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Gentoo's Bugzilla – Attachment 577882 Details for
Bug 686860
sci-chemistry/namd-2.10 fails to build
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build.log
1.log (text/plain), 190.84 KB, created by
Pacho Ramos
on 2019-05-27 15:23:20 UTC
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hide
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Description:
build.log
Filename:
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Creator:
Pacho Ramos
Created:
2019-05-27 15:23:20 UTC
Size:
190.84 KB
patch
obsolete
>[32;01m * [39;49;00mPackage: sci-chemistry/namd-2.10 >[32;01m * [39;49;00mRepository: gentoo >[32;01m * [39;49;00mMaintainer: nicolasbock@gentoo.org sci-chemistry@gentoo.org >[32;01m * [39;49;00mUSE: abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU >[32;01m * [39;49;00mFEATURES: ccache network-sandbox preserve-libs sandbox userpriv usersandbox >>>> Unpacking source... >>>> Unpacking NAMD_2.10_Source.tar.gz to /var/tmp/portage/sci-chemistry/namd-2.10/work >>>> Source unpacked in /var/tmp/portage/sci-chemistry/namd-2.10/work >>>> Preparing source in /var/tmp/portage/sci-chemistry/namd-2.10/work/NAMD_2.10_Source ... > [32;01m*[0m Applying namd-2.10-gentoo.patch ... >[A[203C [34;01m[ [32;01mok[34;01m ][0m > [32;01m*[0m Applying namd-2.7-iml-dec.patch ... >[A[203C [34;01m[ [32;01mok[34;01m ][0m >>>> Source prepared. >>>> Configuring source in /var/tmp/portage/sci-chemistry/namd-2.10/work/NAMD_2.10_Source ... > >Selected arch file arch/Linux-x86_64-g++.arch contains: > >NAMD_ARCH = Linux-x86_64 >CHARMARCH = multicore-linux64 > >CXX = x86_64-pc-linux-gnu-g++ >CXXOPTS = -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed >CC = x86_64-pc-linux-gnu-gcc >COPTS = -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed > >Creating directory: Linux-x86_64-g++ >Creating link: .. to .rootdir >Writing build options to Linux-x86_64-g++/Make.config >Using Charm++ build found in Make.charm: /usr/bin/charm-6.8.2 >Warning: No such directory /usr/bin/charm-6.8.2/. >Linking Makefile >Linking Make.depends >Linking src directory >Linking plugins directory >Linking psfgen directory > >Generated Linux-x86_64-g++/Make.config contains the following: > >include .rootdir/Make.charm >include .rootdir/arch/Linux-x86_64-g++.arch >CHARMARCH = . >CHARM = $(CHARMBASE)/$(CHARMARCH) >NAMD_PLATFORM = $(NAMD_ARCH) >include .rootdir/arch/$(NAMD_ARCH).base >include .rootdir/arch/$(NAMD_ARCH).tcl >include .rootdir/arch/$(NAMD_ARCH).fftw3 > >You are ready to run make in directory Linux-x86_64-g++ now. >>>> Source configured. >>>> Compiling source in /var/tmp/portage/sci-chemistry/namd-2.10/work/NAMD_2.10_Source ... >make -j1 >if [ ! -d inc ]; then mkdir -p inc; fi >if [ ! -f inc/.exists ]; then touch inc/.exists; fi >if [ ! -d obj ]; then mkdir -p obj; fi >if [ ! -f obj/.exists ]; then touch obj/.exists; fi >cp src/Node.ci inc >/usr/bin/charmc inc/Node.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/Node.ci >mv Node.def.h inc >mv Node.decl.h inc >cp src/PatchMgr.ci inc >/usr/bin/charmc inc/PatchMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/PatchMgr.ci >mv PatchMgr.def.h inc >mv PatchMgr.decl.h inc >cp src/ComputeMoaMgr.ci inc >/usr/bin/charmc inc/ComputeMoaMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/ComputeMoaMgr.ci >mv ComputeMoaMgr.def.h inc >mv ComputeMoaMgr.decl.h inc >cp src/ComputeMgr.ci inc >/usr/bin/charmc inc/ComputeMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/ComputeMgr.ci >mv ComputeMgr.def.h inc >mv ComputeMgr.decl.h inc >cp src/WorkDistrib.ci inc >/usr/bin/charmc inc/WorkDistrib.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/WorkDistrib.ci >mv WorkDistrib.def.h inc >mv WorkDistrib.decl.h inc >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeMoa.o -c src/ComputeMoa.C >cp src/ComputeMsmMgr.ci inc >/usr/bin/charmc inc/ComputeMsmMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/ComputeMsmMgr.ci >mv ComputeMsmMgr.def.h inc >mv ComputeMsmMgr.decl.h inc >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeMsm.o -c src/ComputeMsm.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeMsmMsa.o -c src/ComputeMsmMsa.C >cp src/ComputeMsmSerialMgr.ci inc >/usr/bin/charmc inc/ComputeMsmSerialMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/ComputeMsmSerialMgr.ci >mv ComputeMsmSerialMgr.def.h inc >mv ComputeMsmSerialMgr.decl.h inc >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeMsmSerial.o -c src/ComputeMsmSerial.C >cp src/ComputeFmmSerialMgr.ci inc >/usr/bin/charmc inc/ComputeFmmSerialMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/ComputeFmmSerialMgr.ci >mv ComputeFmmSerialMgr.def.h inc >mv ComputeFmmSerialMgr.decl.h inc >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeFmmSerial.o -c src/ComputeFmmSerial.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/msm.o -c src/msm.c >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/msm_longrng.o -c src/msm_longrng.c >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/msm_longrng_sprec.o -c src/msm_longrng_sprec.c >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/msm_setup.o -c src/msm_setup.c >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/msm_shortrng.o -c src/msm_shortrng.c >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/msm_shortrng_sprec.o -c src/msm_shortrng_sprec.c >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/wkfutils.o -c src/wkfutils.c >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/common.o -c src/common.C >src/common.C: In function âvoid NAMD_err(const char*)â: >src/common.C:100:39: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if ( ! sys_err_msg ) sys_err_msg = "(unknown error)"; > ^~~~~~~~~~~~~~~~~ >src/common.C: In function âint NAMD_file_exists(const char*)â: >src/common.C:137:40: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if ( ! sys_err_msg ) sys_err_msg = "(unknown error)"; > ^~~~~~~~~~~~~~~~~ >src/common.C: In function âvoid NAMD_backup_file(const char*, const char*)â: >src/common.C:166:42: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if ( ! sys_err_msg ) sys_err_msg = "(unknown error)"; > ^~~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/dcdlib.o -c src/dcdlib.C >src/dcdlib.C: In function âoff_t NAMD_seek(int, off_t, int)â: >src/dcdlib.C:49:18: warning: format â%lldâ expects argument of type âlong long intâ, but argument 3 has type âoff_tâ {aka âlong intâ} [-Wformat=] > sprintf(buf, "seek failed while writing DCD file: SEEK_SET %lld returned %lld\n", offset, retval); > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ >src/dcdlib.C:49:18: warning: format â%lldâ expects argument of type âlong long intâ, but argument 4 has type âoff_tâ {aka âlong intâ} [-Wformat=] >src/dcdlib.C: In function âint write_dcdstep(int, int, float*, float*, float*, double*)â: >src/dcdlib.C:756:6: warning: ignoring return value of âssize_t read(int, void*, size_t)â, declared with attribute warn_unused_result [-Wunused-result] > READ(fd,(void*) &NSAVC,sizeof(int32)); > ^ >src/dcdlib.C:758:6: warning: ignoring return value of âssize_t read(int, void*, size_t)â, declared with attribute warn_unused_result [-Wunused-result] > READ(fd,(void*) &NSTEP,sizeof(int32)); > ^ >src/dcdlib.C:760:6: warning: ignoring return value of âssize_t read(int, void*, size_t)â, declared with attribute warn_unused_result [-Wunused-result] > READ(fd,(void*) &NFILE,sizeof(int32)); > ^ >src/dcdlib.C: In function âint update_dcdstep_par_header(int)â: >src/dcdlib.C:827:6: warning: ignoring return value of âssize_t read(int, void*, size_t)â, declared with attribute warn_unused_result [-Wunused-result] > READ(fd,(void*) &NSAVC,sizeof(int32)); > ^ >src/dcdlib.C:829:6: warning: ignoring return value of âssize_t read(int, void*, size_t)â, declared with attribute warn_unused_result [-Wunused-result] > READ(fd,(void*) &NSTEP,sizeof(int32)); > ^ >src/dcdlib.C:831:6: warning: ignoring return value of âssize_t read(int, void*, size_t)â, declared with attribute warn_unused_result [-Wunused-result] > READ(fd,(void*) &NFILE,sizeof(int32)); > ^ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/erf.o -c src/erf.