* Package: dev-lang/R-3.4.1  * Repository: gentoo  * Maintainer: sci-mathematics@gentoo.org  * USE: X abi_x86_64 amd64 cairo elibc_glibc icu jpeg kernel_linux nls openmp png readline tiff userland_GNU  * FEATURES: network-sandbox preserve-libs sandbox userpriv usersandbox * Using following Fortran compiler: * F77: x86_64-pc-linux-gnu-gfortran * FC: x86_64-pc-linux-gnu-gfortran * x86_64-pc-linux-gnu-gfortran has OPENMP support >>> Unpacking source... >>> Unpacking R-3.4.1.tar.gz to /var/tmp/portage/dev-lang/R-3.4.1/work >>> Unpacking R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion to /var/tmp/portage/dev-lang/R-3.4.1/work unpack R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion: file format not recognized. Ignoring. >>> Source unpacked in /var/tmp/portage/dev-lang/R-3.4.1/work >>> Preparing source in /var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1 ... * Applying R-3.4.1-parallel.patch ...  [ ok ] * Applying R-3.4.1-rmath-shared.patch ...  [ ok ] * Running aclocal -I m4 ...  [ ok ] * Running autoconf ...  [ ok ] >>> Source prepared. >>> Configuring source in /var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1 ... * econf: updating R-3.4.1/tools/config.guess with /usr/share/gnuconfig/config.guess * econf: updating R-3.4.1/tools/config.sub with /usr/share/gnuconfig/config.sub * econf: updating R-3.4.1/config.guess with /usr/share/gnuconfig/config.guess * econf: updating R-3.4.1/config.sub with /usr/share/gnuconfig/config.sub ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --docdir=/usr/share/doc/R-3.4.1 --htmldir=/usr/share/doc/R-3.4.1/html --libdir=/usr/lib64 --enable-byte-compiled-packages --enable-R-shlib --disable-R-framework --with-blas=-lblas rdocdir=/usr/share/doc/R-3.4.1 --disable-java --enable-nls --enable-openmp --disable-R-profiling --disable-memory-profiling --disable-static --disable-R-static-lib --with-cairo --with-ICU --with-jpeglib --without-lapack --with-recommended-packages --with-libpng --with-readline --with-libtiff --without-tcltk --without-tk-config --without-tcl-config --with-x checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu loading site script './config.site' loading build-specific script './config.site' checking for pwd... /bin/pwd checking whether builddir is srcdir... yes checking for working aclocal... found checking for working autoconf... found checking for working automake... found checking for working autoheader... found checking whether ln -s works... yes checking for bison... bison -y checking for ar... ar checking for a BSD-compatible install... /usr/lib/portage/python3.9/ebuild-helpers/xattr/install -c checking for sed... /bin/sed checking for which... /usr/bin/which checking for /usr/bin/less... /usr/bin/less checking for gtar... no checking for gnutar... no checking for tar... /bin/tar checking for tex... no checking for pdftex... no configure: WARNING: you cannot build PDF versions of the R manuals checking for pdflatex... no configure: WARNING: you cannot build PDF versions of vignettes and help pages checking for makeindex... no checking for texi2any... /usr/bin/texi2any checking whether texi2any version is at least 5.1... yes checking for ginstall-info... no checking for install-info... /usr/bin/install-info checking for texi2dvi... /usr/bin/texi2dvi checking for kpsewhich... /usr/bin/kpsewhich checking for latex inconsolata package... warning: kpathsea: configuration file texmf.cnf not found in these directories: /usr/bin:/usr/bin/share/texmf-local/web2c:/usr/bin/share/texmf-dist/web2c:/usr/bin/share/texmf/web2c:/usr/bin/texmf-local/web2c:/usr/bin/texmf-dist/web2c:/usr/bin/texmf/web2c:/usr:/usr/share/texmf-local/web2c:/usr/share/texmf-dist/web2c:/usr/share/texmf/web2c:/usr/texmf-local/web2c:/usr/texmf-dist/web2c:/usr/texmf/web2c://texmf-local/web2c:/://share/texmf-local/web2c://share/texmf-dist/web2c://share/texmf/web2c://texmf-local/web2c://texmf-dist/web2c://texmf/web2c. warning: kpathsea: configuration file texmf.cnf not found in these directories: 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(cached) /bin/sed checking for fgrep... /bin/grep -F checking for ld used by x86_64-pc-linux-gnu-gcc... /usr/x86_64-pc-linux-gnu/bin/ld checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-pc-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-pc-linux-gnu-nm -B) interface... 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GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... x86_64-pc-linux-gnu-g++ -E checking for ld used by x86_64-pc-linux-gnu-g++... /usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64 checking if the linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-pc-linux-gnu-g++ linker (/usr/x86_64-pc-linux-gnu/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-pc-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-pc-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-pc-linux-gnu-g++ static flag -static works... yes checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-pc-linux-gnu-g++ supports -c -o file.o... 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(cached) none needed checking for inline... inline checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of double... 8 checking size of size_t... 8 checking size of long double... 16 checking whether we can compute C Make dependencies... yes, using $(CC) -MM checking whether x86_64-pc-linux-gnu-gcc supports -c -o FILE.lo... yes checking for x86_64-pc-linux-gnu-gcc option to support OpenMP... -fopenmp checking how to get verbose linking output from x86_64-pc-linux-gnu-gfortran... -v checking for Fortran 77 libraries of x86_64-pc-linux-gnu-gfortran... -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../.. -lgfortran -lm -lquadmath checking how to get verbose linking output from x86_64-pc-linux-gnu-gcc... -v checking for C libraries of x86_64-pc-linux-gnu-gcc... -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../.. -lgcc_s checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking whether x86_64-pc-linux-gnu-gfortran appends underscores to external names... yes checking whether x86_64-pc-linux-gnu-gfortran appends extra underscores to external names... no checking whether mixed C/Fortran code can be run... yes checking whether x86_64-pc-linux-gnu-gfortran and x86_64-pc-linux-gnu-gcc agree on int and double... yes checking whether x86_64-pc-linux-gnu-gfortran and x86_64-pc-linux-gnu-gcc agree on double complex... yes checking for x86_64-pc-linux-gnu-gfortran option to support OpenMP... -fopenmp checking 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Installation directory: /usr C compiler: x86_64-pc-linux-gnu-gcc -march=native -O2 -pipe Fortran 77 compiler: x86_64-pc-linux-gnu-gfortran -march=native -O2 -pipe Default C++ compiler: x86_64-pc-linux-gnu-g++ -march=native -O2 -pipe C++98 compiler: x86_64-pc-linux-gnu-g++ -std=gnu++98 -march=native -O2 -pipe C++11 compiler: x86_64-pc-linux-gnu-g++ -std=gnu++11 -march=native -O2 -pipe C++14 compiler: x86_64-pc-linux-gnu-g++ -march=native -O2 -pipe C++17 compiler: x86_64-pc-linux-gnu-g++ -std=gnu++17 -march=native -O2 -pipe Fortran 90/95 compiler: x86_64-pc-linux-gnu-gfortran -march=native -O2 -pipe Obj-C compiler: x86_64-pc-linux-gnu-gcc Interfaces supported: X11 External libraries: readline, BLAS(generic), curl Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library Capabilities skipped: Options not enabled: shared BLAS, R profiling, memory profiling Recommended packages: yes configure: WARNING: you cannot build PDF versions of the R manuals configure: WARNING: you cannot build PDF versions of vignettes and help pages configure: WARNING: neither inconsolata.sty nor zi4.sty found: PDF vignettes and package manuals will not be rendered optimally >>> Source configured. >>> Compiling source in /var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1 ... make -j9 AR=x86_64-pc-linux-gnu-ar make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/m4' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/m4' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/tools' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/tools' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/doc' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/doc/html' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/doc/html' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/doc/manual' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/doc/manual' make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/doc' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/etc' make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/etc' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/share' make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/share' make[1]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/scripts' creating src/scripts/R.fe make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/scripts' mkdir -p -- ../../bin make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/scripts' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/scripts' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/include' mkdir -p -- ../../include make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/include/R_ext' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/include' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra/tre' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra/tre' making regcomp.d from regcomp.c making regexec.d from regexec.c making regerror.d from regerror.c making tre-ast.d from tre-ast.c making tre-compile.d from tre-compile.c making tre-match-approx.d from tre-match-approx.c making tre-match-backtrack.d from tre-match-backtrack.c making tre-match-parallel.d from tre-match-parallel.c making tre-mem.d from tre-mem.c making tre-parse.d from tre-parse.c making tre-stack.d from tre-stack.c making xmalloc.d from xmalloc.c make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra/tre' make[4]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra/tre' x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -fvisibility=hidden -c regcomp.c -o regcomp.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -fvisibility=hidden -c regerror.c -o regerror.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -fvisibility=hidden -c regexec.c -o regexec.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -fvisibility=hidden -c tre-ast.c -o tre-ast.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -fvisibility=hidden -c tre-compile.c -o tre-compile.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -fvisibility=hidden -c tre-mem.c -o tre-mem.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -fvisibility=hidden -c tre-parse.c -o tre-parse.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -fvisibility=hidden -c tre-stack.c -o tre-stack.o x86_64-pc-linux-gnu-gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -fvisibility=hidden -c xmalloc.c -o xmalloc.o x86_64-pc-linux-gnu-ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o x86_64-pc-linux-gnu-ranlib libtre.a make[4]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra/tre' make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra/tre' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/extra' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/appl' making integrate.d from integrate.c making interv.d from interv.c making maxcol.d from maxcol.c making optim.d from optim.c making pretty.d from pretty.c making uncmin.d from uncmin.c make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/appl' x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c integrate.c -o integrate.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c interv.c -o interv.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c maxcol.c -o maxcol.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c optim.c -o optim.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pretty.c -o pretty.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c uncmin.c -o uncmin.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dchdc.f -o dchdc.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dpbfa.f -o dpbfa.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dpbsl.f -o dpbsl.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dpoco.f -o dpoco.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dpodi.f -o dpodi.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dpofa.f -o dpofa.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dposl.f -o dposl.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dqrdc.f -o dqrdc.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dqrdc2.f -o dqrdc2.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dqrls.f -o dqrls.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dqrsl.f -o dqrsl.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dqrutl.f -o dqrutl.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dsvdc.f -o dsvdc.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dtrco.f -o dtrco.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c dtrsl.f -o dtrsl.o x86_64-pc-linux-gnu-ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o x86_64-pc-linux-gnu-ranlib libappl.a make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/appl' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/appl' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/nmath' making mlutils.d from mlutils.c making i1mach.d from i1mach.c making d1mach.d from d1mach.c making fmin2.d from fmin2.c making fmax2.d from fmax2.c making sign.d from sign.c making fround.d from fround.c making ftrunc.d from ftrunc.c making fprec.d from fprec.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making expm1.d from expm1.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making punif.d from punif.c making dunif.d from dunif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making rnorm.d from rnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making qbinom.d from qbinom.c making pbinom.d from pbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making wilcox.d from wilcox.c making toms708.d from toms708.c making signrank.d from signrank.c make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/nmath' x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c mlutils.c -o mlutils.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c d1mach.c -o d1mach.