build log

build_log (text/plain), 118.98 KB, created by Steven Trogdon on 2021-03-16 23:19:54 UTC

[32;01m * [39;49;00mPackage:    dev-lang/R-3.4.1
[32;01m * [39;49;00mRepository: gentoo
[32;01m * [39;49;00mMaintainer: [e-mail]
[32;01m * [39;49;00mUSE:        X abi_x86_64 amd64 cairo elibc_glibc icu jpeg kernel_linux nls openmp png readline tiff userland_GNU
[32;01m * [39;49;00mFEATURES:   network-sandbox preserve-libs sandbox userpriv usersandbox
 [32;01m*[0m Using following Fortran compiler:
 [32;01m*[0m   F77: x86_64-pc-linux-gnu-gfortran
 [32;01m*[0m   FC:  x86_64-pc-linux-gnu-gfortran
 [32;01m*[0m x86_64-pc-linux-gnu-gfortran has OPENMP support
>>> Unpacking source...
>>> Unpacking R-3.4.1.tar.gz to /var/tmp/portage/dev-lang/R-3.4.1/work
>>> Unpacking R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion to /var/tmp/portage/dev-lang/R-3.4.1/work
unpack R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion: file format not recognized. Ignoring.
>>> Source unpacked in /var/tmp/portage/dev-lang/R-3.4.1/work
>>> Preparing source in /var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1 ...
 [32;01m*[0m Applying R-3.4.1-parallel.patch ...
[A[84C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Applying R-3.4.1-rmath-shared.patch ...
[A[84C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running aclocal -I m4 ...
[A[84C [34;01m[ [32;01mok[34;01m ][0m
 [32;01m*[0m Running autoconf ...
[A[84C [34;01m[ [32;01mok[34;01m ][0m
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1 ...
 * econf: updating R-3.4.1/tools/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating R-3.4.1/tools/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating R-3.4.1/config.guess with /usr/share/gnuconfig/config.guess
 * econf: updating R-3.4.1/config.sub with /usr/share/gnuconfig/config.sub
./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --docdir=/usr/share/doc/R-3.4.1 --htmldir=/usr/share/doc/R-3.4.1/html --libdir=/usr/lib64 --enable-byte-compiled-packages --enable-R-shlib --disable-R-framework --with-blas=-lblas  rdocdir=/usr/share/doc/R-3.4.1 --disable-java --enable-nls --enable-openmp --disable-R-profiling --disable-memory-profiling --disable-static --disable-R-static-lib --with-cairo --with-ICU --with-jpeglib --without-lapack --with-recommended-packages --with-libpng --with-readline --with-libtiff --without-tcltk --without-tk-config --without-tcl-config --with-x
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
checking for working aclocal... found
checking for working autoconf... found
checking for working automake... found
checking for working autoheader... found
checking whether ln -s works... yes
checking for bison... bison -y
checking for ar... ar
checking for a BSD-compatible install... /usr/lib/portage/python3.9/ebuild-helpers/xattr/install -c
checking for sed... /bin/sed
checking for which... /usr/bin/which
checking for /usr/bin/less... /usr/bin/less
checking for gtar... no
checking for gnutar... no
checking for tar... /bin/tar
checking for tex... no
checking for pdftex... no
configure: WARNING: you cannot build PDF versions of the R manuals
checking for pdflatex... no
configure: WARNING: you cannot build PDF versions of vignettes and help pages
checking for makeindex... no
checking for texi2any... /usr/bin/texi2any
checking whether texi2any version is at least 5.1... yes
checking for ginstall-info... no
checking for install-info... /usr/bin/install-info
checking for texi2dvi... /usr/bin/texi2dvi
checking for kpsewhich... /usr/bin/kpsewhich
checking for latex inconsolata package... warning: kpathsea: configuration file texmf.cnf not found in these directories: /usr/bin:/usr/bin/share/texmf-local/web2c:/usr/bin/share/texmf-dist/web2c:/usr/bin/share/texmf/web2c:/usr/bin/texmf-local/web2c:/usr/bin/texmf-dist/web2c:/usr/bin/texmf/web2c:/usr:/usr/share/texmf-local/web2c:/usr/share/texmf-dist/web2c:/usr/share/texmf/web2c:/usr/texmf-local/web2c:/usr/texmf-dist/web2c:/usr/texmf/web2c://texmf-local/web2c:/://share/texmf-local/web2c://share/texmf-dist/web2c://share/texmf/web2c://texmf-local/web2c://texmf-dist/web2c://texmf/web2c.
warning: kpathsea: configuration file texmf.cnf not found in these directories: /usr/bin:/usr/bin/share/texmf-local/web2c:/usr/bin/share/texmf-dist/web2c:/usr/bin/share/texmf/web2c:/usr/bin/texmf-local/web2c:/usr/bin/texmf-dist/web2c:/usr/bin/texmf/web2c:/usr:/usr/share/texmf-local/web2c:/usr/share/texmf-dist/web2c:/usr/share/texmf/web2c:/usr/texmf-local/web2c:/usr/texmf-dist/web2c:/usr/texmf/web2c://texmf-local/web2c:/://share/texmf-local/web2c://share/texmf-dist/web2c://share/texmf/web2c://texmf-local/web2c://texmf-dist/web2c://texmf/web2c.
