfiles commands
config.status: executing default commands
--------------------------------------------------------------------
configure warning summary:
 
configure cache_file setting got lost - you may need to run a fresh ./Bootstrap
 

The sockets OFI provider was detected on your system and the ofi-conduit has been
configured for that provider. If that is not your desired provider, override this by using the
--with-ofi-provider=<provider name> configure flag. See the ofi-conduit README for details.
 
----------------------------------------------------------------------
GASNet configuration:

 Portable conduits:
 -----------------
  Portable SMP-loopback conduit (smp)                ON    (auto)
  Portable OpenFabrics Interfaces conduit (ofi)      ON    (auto)
  Portable Portals4 conduit (portals4)               OFF   (not found)
  Portable UDP/IP conduit (udp)                      ON    (auto)
  Portable MPI conduit (mpi)                         ON    (enabled)

 Native, high-performance conduits:
 ---------------------------------
  IBM BlueGene/Q / Power775 PAMI conduit (pami)      OFF   (not found)
  InfiniBand IB Verbs conduit (ibv)                  OFF   (disabled)
  Mellanox InfiniBand MXM conduit (mxm)              OFF   (not found)
  Intel OmniPath PSM2 conduit (psm)                  OFF   (not found)
  Cray XE/XK Gemini conduit (gemini)                 OFF   (not found)
  Cray XC Aries conduit (aries)                      OFF   (not found)
  SGI Altix / Cray X1 Shmem conduit (shmem)          OFF   (not found)

 Some conduits require --enable-XXX configure flags and/or additional
 variables providing the install location of vendor drivers.
 See the GASNet documentation for details.

 Misc Settings
 -------------
  MPI compatibility:      yes
  Pthreads support:       yes
  Segment config:         fast
  PSHM support:           posix
  FCA support:            no
  BLCR support:           no
----------------------------------------------------------------------
>>> Source configured.
 * --------------------------- ACCESS VIOLATION SUMMARY ---------------------------
 * LOG FILE: "/var/tmp/portage/sys-cluster/gasnet-1.30.0/temp/sandbox.log"
 * 
VERSION 1.0
FORMAT: F - Function called
FORMAT: S - Access Status
FORMAT: P - Path as passed to function
FORMAT: A - Absolute Path (not canonical)
FORMAT: R - Canonical Path
FORMAT: C - Command Line

F: open_wr
S: deny
P: /dev/kfd
A: /dev/kfd
R: /dev/kfd
C: fi_info --provider=psm2 

F: open_wr
S: deny
P: /dev/kfd
A: /dev/kfd
R: /dev/kfd
C: fi_info --provider=gni 

F: open_wr
S: deny
P: /dev/kfd
A: /dev/kfd
R: /dev/kfd
C: fi_info --provider=sockets 
 * --------------------------------------------------------------------------------