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c i1mach.c -o i1mach.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c fmax2.c -o fmax2.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c fmin2.c -o fmin2.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c fprec.c -o fprec.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c fround.c -o fround.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c ftrunc.c -o ftrunc.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c sign.c -o sign.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c fsign.c -o fsign.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c imax2.c -o imax2.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c imin2.c -o imin2.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c chebyshev.c -o chebyshev.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c log1p.c -o log1p.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c expm1.c -o expm1.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c lgammacor.c -o lgammacor.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c gammalims.c -o gammalims.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c stirlerr.c -o stirlerr.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c bd0.c -o bd0.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c gamma.c -o gamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c lgamma.c -o lgamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c gamma_cody.c -o gamma_cody.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c beta.c -o beta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c lbeta.c -o lbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c polygamma.c -o polygamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c cospi.c -o cospi.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c bessel_i.c -o bessel_i.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c bessel_j.c -o bessel_j.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c bessel_k.c -o bessel_k.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c bessel_y.c -o bessel_y.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c choose.c -o choose.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c snorm.c -o snorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c sexp.c -o sexp.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dgamma.c -o dgamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pgamma.c -o pgamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qgamma.c -o qgamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rgamma.c -o rgamma.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dbeta.c -o dbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pbeta.c -o pbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qbeta.c -o qbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rbeta.c -o rbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dunif.c -o dunif.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c punif.c -o punif.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qunif.c -o qunif.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c runif.c -o runif.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dnorm.c -o dnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pnorm.c -o pnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qnorm.c -o qnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rnorm.c -o rnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dlnorm.c -o dlnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c plnorm.c -o plnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qlnorm.c -o qlnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rlnorm.c -o rlnorm.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c df.c -o df.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pf.c -o pf.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qf.c -o qf.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rf.c -o rf.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dnf.c -o dnf.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dt.c -o dt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pt.c -o pt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qt.c -o qt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rt.c -o rt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dnt.c -o dnt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dchisq.c -o dchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pchisq.c -o pchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qchisq.c -o qchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rchisq.c -o rchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rnchisq.c -o rnchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dbinom.c -o dbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pbinom.c -o pbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qbinom.c -o qbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rbinom.c -o rbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rmultinom.c -o rmultinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dcauchy.c -o dcauchy.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pcauchy.c -o pcauchy.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qcauchy.c -o qcauchy.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rcauchy.c -o rcauchy.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dexp.c -o dexp.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pexp.c -o pexp.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qexp.c -o qexp.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rexp.c -o rexp.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dgeom.c -o dgeom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pgeom.c -o pgeom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qgeom.c -o qgeom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rgeom.c -o rgeom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dhyper.c -o dhyper.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c phyper.c -o phyper.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qhyper.c -o qhyper.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rhyper.c -o rhyper.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dnbinom.c -o dnbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pnbinom.c -o pnbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qnbinom.c -o qnbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rnbinom.c -o rnbinom.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dpois.c -o dpois.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c ppois.c -o ppois.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qpois.c -o qpois.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rpois.c -o rpois.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dweibull.c -o dweibull.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pweibull.c -o pweibull.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qweibull.c -o qweibull.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rweibull.c -o rweibull.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dlogis.c -o dlogis.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c plogis.c -o plogis.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qlogis.c -o qlogis.