missing
configure: WARNING: neither inconsolata.sty nor zi4.sty found: PDF vignettes and package manuals will not be rendered optimally
checking for unzip... /usr/bin/unzip
checking for zip... no
checking for gzip... /bin/gzip
checking for bzip2... /bin/bzip2
using default browser ... /usr/bin/xdg-open
checking for /usr/bin/xdg-open... /usr/bin/xdg-open
checking for notangle... false
checking for realpath... /usr/bin/realpath
checking for pkg-config... /usr/bin/pkg-config
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -g... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking whether x86_64-pc-linux-gnu-gcc needs -traditional... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking how to run the C preprocessor... x86_64-pc-linux-gnu-gcc -E
defining F77 to be x86_64-pc-linux-gnu-gfortran
checking for x86_64-pc-linux-gnu-g77... x86_64-pc-linux-gnu-gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether x86_64-pc-linux-gnu-gfortran accepts -g... yes
checking for x86_64-pc-linux-gnu-g++... x86_64-pc-linux-gnu-g++
checking whether we are using the GNU C++ compiler... yes
checking whether x86_64-pc-linux-gnu-g++ accepts -g... yes
checking whether x86_64-pc-linux-gnu-g++ -march=native -O2 -pipe can compile C++ code... yes
checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E
checking whether __attribute__((visibility())) is supported... yes
checking whether x86_64-pc-linux-gnu-gcc accepts -fvisibility... yes
checking whether x86_64-pc-linux-gnu-gfortran accepts -fvisibility... yes
checking for x86_64-pc-linux-gnu-gcc... x86_64-pc-linux-gnu-gcc
checking whether we are using the GNU Objective C compiler... no
checking whether x86_64-pc-linux-gnu-gcc accepts -g... no
checking for Objective C++ compiler... trying some possibilities
checking whether x86_64-pc-linux-gnu-g++ can compile ObjC++... no
no working ObjC++ compiler found
checking how to print strings... printf
checking for a sed that does not truncate output... (cached) /bin/sed
checking for fgrep... /bin/grep -F
checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-pc-linux-gnu-nm -B
checking the name lister (/usr/bin/x86_64-pc-linux-gnu-nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/x86_64-pc-linux-gnu/bin/ld option to reload object files... -r
checking for x86_64-pc-linux-gnu-objdump... x86_64-pc-linux-gnu-objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-pc-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-pc-linux-gnu-ar... (cached) ar
checking for archiver @FILE support... @
checking for x86_64-pc-linux-gnu-strip... x86_64-pc-linux-gnu-strip
checking for x86_64-pc-linux-gnu-ranlib... x86_64-pc-linux-gnu-ranlib
checking for gawk... gawk
checking command to parse /usr/bin/x86_64-pc-linux-gnu-nm -B output from x86_64-pc-linux-gnu-gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for x86_64-pc-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if x86_64-pc-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no
checking for x86_64-pc-linux-gnu-gcc option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-gcc static flag -static works... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gcc supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gcc linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E
checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64
checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC
checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes
checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for x86_64-pc-linux-gnu-gfortran option to produce PIC... -fPIC
checking if x86_64-pc-linux-gnu-gfortran PIC flag -fPIC works... yes
checking if x86_64-pc-linux-gnu-gfortran static flag -static works... yes
checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... yes
checking if x86_64-pc-linux-gnu-gfortran supports -c -o file.o... (cached) yes
checking whether the x86_64-pc-linux-gnu-gfortran linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for cos in -lm... yes
checking for sin in -lm... yes
checking for dlopen in -ldl... yes
checking readline/history.h usability... yes
checking readline/history.h presence... yes
checking for readline/history.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking for rl_callback_read_char in -lreadline... yes
checking for history_truncate_file... yes
checking whether rl_callback_sigcleanup exists and is declared... yes
checking whether rl_completion_matches exists and is declared... yes
checking whether rl_resize_terminal exists and is declared... yes
checking whether rl_sort_completion_matches exists and is declared... yes
checking for ANSI C header files... (cached) yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking for dlfcn.h... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking glob.h usability... yes
checking glob.h presence... yes
checking for glob.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for strings.h... (cached) yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking for unistd.h... (cached) yes
checking utime.h usability... yes
checking utime.h presence... yes
checking for utime.h... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dl.h usability... no
checking dl.h presence... no
checking for dl.h... no
checking elf.h usability... yes
checking elf.h presence... yes
checking for elf.h... yes
checking features.h usability... yes
checking features.h presence... yes
checking for features.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking langinfo.h usability... yes