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/fitrms.o -c src/fitrms.C >cp src/main.ci inc >/usr/bin/charmc inc/main.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >Charmxi> 4: Deprecation warning: mainchare constructors should explicitly take CkArgMsg* if that's how they're implemented. >rm -f inc/main.ci >mv main.def.h inc >mv main.decl.h inc >cp src/ReductionMgr.ci inc >/usr/bin/charmc inc/ReductionMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/ReductionMgr.ci >mv ReductionMgr.def.h inc >mv ReductionMgr.decl.h inc >cp src/ProxyMgr.ci inc >/usr/bin/charmc inc/ProxyMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/ProxyMgr.ci >mv ProxyMgr.def.h inc >mv ProxyMgr.decl.h inc >cp src/LdbCoordinator.ci inc >/usr/bin/charmc inc/LdbCoordinator.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/LdbCoordinator.ci >mv LdbCoordinator.def.h inc >mv LdbCoordinator.decl.h inc >cp src/NamdCentLB.ci inc >/usr/bin/charmc inc/NamdCentLB.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/NamdCentLB.ci >mv NamdCentLB.def.h inc >mv NamdCentLB.decl.h inc >cp src/NamdNborLB.ci inc >/usr/bin/charmc inc/NamdNborLB.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/NamdNborLB.ci >mv NamdNborLB.def.h inc >mv NamdNborLB.decl.h inc >cp src/NamdHybridLB.ci inc >/usr/bin/charmc inc/NamdHybridLB.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/NamdHybridLB.ci >mv NamdHybridLB.def.h inc >mv NamdHybridLB.decl.h inc >cp src/NamdDummyLB.ci inc >/usr/bin/charmc inc/NamdDummyLB.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/NamdDummyLB.ci >mv NamdDummyLB.def.h inc >mv NamdDummyLB.decl.h inc >cp src/ComputePmeMgr.ci inc >/usr/bin/charmc inc/ComputePmeMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/ComputePmeMgr.ci >mv ComputePmeMgr.def.h inc >mv ComputePmeMgr.decl.h inc >cp src/OptPme.ci inc >/usr/bin/charmc inc/OptPme.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/OptPme.ci >mv OptPmeMgr.def.h inc >mv OptPmeMgr.decl.h inc >cp src/fftlib.ci inc >/usr/bin/charmc inc/fftlib.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/fftlib.ci >mv PmeFFTLib.def.h inc >mv PmeFFTLib.decl.h inc >cp src/ComputeExtMgr.ci inc >/usr/bin/charmc inc/ComputeExtMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/ComputeExtMgr.ci >mv ComputeExtMgr.def.h inc >mv ComputeExtMgr.decl.h inc >cp src/ComputeGBISserMgr.ci inc >/usr/bin/charmc inc/ComputeGBISserMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/ComputeGBISserMgr.ci >mv ComputeGBISserMgr.def.h inc >mv ComputeGBISserMgr.decl.h inc >cp src/CollectionMgr.ci inc >/usr/bin/charmc inc/CollectionMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/CollectionMgr.ci >mv CollectionMgr.def.h inc >mv CollectionMgr.decl.h inc >cp src/CollectionMaster.ci inc >/usr/bin/charmc inc/CollectionMaster.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/CollectionMaster.ci >mv CollectionMaster.def.h inc >mv CollectionMaster.decl.h inc >cp src/BroadcastMgr.ci inc >/usr/bin/charmc inc/BroadcastMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/BroadcastMgr.ci >mv BroadcastMgr.def.h inc >mv BroadcastMgr.decl.h inc >cp src/Sync.ci inc >/usr/bin/charmc inc/Sync.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/Sync.ci >mv Sync.def.h inc >mv Sync.decl.h inc >cp src/ParallelIOMgr.ci inc >/usr/bin/charmc inc/ParallelIOMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/ParallelIOMgr.ci >mv ParallelIOMgr.def.h inc >mv ParallelIOMgr.decl.h inc >cp src/DataExchanger.ci inc >/usr/bin/charmc inc/DataExchanger.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/DataExchanger.ci >mv DataExchanger.def.h inc >mv DataExchanger.decl.h inc >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/main.o -c src/main.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/mainfunc.o -c src/mainfunc.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/memusage.o -c src/memusage.C >src/memusage.C: In function âlong unsigned int memusage_proc_self_stat()â: >src/memusage.C:138:36: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > for ( int i=0; i<22; ++i ) fscanf(f,"%*s"); > ~~~~~~^~~~~~~~~ >src/memusage.C:144:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(f,"%lu",&vsz); > ~~~~~~^~~~~~~~~~~~~~ >src/memusage.C: In function âlong unsigned int memusage_ps()â: >src/memusage.C:97:11: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(p, "%ld", &vsz); > ~~~~~~^~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/strlib.o -c src/strlib.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/AlgSeven.o -c src/AlgSeven.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/AlgRecBisection.o -c src/AlgRecBisection.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/AlgNbor.o -c src/AlgNbor.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/AtomMap.o -c src/AtomMap.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/BackEnd.o -c src/BackEnd.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/BroadcastMgr.o -c src/BroadcastMgr.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/BroadcastClient.o -c src/BroadcastClient.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/CollectionMaster.o -c src/CollectionMaster.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/CollectionMgr.o -c src/CollectionMgr.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Communicate.o -c src/Communicate.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Compute.o -c src/Compute.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeAngles.o -c src/ComputeAngles.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeAniso.o -c src/ComputeAniso.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeBonds.o -c src/ComputeBonds.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeConsForce.o -c src/ComputeConsForce.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeConsForceMsgs.o -c src/ComputeConsForceMsgs.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeCrossterms.o -c src/ComputeCrossterms.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeCylindricalBC.o -c src/ComputeCylindricalBC.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeDihedrals.o -c src/ComputeDihedrals.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeDPME.o -c src/ComputeDPME.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeDPMEMsgs.o -c src/ComputeDPMEMsgs.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeDPMTA.o -c src/ComputeDPMTA.