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rlogis.c -o rlogis.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dnchisq.c -o dnchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pnchisq.c -o pnchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qnchisq.c -o qnchisq.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dnbeta.c -o dnbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pnbeta.c -o pnbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qnbeta.c -o qnbeta.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pnf.c -o pnf.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c pnt.c -o pnt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qnf.c -o qnf.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qnt.c -o qnt.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c ptukey.c -o ptukey.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qtukey.c -o qtukey.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c toms708.c -o toms708.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c wilcox.c -o wilcox.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c signrank.c -o signrank.o x86_64-pc-linux-gnu-ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o x86_64-pc-linux-gnu-ranlib libnmath.a make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/nmath' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/nmath' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/unix' config.status: creating src/unix/Makefile making Rembedded.d from Rembedded.c making dynload.d from dynload.c making sys-std.d from sys-std.c making sys-unix.d from sys-unix.c making system.d from system.c making X11.d from X11.c make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/unix' x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c Rembedded.c -o Rembedded.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dynload.c -o dynload.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c system.c -o system.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c sys-unix.c -o sys-unix.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c sys-std.c -o sys-std.o x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c X11.c -o X11.o x86_64-pc-linux-gnu-ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o x86_64-pc-linux-gnu-ranlib libunix.a make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/unix' make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/unix' x86_64-pc-linux-gnu-gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -march=native -O2 -pipe -Wl,-O1 -Wl,--as-needed -DR_HOME='"/usr/lib64/R"' \ -o Rscript ./Rscript.c make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/unix' make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/unix' make[2]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/main' config.status: creating src/main/Makefile making CommandLineArgs.d from CommandLineArgs.c making Renviron.d from Renviron.c making RNG.d from RNG.c making Rdynload.d from Rdynload.c making agrep.d from agrep.c making apply.d from apply.c making arithmetic.d from arithmetic.c making array.d from array.c making attrib.d from attrib.c making bind.d from bind.c making builtin.d from builtin.c making character.d from character.c making colors.d from colors.c making coerce.d from coerce.c making complex.d from complex.c making connections.d from connections.c making context.d from context.c making cum.d from cum.c making dcf.d from dcf.c making datetime.d from datetime.c making debug.d from debug.c making devices.d from devices.c making deparse.d from deparse.c making dotcode.d from dotcode.c making dstruct.d from dstruct.c making dounzip.d from dounzip.c making duplicate.d from duplicate.c making edit.d from edit.c making engine.d from engine.c making envir.d from envir.c making errors.d from errors.c making eval.d from eval.c making format.d from format.c making gevents.d from gevents.c making gram.d from gram.c making gram-ex.d from gram-ex.c making graphics.d from graphics.c making grep.d from grep.c making identical.d from identical.c making inlined.d from inlined.c making inspect.d from inspect.c making internet.d from internet.c making iosupport.d from iosupport.c making lapack.d from lapack.c making list.d from list.c making localecharset.d from localecharset.c making logic.d from logic.c making main.d from main.c making mapply.d from mapply.c making match.d from match.c making memory.d from memory.c making names.d from names.c making options.d from options.c making objects.d from objects.c making paste.d from paste.c making platform.d from platform.c making plot.d from plot.c making plot3d.d from plot3d.c making plotmath.d from plotmath.c making print.d from print.c making printarray.d from printarray.c making printvector.d from printvector.c making printutils.d from printutils.c making qsort.d from qsort.c making radixsort.d from radixsort.c making random.d from random.c making raw.d from raw.c making relop.d from relop.c making registration.d from registration.c making rlocale.d from rlocale.c making saveload.d from saveload.c making scan.d from scan.c making seq.d from seq.c making serialize.d from serialize.c making sort.d from sort.c making source.d from source.c making sprintf.d from sprintf.c making split.d from split.c making startup.d from startup.c making subassign.d from subassign.c making subscript.d from subscript.c making subset.d from subset.c making summary.d from summary.c making sysutils.d from sysutils.c making times.d from times.c making unique.d from unique.c making util.d from util.c making version.d from version.c making g_alab_her.d from g_alab_her.c making g_cntrlify.d from g_cntrlify.c making g_fontdb.d from g_fontdb.c making g_her_glyph.d from g_her_glyph.c making Rmain.d from Rmain.c making alloca.d from alloca.c making mkdtemp.d from mkdtemp.c making strdup.d from strdup.c making strncasecmp.d from strncasecmp.c make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/main' x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c CommandLineArgs.c -o CommandLineArgs.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c Rdynload.c -o Rdynload.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c Renviron.c -o Renviron.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c RNG.c -o RNG.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c agrep.c -o agrep.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c apply.c -o apply.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c arithmetic.c -o arithmetic.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c array.c -o array.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c attrib.c -o attrib.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c bind.c -o bind.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c builtin.c -o builtin.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c character.c -o character.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c coerce.c -o coerce.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c colors.c -o colors.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c complex.c -o complex.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c connections.c -o connections.