checking langinfo.h presence... yes
checking for langinfo.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking stdalign.h usability... yes
checking stdalign.h presence... yes
checking for stdalign.h... yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking for inttypes.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking for stdint.h... (cached) yes
checking for string.h... (cached) yes
checking whether setjmp.h is POSIX.1 compatible... yes
checking whether sigsetjmp is declared... yes
checking whether siglongjmp is declared... yes
checking for GNU C library with version >= 2... yes
checking return type of signal handlers... void
checking for uint64_t... yes
checking for int64_t... yes
checking for int_fast64_t... yes
checking for pid_t... yes
checking for size_t... yes
checking whether SIZE_MAX is declared... yes
checking for blkcnt_t... yes
checking for type of socket length... socklen_t *
checking for stack_t... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for x86_64-pc-linux-gnu-gcc option to accept ISO C99... none needed
checking for x86_64-pc-linux-gnu-gcc option to accept ISO Standard C... (cached) none needed
checking for inline... inline
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of double... 8
checking size of size_t... 8
checking size of long double... 16
checking whether we can compute C Make dependencies... yes, using $(CC) -MM
checking whether x86_64-pc-linux-gnu-gcc supports -c -o FILE.lo... yes
checking for x86_64-pc-linux-gnu-gcc option to support OpenMP... -fopenmp
checking how to get verbose linking output from x86_64-pc-linux-gnu-gfortran... -v
checking for Fortran 77 libraries of x86_64-pc-linux-gnu-gfortran...  -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../.. -lgfortran -lm -lquadmath
checking how to get verbose linking output from x86_64-pc-linux-gnu-gcc... -v
checking for C libraries of x86_64-pc-linux-gnu-gcc...  -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../.. -lgcc_s
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking whether x86_64-pc-linux-gnu-gfortran appends underscores to external names... yes
checking whether x86_64-pc-linux-gnu-gfortran appends extra underscores to external names... no
checking whether mixed C/Fortran code can be run... yes
checking whether x86_64-pc-linux-gnu-gfortran and x86_64-pc-linux-gnu-gcc agree on int and double... yes
checking whether x86_64-pc-linux-gnu-gfortran and x86_64-pc-linux-gnu-gcc agree on double complex... yes
checking for x86_64-pc-linux-gnu-gfortran option to support OpenMP... -fopenmp
checking whether x86_64-pc-linux-gnu-g++ accepts -M for generating dependencies... yes
checking for x86_64-pc-linux-gnu-g++ option to support OpenMP... -fopenmp
checking whether we can compute ObjC Make dependencies... no
checking for ObjC runtime library... 
checking whether x86_64-pc-linux-gnu-gcc accepts -fobjc-exceptions... no
checking whether C runtime needs -D__NO_MATH_INLINES... no
checking for xmkmf... no
checking whether x86_64-pc-linux-gnu-g++  supports C++98 features by default... no
checking whether x86_64-pc-linux-gnu-g++  supports C++98 features with -std=gnu++98... yes
checking whether x86_64-pc-linux-gnu-g++  supports C++11 features by default... no
checking whether x86_64-pc-linux-gnu-g++  supports C++11 features with -std=gnu++11... yes
checking whether x86_64-pc-linux-gnu-g++  supports C++14 features by default... yes
checking whether x86_64-pc-linux-gnu-g++  supports C++17 features by default... no
checking whether x86_64-pc-linux-gnu-g++  supports C++17 features with -std=gnu++17... yes
checking for off_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking whether alloca is declared... yes
checking whether expm1 exists and is declared... yes
checking whether hypot exists and is declared... yes
checking whether log1p exists and is declared... yes
checking whether log1pl exists and is declared... yes
checking whether log2 exists and is declared... yes
checking whether log10 exists and is declared... yes
checking whether nearbyint exists and is declared... yes
checking whether nearbyintl exists and is declared... yes
checking whether powl exists and is declared... yes
checking whether rint exists and is declared... yes
checking whether rintl exists and is declared... yes
checking whether va_copy exists and is declared... yes
checking for isblank... yes
checking sunmath.h usability... no
checking sunmath.h presence... no
checking for sunmath.h... no
checking for cospi in -lsunmath... no
checking for atanpi... no
checking for atan2pi... no
checking for cospi... no
checking for exp10... yes
checking for pown... no
checking for sinpi... no
checking for tanpi... no
checking for __cospi... no
checking for __sinpi... no
checking for __tanpi... no
checking for fseeko... yes
checking for ftello... yes
checking for matherr... no
checking whether fcntl exists and is declared... yes
checking whether getgrgid exists and is declared... yes
checking whether getpwuid exists and is declared... yes
checking whether kill exists and is declared... yes
checking whether sigaction exists and is declared... yes
checking whether sigaltstack exists and is declared... yes
checking whether sigemptyset exists and is declared... yes
checking whether fdopen exists and is declared... yes
checking whether popen exists and is declared... yes
checking whether getline exists and is declared... yes