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeEField.o -c src/ComputeEField.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeEwald.o -c src/ComputeEwald.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeExt.o -c src/ComputeExt.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeGBISser.o -c src/ComputeGBISser.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeGBIS.o -c src/ComputeGBIS.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeGromacsPair.o -c src/ComputeGromacsPair.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeLCPO.o -c src/ComputeLCPO.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeFullDirect.o -c src/ComputeFullDirect.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeHomePatch.o -c src/ComputeHomePatch.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeHomePatches.o -c src/ComputeHomePatches.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeImpropers.o -c src/ComputeImpropers.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeGlobal.o -c src/ComputeGlobal.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeGlobalMsgs.o -c src/ComputeGlobalMsgs.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeGridForce.o -c src/ComputeGridForce.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeMap.o -c src/ComputeMap.C >src/ComputeMap.C: In member function âvoid ComputeMap::printComputeMap()â: >src/ComputeMap.C:232:9: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > fname = "computeMap.orig"; > ^~~~~~~~~~~~~~~~~ >src/ComputeMap.C: In member function âvoid ComputeMap::loadComputeMap(const char*)â: >src/ComputeMap.C:283:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(fp, "%d\n", &n); > ~~~~~~^~~~~~~~~~~~~~~~ >src/ComputeMap.C:287:11: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(fp, "%d\n", &computeData[i].node); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeMgr.o -c src/ComputeMgr.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedSelf.o -c src/ComputeNonbondedSelf.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedPair.o -c src/ComputeNonbondedPair.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedUtil.o -c src/ComputeNonbondedUtil.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedStd.o -c src/ComputeNonbondedStd.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedFEP.o -c src/ComputeNonbondedFEP.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedGo.o -c src/ComputeNonbondedGo.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedTI.o -c src/ComputeNonbondedTI.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedLES.o -c src/ComputeNonbondedLES.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedPProf.o -c src/ComputeNonbondedPProf.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedTabEnergies.o -c src/ComputeNonbondedTabEnergies.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedCUDA.o -c src/ComputeNonbondedCUDA.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedCUDAExcl.o -c src/ComputeNonbondedCUDAExcl.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedMIC.o -c src/ComputeNonbondedMIC.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeNonbondedMICKernel.o -c src/ComputeNonbondedMICKernel.C >In file included from src/ComputeNonbondedMICKernelBase2.h:218, > from src/ComputeNonbondedMICKernelBase.h:1555, > from src/ComputeNonbondedMICKernel.C:2645: >src/ComputeNonbondedMICKernelBase2_handcode_single.h:1502:86: warning: backslash and newline separated by space > pExt_1[tmpJ32[idx]].excl_index, indexDiff, maxDiff, offset, flags \ > >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputePatch.o -c src/ComputePatch.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputePatchPair.o -c src/ComputePatchPair.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputePme.o -c src/ComputePme.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/OptPme.o -c src/OptPme.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/OptPmeRealSpace.o -c src/OptPmeRealSpace.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeRestraints.o -c src/ComputeRestraints.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeSphericalBC.o -c src/ComputeSphericalBC.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeStir.o -c src/ComputeStir.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeTclBC.o -c src/ComputeTclBC.C >src/ComputeTclBC.C: In static member function âstatic int ComputeTclBC::Tcl_wrapmode(ClientData, Tcl_Interp*, int, char**)â: >src/ComputeTclBC.C:145:21: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > TCL_VOLATILE); > ^ >src/ComputeTclBC.C:156:21: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > TCL_VOLATILE); > ^ >src/ComputeTclBC.C: In static member function âstatic int ComputeTclBC::Tcl_cleardrops(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/ComputeTclBC.C:166:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ComputeTclBC.C: In static member function âstatic int ComputeTclBC::Tcl_dropatom(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/ComputeTclBC.C:179:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ComputeTclBC.C:184:58: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"no atom available",TCL_VOLATILE); > ^ >src/ComputeTclBC.C: In static member function âstatic int ComputeTclBC::Tcl_nextatom(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/ComputeTclBC.C:196:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ComputeTclBC.C: In static member function âstatic int ComputeTclBC::Tcl_getcoord(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/ComputeTclBC.C:236:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ComputeTclBC.C:241:58: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"no atom available",TCL_VOLATILE); > ^ >src/ComputeTclBC.C: In static member function âstatic int ComputeTclBC::Tcl_getcell(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/ComputeTclBC.C:272:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ComputeTclBC.C: In static member function âstatic int ComputeTclBC::Tcl_getmass(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/ComputeTclBC.C:315:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ComputeTclBC.C:320:58: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"no atom available",TCL_VOLATILE); > ^ >src/ComputeTclBC.C: In static member function âstatic int ComputeTclBC::Tcl_getcharge(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/ComputeTclBC.C:332:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ComputeTclBC.C:337:58: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"no atom available",TCL_VOLATILE); > ^ >src/ComputeTclBC.C: In static member function âstatic int ComputeTclBC::Tcl_getid(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/ComputeTclBC.C:349:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ComputeTclBC.C:354:58: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"no atom available",TCL_VOLATILE); > ^ >src/ComputeTclBC.C: In static member function âstatic int ComputeTclBC::Tcl_addforce(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/ComputeTclBC.C:366:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ComputeTclBC.C:378:59: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"force not a vector",TCL_VOLATILE); > ^ >src/ComputeTclBC.C:384:58: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"no atom available",TCL_VOLATILE); > ^ >src/ComputeTclBC.C: In static member function âstatic int ComputeTclBC::Tcl_addenergy(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/ComputeTclBC.C:398:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ComputeTclBC.C:404:60: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"energy not a number",TCL_VOLATILE); > ^ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ComputeThole.o -c src/ComputeThole.