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c context.c -o context.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c cum.c -o cum.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dcf.c -o dcf.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c datetime.c -o datetime.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c debug.c -o debug.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c deparse.c -o deparse.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c devices.c -o devices.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dotcode.c -o dotcode.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dounzip.c -o dounzip.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c dstruct.c -o dstruct.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c duplicate.c -o duplicate.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c edit.c -o edit.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c engine.c -o engine.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c envir.c -o envir.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c errors.c -o errors.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c eval.c -o eval.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c format.c -o format.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c gevents.c -o gevents.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c gram.c -o gram.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c gram-ex.c -o gram-ex.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c graphics.c -o graphics.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c grep.c -o grep.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c identical.c -o identical.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c inlined.c -o inlined.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c inspect.c -o inspect.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c internet.c -o internet.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c iosupport.c -o iosupport.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c lapack.c -o lapack.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c list.c -o list.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c localecharset.c -o localecharset.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c logic.c -o logic.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c main.c -o main.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c mapply.c -o mapply.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c match.c -o match.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c memory.c -o memory.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c names.c -o names.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c objects.c -o objects.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c options.c -o options.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c paste.c -o paste.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c platform.c -o platform.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c plot.c -o plot.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c plot3d.c -o plot3d.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c plotmath.c -o plotmath.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c print.c -o print.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c printarray.c -o printarray.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c printvector.c -o printvector.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c printutils.c -o printutils.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c qsort.c -o qsort.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c radixsort.c -o radixsort.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c random.c -o random.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c raw.c -o raw.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c registration.c -o registration.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c relop.c -o relop.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c rlocale.c -o rlocale.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c saveload.c -o saveload.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c scan.c -o scan.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c seq.c -o seq.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c serialize.c -o serialize.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c sort.c -o sort.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c source.c -o source.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c split.c -o split.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c sprintf.c -o sprintf.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c startup.c -o startup.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c subassign.c -o subassign.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c subscript.c -o subscript.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c subset.c -o subset.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c summary.c -o summary.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c sysutils.c -o sysutils.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c times.c -o times.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c unique.c -o unique.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c util.c -o util.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c version.c -o version.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c g_alab_her.c -o g_alab_her.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c g_cntrlify.c -o g_cntrlify.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c g_fontdb.c -o g_fontdb.o x86_64-pc-linux-gnu-gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -march=native -O2 -pipe -c g_her_glyph.c -o g_her_glyph.o x86_64-pc-linux-gnu-gfortran -fopenmp -fpic -march=native -O2 -pipe -c xxxpr.f -o xxxpr.o In file included from /usr/include/string.h:519, from ../../src/include/Rinlinedfuns.h:73, from ../../src/include/Rinternals.h:1357, from ../../src/include/Defn.h:81, from eval.c:27: In function ‘strncpy’, inlined from ‘inflateAssignmentCall’ at eval.c:5787:5, inlined from ‘R_getBCInterpreterExpression’ at eval.c:5840:8: /usr/include/bits/string_fortified.h:91:10: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 91 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ eval.c: In function ‘R_getBCInterpreterExpression’: eval.c:5782:19: note: length computed here 5782 | size_t slen = strlen(name); | ^~~~~~~~~~~~ x86_64-pc-linux-gnu-gcc -shared -fopenmp -Wl,-O1 -Wl,--as-needed -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a -lblas -lgfortran -lm -lquadmath -lreadline -lpcre -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: Rdynload.o:(.bss+0x40): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: Renviron.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: RNG.o:(.bss+0x10): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: agrep.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: apply.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: arithmetic.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: array.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: attrib.