checking whether select exists and is declared... yes
checking whether setenv exists and is declared... yes
checking whether unsetenv exists and is declared... yes
checking whether getrlimit exists and is declared... yes
checking whether getrusage exists and is declared... yes
checking whether getpriority exists and is declared... yes
checking whether chmod exists and is declared... yes
checking whether mkfifo exists and is declared... yes
checking whether stat exists and is declared... yes
checking whether umask exists and is declared... yes
checking whether gettimeofday exists and is declared... yes
checking whether utimes exists and is declared... yes
checking whether times exists and is declared... yes
checking whether gmtime_r exists and is declared... yes
checking whether localtime_r exists and is declared... yes
checking whether nl_langinfo exists and is declared... yes
checking whether access exists and is declared... yes
checking whether chdir exists and is declared... yes
checking whether execv exists and is declared... yes
checking whether ftruncate exists and is declared... yes
checking whether getcwd exists and is declared... yes
checking whether geteuid exists and is declared... yes
checking whether getuid exists and is declared... yes
checking whether link exists and is declared... yes
checking whether readlink exists and is declared... yes
checking whether symlink exists and is declared... yes
checking whether sysconf exists and is declared... yes
checking whether sched_setaffinity exists and is declared... yes
checking whether sched_getaffinity exists and is declared... yes
checking whether utime exists and is declared... yes
checking whether utimensat exists and is declared... yes
checking for clock_gettime in -lrt... yes
checking whether clock_gettime exists and is declared... yes
checking whether timespec_get exists and is declared... yes
checking for putenv... yes
checking whether putenv is declared... yes
checking for vasprintf... yes
checking whether vasprintf is declared... yes
checking for mempcpy... yes
checking for realpath... yes
checking whether realpath is declared... yes
checking whether glob exists and is declared... yes
checking for dladdr... yes
checking for dlsym... yes
checking whether dladdr is declared... yes
checking whether dlsym is declared... yes
checking whether RTLD_DEFAULT is declared... yes
checking whether RTLD_NEXT is declared... yes
checking for isnan... yes
checking whether isfinite is declared... yes
checking whether isnan is declared... yes
checking whether you have IEEE 754 floating-point arithmetic... yes
checking whether putenv("FOO") can unset an environment variable... yes
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Configuring src/extra/intl directory
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checking for NL_LOCALE_NAME macro... yes
checking for bison... bison
checking version of bison... 3.7.3, ok
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checking whether to use NLS... yes
checking where the gettext function comes from... libc
Finished configuring src/extra/intl directory

checking whether OpenMP SIMD reduction is supported... yes
using as R_SHELL for scripts ... /bin/sh
configure: creating ./config.status
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R is now configured for x86_64-pc-linux-gnu

  Source directory:          .
  Installation directory:    /usr

  C compiler:                x86_64-pc-linux-gnu-gcc  -march=native -O2 -pipe
  Fortran 77 compiler:       x86_64-pc-linux-gnu-gfortran  -march=native -O2 -pipe

  Default C++ compiler:      x86_64-pc-linux-gnu-g++   -march=native -O2 -pipe
  C++98 compiler:            x86_64-pc-linux-gnu-g++ -std=gnu++98 -march=native -O2 -pipe
  C++11 compiler:            x86_64-pc-linux-gnu-g++ -std=gnu++11 -march=native -O2 -pipe
  C++14 compiler:            x86_64-pc-linux-gnu-g++  -march=native -O2 -pipe
  C++17 compiler:            x86_64-pc-linux-gnu-g++ -std=gnu++17 -march=native -O2 -pipe
  Fortran 90/95 compiler:    x86_64-pc-linux-gnu-gfortran -march=native -O2 -pipe
  Obj-C compiler:	     x86_64-pc-linux-gnu-gcc 

  Interfaces supported:      X11
  External libraries:        readline, BLAS(generic), curl
  Additional capabilities:   PNG, JPEG, TIFF, NLS, cairo, ICU
  Options enabled:           shared R library

  Capabilities skipped:      
  Options not enabled:       shared BLAS, R profiling, memory profiling

  Recommended packages:      yes

configure: WARNING: you cannot build PDF versions of the R manuals
configure: WARNING: you cannot build PDF versions of vignettes and help pages
configure: WARNING: neither inconsolata.sty nor zi4.sty found: PDF vignettes and package manuals will not be rendered optimally
>>> Source configured.
>>> Compiling source in /var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1 ...
make -j9 AR=x86_64-pc-linux-gnu-ar 
make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/m4'
make[1]: Nothing to be done for 'R'.
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make[1]: Nothing to be done for 'R'.
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make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/doc'
make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/doc/html'
make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/doc/html'
make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/doc/manual'
make[2]: Nothing to be done for 'R'.