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ConfigList.o -c src/ConfigList.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Controller.o -c src/Controller.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ccsinterface.o -c src/ccsinterface.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/DataStream.o -c src/DataStream.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/DumpBench.o -c src/DumpBench.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/FreeEnergyAssert.o -c src/FreeEnergyAssert.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/FreeEnergyGroup.o -c src/FreeEnergyGroup.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/FreeEnergyLambda.o -c src/FreeEnergyLambda.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/FreeEnergyLambdMgr.o -c src/FreeEnergyLambdMgr.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/FreeEnergyParse.o -c src/FreeEnergyParse.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/FreeEnergyRestrain.o -c src/FreeEnergyRestrain.C >src/FreeEnergyRestrain.C: In member function âvoid ARestraint::DistributeForce(int, AVector, GlobalMasterFreeEnergy&)â: >src/FreeEnergyRestrain.C:205:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (Mass < 0) {EarlyExit("Negative Mass", AtomID);}; > ^ >src/FreeEnergyRestrain.C:213:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (Mass < 0) {EarlyExit("Negative Mass", AtomID);} > ^ >src/FreeEnergyRestrain.C:218:57: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (RetVal < 0) {EarlyExit("Can't add Force", AtomID);} > ^ >src/FreeEnergyRestrain.C: In member function âvoid ARestraint::UpdateCOMs(GlobalMasterFreeEnergy&)â: >src/FreeEnergyRestrain.C:247:62: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (RetVal < 0) {EarlyExit("Can't get Position", AtomID);} > ^ >src/FreeEnergyRestrain.C:251:55: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (Mass < 0) {EarlyExit("Negative Mass", AtomID);} > ^ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/FreeEnergyRMgr.o -c src/FreeEnergyRMgr.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/FreeEnergyVector.o -c src/FreeEnergyVector.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/fstream_namd.o -c src/fstream_namd.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GlobalMaster.o -c src/GlobalMaster.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GlobalMasterServer.o -c src/GlobalMasterServer.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GlobalMasterTest.o -c src/GlobalMasterTest.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GlobalMasterIMD.o -c src/GlobalMasterIMD.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GlobalMasterTcl.o -c src/GlobalMasterTcl.C >src/GlobalMasterTcl.C: In static member function âstatic int GlobalMasterTcl::Tcl_atomid(ClientData, Tcl_Interp*, int, char**)â: >src/GlobalMasterTcl.C:44:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C:58:55: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"atom not found",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C: In static member function âstatic int GlobalMasterTcl::Tcl_addatom(ClientData, Tcl_Interp*, int, char**)â: >src/GlobalMasterTcl.C:74:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C: In static member function âstatic int GlobalMasterTcl::Tcl_addgroup(ClientData, Tcl_Interp*, int, char**)â: >src/GlobalMasterTcl.C:100:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C: In static member function âstatic int GlobalMasterTcl::Tcl_reconfig(ClientData, Tcl_Interp*, int, char**)â: >src/GlobalMasterTcl.C:150:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C: In static member function âstatic int GlobalMasterTcl::Tcl_clearconfig(ClientData, Tcl_Interp*, int, char**)â: >src/GlobalMasterTcl.C:163:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C: In static member function âstatic int GlobalMasterTcl::Tcl_getstep(ClientData, Tcl_Interp*, int, char**)â: >src/GlobalMasterTcl.C:179:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C: In static member function âstatic int GlobalMasterTcl::Tcl_loadforces(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/GlobalMasterTcl.C:193:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C: In static member function âstatic int GlobalMasterTcl::Tcl_loadtotalforces(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/GlobalMasterTcl.C:265:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C: In static member function âstatic int GlobalMasterTcl::Tcl_loadcoords(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/GlobalMasterTcl.C:307:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C: In static member function âstatic int GlobalMasterTcl::Tcl_loadmasses(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/GlobalMasterTcl.C:365:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C: In static member function âstatic int GlobalMasterTcl::Tcl_addforce(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/GlobalMasterTcl.C:410:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C:429:59: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"force not a vector",TCL_VOLATILE); > ^ >src/GlobalMasterTcl.C:437:72: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"requested group not available",TCL_VOLATILE); > ^ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GlobalMasterSMD.o -c src/GlobalMasterSMD.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GlobalMasterTMD.o -c src/GlobalMasterTMD.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Matrix4Symmetry.o -c src/Matrix4Symmetry.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GlobalMasterSymmetry.o -c src/GlobalMasterSymmetry.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GlobalMasterFreeEnergy.o -c src/GlobalMasterFreeEnergy.C >src/GlobalMasterFreeEnergy.C: In member function âvoid GlobalMasterFreeEnergy::initialize()â: >src/GlobalMasterFreeEnergy.C:241:12: warning: ignoring return value of âsize_t fread(void*, size_t, size_t, FILE*)â, declared with attribute warn_unused_result [-Wunused-result] > fread(new_config,sizeof(char),add_len,infile); > ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GlobalMasterEasy.o -c src/GlobalMasterEasy.C >src/GlobalMasterEasy.C: In member function âvoid GlobalMasterEasy::initialize()â: >src/GlobalMasterEasy.C:146:12: warning: ignoring return value of âsize_t fread(void*, size_t, size_t, FILE*)â, declared with attribute warn_unused_result [-Wunused-result] > fread(new_config,sizeof(char),add_len,infile); > ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GlobalMasterMisc.o -c src/GlobalMasterMisc.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvar.o -c src/colvar.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvaratoms.o -c src/colvaratoms.