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: bind.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: builtin.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: character.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: coerce.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: colors.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: complex.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: connections.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: context.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: cum.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: dcf.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: datetime.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: debug.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: deparse.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: devices.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: dotcode.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: dounzip.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: dstruct.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: duplicate.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: edit.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: engine.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: envir.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: errors.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: eval.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: format.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: gevents.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: gram.o:(.bss+0x54): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: gram-ex.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: graphics.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: grep.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: identical.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: inlined.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: inspect.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: internet.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: iosupport.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: lapack.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: list.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: logic.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: main.o:(.bss+0x58): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: mapply.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: match.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: memory.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: names.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: objects.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: options.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: paste.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: platform.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: plot.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: plot3d.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: plotmath.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: print.o:(.bss+0x40): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: printarray.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: printvector.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: printutils.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: qsort.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: radixsort.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: random.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: raw.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: registration.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: relop.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: saveload.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: scan.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: seq.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: serialize.o:(.bss+0x8): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: sort.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: source.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: split.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: sprintf.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: startup.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: subassign.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: subscript.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: subset.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: summary.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: sysutils.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: times.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: unique.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: util.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: version.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: g_alab_her.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: g_cntrlify.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: g_fontdb.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: g_her_glyph.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../appl/optim.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/Rembedded.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/X11.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/dynload.o:(.bss+0x0): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/sys-std.o:(.bss+0x8): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/sys-unix.o:(.bss+0x8): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/system.o:(.bss+0x20): multiple definition of `ptr_R_ProcessEvents'; ../unix/sys-unix.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ../unix/system.o:(.bss+0xc8): multiple definition of `R_OutputCon'; CommandLineArgs.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: connections.o: warning: relocation against `R_OutputCon' in read-only section `.text' /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: connections.o: relocation R_X86_64_PC32 against symbol `R_OutputCon' can not be used when making a shared object; recompile with -fPIC /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: final link failed: bad value collect2: error: ld returned 1 exit status make[3]: *** [Makefile:177: libR.so] Error 1 make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/main' make[2]: *** [Makefile:135: R] Error 2 make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src/main' make[1]: *** [Makefile:28: R] Error 1 make[1]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/src' make: *** [Makefile:61: R] Error 1 * ERROR: dev-lang/R-3.4.1::gentoo failed (compile phase): * emake failed * * If you need support, post the output of `emerge --info '=dev-lang/R-3.4.1::gentoo'`, * the complete build log and the output of `emerge -pqv '=dev-lang/R-3.4.1::gentoo'`. * The complete build log is located at '/var/tmp/portage/dev-lang/R-3.4.1/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/dev-lang/R-3.4.1/temp/environment'. * Working directory: '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1' * S: '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1'