make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/doc/manual'
make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/doc'
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make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src'
make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/scripts'
creating src/scripts/R.fe
make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/scripts'
mkdir -p -- ../../bin
make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/scripts'
make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/scripts'
make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/include'
mkdir -p -- ../../include
make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/include/R_ext'
mkdir -p -- ../../../include/R_ext
make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/include/R_ext'
make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/include'
make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra'
make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra/tre'
make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra/tre'
making regcomp.d from regcomp.c
making regexec.d from regexec.c
making regerror.d from regerror.c
making tre-ast.d from tre-ast.c
making tre-compile.d from tre-compile.c
making tre-match-approx.d from tre-match-approx.c
making tre-match-backtrack.d from tre-match-backtrack.c
making tre-match-parallel.d from tre-match-parallel.c
making tre-mem.d from tre-mem.c
making tre-parse.d from tre-parse.c
making tre-stack.d from tre-stack.c
making xmalloc.d from xmalloc.c
make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra/tre'
make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra/tre'
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -fvisibility=hidden -c regcomp.c -o regcomp.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -fvisibility=hidden -c regerror.c -o regerror.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -fvisibility=hidden -c regexec.c -o regexec.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -fvisibility=hidden -c tre-ast.c -o tre-ast.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -fvisibility=hidden -c tre-compile.c -o tre-compile.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -fvisibility=hidden -c tre-mem.c -o tre-mem.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -fvisibility=hidden -c tre-parse.c -o tre-parse.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -fvisibility=hidden -c tre-stack.c -o tre-stack.o
x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -fvisibility=hidden -c xmalloc.c -o xmalloc.o
x86_64-pc-linux-gnu-ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o
x86_64-pc-linux-gnu-ranlib libtre.a
make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra/tre'
make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra/tre'
make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra'
make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/appl'
making integrate.d from integrate.c
making interv.d from interv.c
making maxcol.d from maxcol.c
making optim.d from optim.c
making pretty.d from pretty.c
making uncmin.d from uncmin.c
make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/appl'
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c integrate.c -o integrate.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c interv.c -o interv.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c maxcol.c -o maxcol.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c optim.c -o optim.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pretty.c -o pretty.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c uncmin.c -o uncmin.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dchdc.f -o dchdc.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dpbfa.f -o dpbfa.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dpbsl.f -o dpbsl.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dpoco.f -o dpoco.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dpodi.f -o dpodi.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dpofa.f -o dpofa.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dposl.f -o dposl.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dqrdc.f -o dqrdc.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dqrdc2.f -o dqrdc2.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dqrls.f -o dqrls.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dqrsl.f -o dqrsl.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dqrutl.f -o dqrutl.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dsvdc.f -o dsvdc.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dtrco.f -o dtrco.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c dtrsl.f -o dtrsl.o
x86_64-pc-linux-gnu-ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o 
x86_64-pc-linux-gnu-ranlib libappl.a
make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/appl'
make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/appl'
make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/nmath'
making mlutils.d from mlutils.c
making i1mach.d from i1mach.c
making d1mach.d from d1mach.c
making fmin2.d from fmin2.c
making fmax2.d from fmax2.c
making sign.d from sign.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
making fprec.d from fprec.c
making fsign.d from fsign.c
making imax2.d from imax2.c
making imin2.d from imin2.c
making chebyshev.d from chebyshev.c
making log1p.d from log1p.c
making expm1.d from expm1.c
making lgammacor.d from lgammacor.c
making gammalims.d from gammalims.c
making stirlerr.d from stirlerr.c
making bd0.d from bd0.c
making gamma.d from gamma.c
making lgamma.d from lgamma.c
making gamma_cody.d from gamma_cody.c
making beta.d from beta.c
making lbeta.d from lbeta.c
making polygamma.d from polygamma.c
making cospi.d from cospi.c
making bessel_i.d from bessel_i.c
making bessel_j.d from bessel_j.c
making bessel_k.d from bessel_k.c
making bessel_y.d from bessel_y.c
making choose.d from choose.c
making snorm.d from snorm.c
making sexp.d from sexp.c
making dgamma.d from dgamma.c
making pgamma.d from pgamma.c
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
making punif.d from punif.c
making dunif.d from dunif.c
making qunif.d from qunif.c
making runif.d from runif.c
making dnorm.d from dnorm.c
making pnorm.d from pnorm.c
making qnorm.d from qnorm.c
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making rnorm.d from rnorm.c
making qlnorm.d from qlnorm.c
making rlnorm.d from rlnorm.c
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
making dnf.d from dnf.c
making dt.d from dt.c
making pt.d from pt.c
making qt.d from qt.c
making rt.d from rt.c
making dnt.d from dnt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
making rnchisq.d from rnchisq.c
making dbinom.d from dbinom.c
making qbinom.d from qbinom.c
making pbinom.d from pbinom.c
making rbinom.d from rbinom.c
making rmultinom.d from rmultinom.c
making dcauchy.d from dcauchy.c
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
making pexp.d from pexp.c
making qexp.d from qexp.c
making rexp.d from rexp.c
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
making rgeom.d from rgeom.c
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
making rhyper.d from rhyper.c
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
making rnbinom.d from rnbinom.c
making dpois.d from dpois.c
making ppois.d from ppois.c
making qpois.d from qpois.c
making rpois.d from rpois.c
making dweibull.d from dweibull.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making plogis.d from plogis.c
making qlogis.d from qlogis.c
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making qnbeta.d from qnbeta.c
making pnf.d from pnf.c
making pnt.d from pnt.c
making qnf.d from qnf.c
making qnt.d from qnt.c
making ptukey.d from ptukey.c
making qtukey.d from qtukey.c
making wilcox.d from wilcox.c
making toms708.d from toms708.c
making signrank.d from signrank.c
make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/nmath'
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c mlutils.c -o mlutils.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c d1mach.c -o d1mach.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c i1mach.c -o i1mach.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c fmax2.c -o fmax2.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c fmin2.c -o fmin2.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c fprec.c -o fprec.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c fround.c -o fround.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c ftrunc.c -o ftrunc.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c sign.c -o sign.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c fsign.c -o fsign.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c imax2.c -o imax2.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c imin2.c -o imin2.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c chebyshev.c -o chebyshev.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c log1p.c -o log1p.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c expm1.c -o expm1.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c lgammacor.c -o lgammacor.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c gammalims.c -o gammalims.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c stirlerr.c -o stirlerr.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c bd0.c -o bd0.