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarbias.o -c src/colvarbias.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarbias_abf.o -c src/colvarbias_abf.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarbias_alb.o -c src/colvarbias_alb.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarbias_meta.o -c src/colvarbias_meta.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarbias_restraint.o -c src/colvarbias_restraint.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarcomp.o -c src/colvarcomp.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarcomp_angles.o -c src/colvarcomp_angles.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarcomp_coordnums.o -c src/colvarcomp_coordnums.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarcomp_distances.o -c src/colvarcomp_distances.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarcomp_protein.o -c src/colvarcomp_protein.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarcomp_rotations.o -c src/colvarcomp_rotations.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvargrid.o -c src/colvargrid.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarmodule.o -c src/colvarmodule.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarparse.o -c src/colvarparse.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarproxy_namd.o -c src/colvarproxy_namd.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarscript.o -c src/colvarscript.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvartypes.o -c src/colvartypes.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/colvarvalue.o -c src/colvarvalue.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GridForceGrid.o -c src/GridForceGrid.C >src/GridForceGrid.C: In member function âvoid GridforceFullBaseGrid::readHeader(SimParameters*, MGridforceParams*)â: >src/GridForceGrid.C:275:20: warning: use of assignment suppression and length modifier together in gnu_scanf format [-Wformat=] > fscanf(poten_fp, "object %*d class gridconnections counts %*lf %*lf %*lf\n"); > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:275:20: warning: use of assignment suppression and length modifier together in gnu_scanf format [-Wformat=] >src/GridForceGrid.C:275:20: warning: use of assignment suppression and length modifier together in gnu_scanf format [-Wformat=] >src/GridForceGrid.C:252:12: warning: ignoring return value of âchar* fgets(char*, int, FILE*)â, declared with attribute warn_unused_result [-Wunused-result] > fgets(line, 256, poten_fp); // Read comment lines > ~~~~~^~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:258:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "object %*d class gridpositions counts %d %d %d\n", > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &k_nopad[0], &k_nopad[1], &k_nopad[2]); > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:263:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "origin %lf %lf %lf\n", > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &origin.x, &origin.y, &origin.z); > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:268:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "delta %lf %lf %lf\n", &e.xx, &e.yx, &e.zx); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:269:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "delta %lf %lf %lf\n", &e.xy, &e.yy, &e.zy); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:270:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "delta %lf %lf %lf\n", &e.xz, &e.yz, &e.zz); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:275:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "object %*d class gridconnections counts %*lf %*lf %*lf\n"); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:276:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "object %*d class array type double rank 0 items %*d data follows\n"); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C: In member function âvoid GridforceFullMainGrid::initialize(char*, SimParameters*, MGridforceParams*, int)â: >src/GridForceGrid.C:443:7: warning: ignoring return value of âchar* fgets(char*, int, FILE*)â, declared with attribute warn_unused_result [-Wunused-result] > fgets(line, 256, poten_fp); // Read comment lines > ~~~~~^~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:452:8: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "# namdnugrid maingrid subgrids count %d\n", &numSubgrids); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:480:11: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "\n"); > ~~~~~~^~~~~~~~~~~~~~~~ >src/GridForceGrid.C: In member function âvoid GridforceFullSubGrid::initialize(SimParameters*, MGridforceParams*)â: >src/GridForceGrid.C:913:8: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "%s", str); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:914:7: warning: ignoring return value of âchar* fgets(char*, int, FILE*)â, declared with attribute warn_unused_result [-Wunused-result] > fgets(line, 256, poten_fp); > ~~~~~^~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:921:11: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "object"); > ~~~~~~^~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:936:8: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "%s", str); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:937:7: warning: ignoring return value of âchar* fgets(char*, int, FILE*)â, declared with attribute warn_unused_result [-Wunused-result] > fgets(line, 256, poten_fp); > ~~~~~^~~~~~~~~~~~~~~~~~~~~ >src/GridForceGrid.C:1066:11: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(poten_fp, "\n"); > ~~~~~~^~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GromacsTopFile.o -c src/GromacsTopFile.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/heap.o -c src/heap.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/HomePatch.o -c src/HomePatch.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/IMDOutput.o -c src/IMDOutput.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/InfoStream.o -c src/InfoStream.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/LdbCoordinator.o -c src/LdbCoordinator.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/LJTable.o -c src/LJTable.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Measure.o -c src/Measure.C >src/Measure.C: In function âint Tcl_loadCoords(ClientData, Tcl_Interp*, int, Tcl_Obj* const*)â: >src/Measure.C:114:65: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"loadCoords: wrong # args",TCL_VOLATILE); > ^ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/MGridforceParams.o -c src/MGridforceParams.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/MStream.o -c src/MStream.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/MigrateAtomsMsg.o -c src/MigrateAtomsMsg.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Molecule.o -c src/Molecule.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Molecule2.o -c src/Molecule2.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/GoMolecule.o -c src/GoMolecule.