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c gamma.c -o gamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c lgamma.c -o lgamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c gamma_cody.c -o gamma_cody.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c beta.c -o beta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c lbeta.c -o lbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c polygamma.c -o polygamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c cospi.c -o cospi.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c bessel_i.c -o bessel_i.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c bessel_j.c -o bessel_j.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c bessel_k.c -o bessel_k.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c bessel_y.c -o bessel_y.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c choose.c -o choose.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c snorm.c -o snorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c sexp.c -o sexp.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dgamma.c -o dgamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pgamma.c -o pgamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qgamma.c -o qgamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rgamma.c -o rgamma.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dbeta.c -o dbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pbeta.c -o pbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qbeta.c -o qbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rbeta.c -o rbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dunif.c -o dunif.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c punif.c -o punif.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qunif.c -o qunif.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c runif.c -o runif.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dnorm.c -o dnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pnorm.c -o pnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qnorm.c -o qnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rnorm.c -o rnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dlnorm.c -o dlnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c plnorm.c -o plnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qlnorm.c -o qlnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rlnorm.c -o rlnorm.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c df.c -o df.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pf.c -o pf.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qf.c -o qf.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rf.c -o rf.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dnf.c -o dnf.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dt.c -o dt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pt.c -o pt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qt.c -o qt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rt.c -o rt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dnt.c -o dnt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dchisq.c -o dchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pchisq.c -o pchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qchisq.c -o qchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rchisq.c -o rchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rnchisq.c -o rnchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dbinom.c -o dbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pbinom.c -o pbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qbinom.c -o qbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rbinom.c -o rbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rmultinom.c -o rmultinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dcauchy.c -o dcauchy.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pcauchy.c -o pcauchy.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qcauchy.c -o qcauchy.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rcauchy.c -o rcauchy.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dexp.c -o dexp.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pexp.c -o pexp.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qexp.c -o qexp.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rexp.c -o rexp.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dgeom.c -o dgeom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pgeom.c -o pgeom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qgeom.c -o qgeom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rgeom.c -o rgeom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dhyper.c -o dhyper.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c phyper.c -o phyper.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qhyper.c -o qhyper.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rhyper.c -o rhyper.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dnbinom.c -o dnbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pnbinom.c -o pnbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qnbinom.c -o qnbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rnbinom.c -o rnbinom.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dpois.c -o dpois.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c ppois.c -o ppois.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qpois.c -o qpois.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rpois.c -o rpois.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dweibull.c -o dweibull.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pweibull.c -o pweibull.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qweibull.c -o qweibull.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rweibull.c -o rweibull.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dlogis.c -o dlogis.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c plogis.c -o plogis.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qlogis.c -o qlogis.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rlogis.c -o rlogis.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dnchisq.c -o dnchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pnchisq.c -o pnchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qnchisq.c -o qnchisq.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dnbeta.c -o dnbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pnbeta.c -o pnbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qnbeta.c -o qnbeta.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pnf.c -o pnf.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c pnt.c -o pnt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qnf.c -o qnf.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qnt.c -o qnt.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c ptukey.c -o ptukey.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qtukey.c -o qtukey.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c toms708.c -o toms708.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c wilcox.c -o wilcox.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c signrank.c -o signrank.o
x86_64-pc-linux-gnu-ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o
x86_64-pc-linux-gnu-ranlib libnmath.a
make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/nmath'
make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/nmath'
make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/unix'
config.status: creating src/unix/Makefile
making Rembedded.d from Rembedded.c
making dynload.d from dynload.c
making sys-std.d from sys-std.c
making sys-unix.d from sys-unix.c
making system.d from system.c
making X11.d from X11.c
make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/unix'
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c Rembedded.c -o Rembedded.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dynload.c -o dynload.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c system.c -o system.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c sys-unix.c -o sys-unix.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c sys-std.c -o sys-std.o
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c X11.c -o X11.o
x86_64-pc-linux-gnu-ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o
x86_64-pc-linux-gnu-ranlib libunix.a
make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/unix'
make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/unix'
x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H    -march=native -O2 -pipe  -Wl,-O1 -Wl,--as-needed -DR_HOME='"/usr/lib64/R"' \
  -o Rscript ./Rscript.c
make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/unix'
make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/unix'
make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/main'
config.status: creating src/main/Makefile
making CommandLineArgs.d from CommandLineArgs.c
making Renviron.d from Renviron.c
making RNG.d from RNG.c
making Rdynload.d from Rdynload.c
making agrep.d from agrep.c
making apply.d from apply.c
making arithmetic.d from arithmetic.c
making array.d from array.c
making attrib.d from attrib.c
making bind.d from bind.c
making builtin.d from builtin.c
making character.d from character.c
making colors.d from colors.c
making coerce.d from coerce.c
making complex.d from complex.c
making connections.d from connections.c
making context.d from context.c
making cum.d from cum.c
making dcf.d from dcf.c
making datetime.d from datetime.c
making debug.d from debug.c
making devices.d from devices.c
making deparse.d from deparse.c
making dotcode.d from dotcode.c
making dstruct.d from dstruct.c
making dounzip.d from dounzip.c
making duplicate.d from duplicate.c
making edit.d from edit.c
making engine.d from engine.c
making envir.d from envir.c
making errors.d from errors.c
making eval.d from eval.c
making format.d from format.c
making gevents.d from gevents.c
making gram.d from gram.c
making gram-ex.d from gram-ex.c
making graphics.d from graphics.c
making grep.d from grep.c
making identical.d from identical.c
making inlined.d from inlined.c
making inspect.d from inspect.c
making internet.d from internet.c
making iosupport.d from iosupport.c
making lapack.d from lapack.c
making list.d from list.c
making localecharset.d from localecharset.c
making logic.d from logic.c
making main.d from main.c
making mapply.d from mapply.c
making match.d from match.c
making memory.d from memory.c
making names.d from names.c
making options.d from options.c
making objects.d from objects.c
making paste.d from paste.c
making platform.d from platform.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making plotmath.d from plotmath.c
making print.d from print.c
making printarray.d from printarray.c
making printvector.d from printvector.c
making printutils.d from printutils.c
making qsort.d from qsort.c
making radixsort.d from radixsort.c
making random.d from random.c
making raw.d from raw.c
making relop.d from relop.c
making registration.d from registration.c
making rlocale.d from rlocale.c
making saveload.d from saveload.c
making scan.d from scan.c
making seq.d from seq.c
making serialize.d from serialize.c
making sort.d from sort.c
making source.d from source.c
making sprintf.d from sprintf.c
making split.d from split.c
making startup.d from startup.c
making subassign.d from subassign.c
making subscript.d from subscript.c
making subset.d from subset.c
making summary.d from summary.c
making sysutils.d from sysutils.c
making times.d from times.c
making unique.d from unique.c
making util.d from util.c
making version.d from version.c
making g_alab_her.d from g_alab_her.c
making g_cntrlify.d from g_cntrlify.c
making g_fontdb.d from g_fontdb.c
making g_her_glyph.d from g_her_glyph.c
making Rmain.d from Rmain.c
making alloca.d from alloca.c
making mkdtemp.d from mkdtemp.c
making strdup.d from strdup.c
making strncasecmp.d from strncasecmp.c
make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/main'
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c CommandLineArgs.c -o CommandLineArgs.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c Rdynload.c -o Rdynload.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c Renviron.c -o Renviron.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c RNG.c -o RNG.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c agrep.c -o agrep.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c apply.c -o apply.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c arithmetic.c -o arithmetic.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c array.c -o array.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c attrib.c -o attrib.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c bind.c -o bind.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c builtin.c -o builtin.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c character.c -o character.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c coerce.c -o coerce.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c colors.c -o colors.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c complex.c -o complex.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c connections.c -o connections.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c context.c -o context.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c cum.c -o cum.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dcf.c -o dcf.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c datetime.c -o datetime.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c debug.c -o debug.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c deparse.c -o deparse.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c devices.c -o devices.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dotcode.c -o dotcode.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dounzip.c -o dounzip.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c dstruct.c -o dstruct.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c duplicate.c -o duplicate.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c edit.c -o edit.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c engine.c -o engine.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c envir.c -o envir.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c errors.c -o errors.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c eval.c -o eval.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c format.c -o format.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c gevents.c -o gevents.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c gram.c -o gram.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c gram-ex.c -o gram-ex.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c graphics.c -o graphics.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c grep.c -o grep.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c identical.c -o identical.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c inlined.c -o inlined.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c inspect.c -o inspect.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c internet.c -o internet.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c iosupport.c -o iosupport.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c lapack.c -o lapack.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c list.c -o list.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c localecharset.c -o localecharset.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c logic.c -o logic.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c main.c -o main.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c mapply.c -o mapply.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c match.c -o match.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c memory.c -o memory.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c names.c -o names.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c objects.c -o objects.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c options.c -o options.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c paste.c -o paste.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c platform.c -o platform.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c plot.c -o plot.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c plot3d.c -o plot3d.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c plotmath.c -o plotmath.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c print.c -o print.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c printarray.c -o printarray.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c printvector.c -o printvector.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c printutils.c -o printutils.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c qsort.c -o qsort.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c radixsort.c -o radixsort.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c random.c -o random.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c raw.c -o raw.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c registration.c -o registration.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c relop.c -o relop.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c rlocale.c -o rlocale.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c saveload.c -o saveload.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c scan.c -o scan.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c seq.c -o seq.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c serialize.c -o serialize.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c sort.c -o sort.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c source.c -o source.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c split.c -o split.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c sprintf.c -o sprintf.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c startup.c -o startup.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c subassign.c -o subassign.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c subscript.c -o subscript.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c subset.c -o subset.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c summary.c -o summary.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c sysutils.c -o sysutils.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c times.c -o times.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c unique.c -o unique.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c util.c -o util.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c version.c -o version.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c g_alab_her.c -o g_alab_her.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c g_cntrlify.c -o g_cntrlify.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c g_fontdb.c -o g_fontdb.o