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/NamdCentLB.o -c src/NamdCentLB.C >src/NamdCentLB.C: In member function âvoid NamdCentLB::loadDataASCII(char*, int&, int&, int&)â: >src/NamdCentLB.C:390:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(fp,"%d %d %d",&numProcessors,&numPatches,&numComputes); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/NamdCentLB.C:404:11: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(fp,"%d %le %le %le", &p->Id, &p->load, &p->backgroundLoad, &p->computeLoad); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/NamdCentLB.C:405:11: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(fp,"%le\n", &p->idleTime); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ >src/NamdCentLB.C:412:11: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(fp,"%d %le %d %d\n",&p->Id,&p->load,&p->processor,&p->numAtoms); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/NamdCentLB.C:419:11: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(fp,"%d %le %d %d %d %d",&c->Id,&c->load,&c->patch1,&c->patch2, > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &c->processor,&c->oldProcessor); > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/NamdCentLB.C:430:13: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(fp,"%d %d: ",&curp, &num); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ >src/NamdCentLB.C:435:17: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(fp,"%d",&id); > ~~~~~~^~~~~~~~~~~~~ >src/NamdCentLB.C:442:13: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(fp,"%d %d: ",&curp, &num); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ >src/NamdCentLB.C:447:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(fp,"%d",&id); > ~~~~~~^~~~~~~~~~~~~ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/NamdNborLB.o -c src/NamdNborLB.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/NamdHybridLB.o -c src/NamdHybridLB.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/NamdDummyLB.o -c src/NamdDummyLB.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/NamdState.o -c src/NamdState.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/NamdOneTools.o -c src/NamdOneTools.C >cp src/ComputeGridForceMgr.ci inc >/usr/bin/charmc inc/ComputeGridForceMgr.ci >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >rm -f inc/ComputeGridForceMgr.ci >mv ComputeGridForceMgr.def.h inc >mv ComputeGridForceMgr.decl.h inc >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Node.o -c src/Node.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Output.o -c src/Output.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Parameters.o -c src/Parameters.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ParseOptions.o -c src/ParseOptions.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Patch.o -c src/Patch.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/PatchMgr.o -c src/PatchMgr.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/PatchMap.o -c src/PatchMap.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/PDB.o -c src/PDB.C >src/PDB.C: In constructor âPDB::PDB(const char*, Ambertoppar*)â: >src/PDB.C:561:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(infile,"%d",&atomCount); // Read in num of atoms > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ >src/PDB.C: In constructor âPDB::PDB(const char*, const GromacsTopFile*)â: >src/PDB.C:634:8: warning: ignoring return value of âchar* fgets(char*, int, FILE*)â, declared with attribute warn_unused_result [-Wunused-result] > fgets(buf,LINESIZE-1,infile); // get the title > ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ >src/PDB.C:638:8: warning: ignoring return value of âchar* fgets(char*, int, FILE*)â, declared with attribute warn_unused_result [-Wunused-result] > fgets(buf,LINESIZE-1,infile); // get the number of atoms > ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ >src/PDB.C:679:10: warning: ignoring return value of âchar* fgets(char*, int, FILE*)â, declared with attribute warn_unused_result [-Wunused-result] > fgets(buf,LINESIZE-1,infile); // get a line > ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/PDBData.o -c src/PDBData.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/PmeKSpace.o -c src/PmeKSpace.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/PmeRealSpace.o -c src/PmeRealSpace.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ProcessorPrivate.o -c src/ProcessorPrivate.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ProxyMgr.o -c src/ProxyMgr.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ProxyPatch.o -c src/ProxyPatch.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Rebalancer.o -c src/Rebalancer.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/RecBisection.o -c src/RecBisection.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ReductionMgr.o -c src/ReductionMgr.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/RefineOnly.o -c src/RefineOnly.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/RefineTorusLB.o -c src/RefineTorusLB.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ScriptTcl.o -c src/ScriptTcl.C >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_numPes(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:165:60: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"no arguments needed",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_numNodes(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:174:60: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"no arguments needed",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_numPhysicalNodes(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:183:60: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"no arguments needed",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_numReplicas(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:192:60: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"no arguments needed",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_myReplica(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:201:60: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"no arguments needed",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_replicaSendrecv(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:211:65: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"args: data dest ?source?",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_replicaSend(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:240:56: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"args: data dest",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_replicaRecv(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:253:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"args: source",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_replicaBarrier(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:274:60: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"no arguments needed",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_replicaAtomSendrecv(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:287:95: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"replicaUniformPatchGrids is required for atom exchange",TCL_VOLATILE); > ^ >src/ScriptTcl.C:291:75: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"bad arg count; args: dest ?source?",TCL_VOLATILE); > ^ >src/ScriptTcl.C:296:70: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"bad dest; args: dest ?source?",TCL_VOLATILE); > ^ >src/ScriptTcl.C:302:74: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"bad source; args: dest ?source?",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_replicaAtomSend(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:345:95: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"replicaUniformPatchGrids is required for atom exchange",TCL_VOLATILE); > ^ >src/ScriptTcl.C:349:66: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"bad arg count; args: dest",TCL_VOLATILE); > ^ >src/ScriptTcl.C:354:61: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"bad dest; args: dest",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_replicaAtomRecv(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:382:95: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"replicaUniformPatchGrids is required for atom exchange",TCL_VOLATILE); > ^ >src/ScriptTcl.C:386:70: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"bad arg count; args: ?source?",TCL_VOLATILE); > ^ >src/ScriptTcl.C:392:69: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"bad source; args: ?source?",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_stdout(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:429:55: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp, "wrong # args", TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_config(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:505:66: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"error parsing config file",TCL_VOLATILE); > ^ >src/ScriptTcl.C:520:66: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"error parsing config file",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_isset_config(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:530:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_istrue_config(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:557:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:565:67: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"parameter value is not set",TCL_VOLATILE); > ^ >src/ScriptTcl.C:570:71: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"parameter value is not boolean",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_istrue_param(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:580:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:588:58: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"unknown parameter",TCL_VOLATILE); > ^ >src/ScriptTcl.C:592:65: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"parameter is not boolean",TCL_VOLATILE); > ^ >src/ScriptTcl.C:596:67: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"parameter value is not set",TCL_VOLATILE); > ^ >src/ScriptTcl.C:600:64: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"bug in Tcl_istrue_param",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_isset_param(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:610:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:618:58: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"unknown parameter",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_param(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:628:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:634:64: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"parameter name too long",TCL_VOLATILE); > ^ >src/ScriptTcl.C:646:60: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"unknown parameter",TCL_VOLATILE); > ^ >src/ScriptTcl.C:655:65: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"parameter value too long",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_reinitvels(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:674:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_rescalevels(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:691:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_run(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:708:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"too few args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:712:54: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"too many args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:721:46: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > "first arg not norepeat",TCL_VOLATILE); > ^ >src/ScriptTcl.C:731:77: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"number of steps must be non-negative",TCL_VOLATILE); > ^ >src/ScriptTcl.C:736:90: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"firstTimestep must be a multiple of stepsPerCycle",TCL_VOLATILE); > ^ >src/ScriptTcl.C:740:92: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"number of steps must be a multiple of stepsPerCycle",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_minimize(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:766:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:774:77: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"number of steps must be non-negative",TCL_VOLATILE); > ^ >src/ScriptTcl.C:779:90: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"firstTimestep must be a multiple of stepsPerCycle",TCL_VOLATILE); > ^ >src/ScriptTcl.C:783:92: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"number of steps must be a multiple of stepsPerCycle",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_moveallby(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:808:55: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp, "wrong # args", TCL_VOLATILE); > ^ >src/ScriptTcl.C:820:62: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"argument not a vector",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_move(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:839:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:847:82: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"syntax is 'move <id> to|by {<x> <y> <z>}'",TCL_VOLATILE); > ^ >src/ScriptTcl.C:857:68: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"third argument not a vector",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_output(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:885:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"too few args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:889:54: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"too many args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:894:59: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"file name too long",TCL_VOLATILE); > ^ >src/ScriptTcl.C:907:62: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > "first arg not withforces or onlyforces",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_measure(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:946:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_colvarbias(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:973:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:978:66: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"colvars module not active",TCL_VOLATILE); > ^ >src/ScriptTcl.C:990:82: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"energydiff requires a previous timestep",TCL_VOLATILE); > ^ >src/ScriptTcl.C:1002:69: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"unknown colvarbias operation",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_colvarvalue(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:1015:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:1020:66: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"colvars