x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -march=native -O2 -pipe  -c g_her_glyph.c -o g_her_glyph.o
x86_64-pc-linux-gnu-gfortran  -fopenmp -fpic  -march=native -O2 -pipe  -c xxxpr.f -o xxxpr.o
In file included from [01m[K/usr/include/string.h:519[m[K,
                 from [01m[K../../src/include/Rinlinedfuns.h:73[m[K,
                 from [01m[K../../src/include/Rinternals.h:1357[m[K,
                 from [01m[K../../src/include/Defn.h:81[m[K,
                 from [01m[Keval.c:27[m[K:
In function ‘[01m[Kstrncpy[m[K’,
    inlined from ‘[01m[KinflateAssignmentCall[m[K’ at [01m[Keval.c:5787:5[m[K,
    inlined from ‘[01m[KR_getBCInterpreterExpression[m[K’ at [01m[Keval.c:5840:8[m[K:
[01m[K/usr/include/bits/string_fortified.h:91:10:[m[K [01;35m[Kwarning: [m[K‘[01m[K__builtin_strncpy[m[K’ specified bound depends on the length of the source argument [[01;35m[K-Wstringop-overflow=[m[K]
   91 |   return [01;35m[K__builtin___strncpy_chk (__dest, __src, __len, __bos (__dest))[m[K;
      |          [01;35m[K^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~[m[K
[01m[Keval.c:[m[K In function ‘[01m[KR_getBCInterpreterExpression[m[K’:
[01m[Keval.c:5782:19:[m[K [01;36m[Knote: [m[Klength computed here
 5782 |     size_t slen = [01;36m[Kstrlen(name)[m[K;
      |                   [01;36m[K^~~~~~~~~~~~[m[K
x86_64-pc-linux-gnu-gcc -shared -fopenmp -Wl,-O1 -Wl,--as-needed  -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o   `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a    -lblas  -lgfortran -lm -lquadmath   -lreadline  -lpcre -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n  
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: Rdynload.o:(.bss+0x40): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: Renviron.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: RNG.o:(.bss+0x10): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: agrep.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: apply.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: arithmetic.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: array.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: attrib.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: bind.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: builtin.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: character.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: coerce.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: colors.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: complex.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: connections.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: context.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: cum.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: dcf.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: datetime.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: debug.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: deparse.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: devices.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: dotcode.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: dounzip.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: dstruct.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: duplicate.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: edit.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: engine.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: envir.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: errors.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: eval.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: format.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: gevents.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: gram.o:(.bss+0x54): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: gram-ex.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: graphics.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: grep.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: identical.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: inlined.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: inspect.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: internet.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: iosupport.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: lapack.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: list.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: logic.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: main.o:(.bss+0x58): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: mapply.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: match.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: memory.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: names.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: objects.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: options.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: paste.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: platform.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: plot.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: plot3d.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: plotmath.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: print.o:(.bss+0x40): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: printarray.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: printvector.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: printutils.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: qsort.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: radixsort.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: random.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: raw.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: registration.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: relop.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: saveload.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: scan.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: seq.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: serialize.o:(.bss+0x8): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: sort.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: source.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: split.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: sprintf.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: startup.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: subassign.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: subscript.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: subset.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: summary.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: sysutils.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: times.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: unique.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: util.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: version.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: g_alab_her.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: g_cntrlify.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: g_fontdb.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: g_her_glyph.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../appl/optim.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/Rembedded.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/X11.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/dynload.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/sys-std.o:(.bss+0x8): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/sys-unix.o:(.bss+0x8): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/system.o:(.bss+0x20): multiple definition of `ptr_R_ProcessEvents'; ../unix/sys-unix.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/system.o:(.bss+0xc8): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: connections.o: warning: relocation against `R_OutputCon' in read-only section `.text'
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: connections.o: relocation R_X86_64_PC32 against symbol `R_OutputCon' can not be used when making a shared object; recompile with -fPIC
/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: final link failed: bad value
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:177: libR.so] Error 1
make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/main'
make[2]: *** [Makefile:135: R] Error 2
make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/main'
make[1]: *** [Makefile:28: R] Error 1
make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src'
make: *** [Makefile:61: R] Error 1
 [31;01m*[0m ERROR: dev-lang/R-3.4.1::gentoo failed (compile phase):
 [31;01m*[0m   emake failed
 [31;01m*[0m 
 [31;01m*[0m If you need support, post the output of `emerge --info '=dev-lang/R-3.4.1::gentoo'`,
 [31;01m*[0m the complete build log and the output of `emerge -pqv '=dev-lang/R-3.4.1::gentoo'`.
 [31;01m*[0m The complete build log is located at '/var/tmp/portage/dev-lang/R-3.4.1/temp/build.log'.
 [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/dev-lang/R-3.4.1/temp/environment'.
 [31;01m*[0m Working directory: '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1'
 [31;01m*[0m S: '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1'