module not active",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_colvarfreq(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:1066:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C:1071:66: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"colvars module not active",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_colvars(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:1088:66: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"colvars module not active",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_checkpoint(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:1113:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_revert(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:1127:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_callback(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:1140:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >src/ScriptTcl.C: In static member function âstatic int ScriptTcl::Tcl_reinitatoms(ClientData, Tcl_Interp*, int, char**)â: >src/ScriptTcl.C:1174:53: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > Tcl_SetResult(interp,"wrong # args",TCL_VOLATILE); > ^ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Sequencer.o -c src/Sequencer.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Set.o -c src/Set.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Settle.o -c src/Settle.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/SimParameters.o -c src/SimParameters.C >src/SimParameters.C: In member function âvoid SimParameters::print_config(ParseOptions&, ConfigList*, char*&)â: >src/SimParameters.C:5384:36: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case CUBIC: approx_str = "C1 CUBIC"; break; > ^~~~~~~~~~ >src/SimParameters.C:5385:36: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case QUINTIC: approx_str = "C1 QUINTIC"; break; > ^~~~~~~~~~~~ >src/SimParameters.C:5386:36: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case QUINTIC2: approx_str = "C2 QUINTIC"; break; > ^~~~~~~~~~~~ >src/SimParameters.C:5387:36: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case SEPTIC: approx_str = "C1 SEPTIC"; break; > ^~~~~~~~~~~ >src/SimParameters.C:5388:36: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case SEPTIC3: approx_str = "C3 SEPTIC"; break; > ^~~~~~~~~~~ >src/SimParameters.C:5389:36: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case NONIC: approx_str = "C1 NONIC"; break; > ^~~~~~~~~~ >src/SimParameters.C:5390:36: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case NONIC4: approx_str = "C4 NONIC"; break; > ^~~~~~~~~~ >src/SimParameters.C:5391:36: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case C1HERMITE:approx_str = "C1 HERMITE"; break; > ^~~~~~~~~~~~ >src/SimParameters.C:5392:36: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > default: approx_str = "UNKNOWN"; break; > ^~~~~~~~~ >src/SimParameters.C:5395:35: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case TAYLOR2: split_str = "C2 TAYLOR"; break; > ^~~~~~~~~~~ >src/SimParameters.C:5396:35: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case TAYLOR3: split_str = "C3 TAYLOR"; break; > ^~~~~~~~~~~ >src/SimParameters.C:5397:35: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case TAYLOR4: split_str = "C4 TAYLOR"; break; > ^~~~~~~~~~~ >src/SimParameters.C:5398:35: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case TAYLOR5: split_str = "C5 TAYLOR"; break; > ^~~~~~~~~~~ >src/SimParameters.C:5399:35: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case TAYLOR6: split_str = "C6 TAYLOR"; break; > ^~~~~~~~~~~ >src/SimParameters.C:5400:35: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case TAYLOR7: split_str = "C7 TAYLOR"; break; > ^~~~~~~~~~~ >src/SimParameters.C:5401:35: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > case TAYLOR8: split_str = "C8 TAYLOR"; break; > ^~~~~~~~~~~ >src/SimParameters.C:5402:35: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > default: split_str = "UNKNOWN"; break; > ^~~~~~~~~ >In file included from src/SimParameters.h:21, > from src/GridForceGrid.h:14, > from src/Molecule.h:31, > from src/ComputeNonbondedUtil.h:16, > from src/SimParameters.C:21: >src/SimParameters.C: In member function âvoid SimParameters::parse_mgrid_params(ConfigList*)â: >src/MGridforceParams.h:18:37: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > #define MGRIDFORCEPARAMS_DEFAULTKEY "BaseGridForceParams" > ^~~~~~~~~~~~~~~~~~~~~ >src/SimParameters.C:5637:25: note: in expansion of macro âMGRIDFORCEPARAMS_DEFAULTKEYâ > char *default_key = MGRIDFORCEPARAMS_DEFAULTKEY; > ^~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/SimParameters.C: In member function âvoid SimParameters::print_mgrid_params()â: >src/SimParameters.C:6054:22: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > char *qcol_msg = "Use atom charge"; > ^~~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/SortAtoms.o -c src/SortAtoms.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/Sync.o -c src/Sync.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/TclCommands.o -c src/TclCommands.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/TorusLB.o -c src/TorusLB.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/WorkDistrib.o -c src/WorkDistrib.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/pub3dfft.o -c src/pub3dfft.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/vmdsock.o -c src/vmdsock.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/parm.o -c src/parm.C >src/parm.C: In member function âint parm::readparm(char*)â: >src/parm.C:184:27: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"TITLE")) > ^ >src/parm.C:194:31: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"POINTERS")) > ^ >src/parm.C:318:31: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"ATOM_NAME")) > ^ >src/parm.C:332:28: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"CHARGE")) > ^ >src/parm.C:350:26: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"MASS")) > ^ >src/parm.C:368:38: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"ATOM_TYPE_INDEX")) > ^ >src/parm.C:389:44: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"NUMBER_EXCLUDED_ATOMS")) > ^ >src/parm.C:410:43: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"NONBONDED_PARM_INDEX")) > ^ >src/parm.C:431:35: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"RESIDUE_LABEL")) > ^ >src/parm.C:443:38: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"RESIDUE_POINTER")) > ^ >src/parm.C:465:41: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"BOND_FORCE_CONSTANT")) > ^ >src/parm.C:483:38: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"BOND_EQUIL_VALUE")) > ^ >src/parm.C:501:42: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"ANGLE_FORCE_CONSTANT")) > ^ >src/parm.C:519:39: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"ANGLE_EQUIL_VALUE")) > ^ >src/parm.C:537:45: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"DIHEDRAL_FORCE_CONSTANT")) > ^ >src/parm.C:555:42: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"DIHEDRAL_PERIODICITY")) > ^ >src/parm.C:573:36: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"DIHEDRAL_PHASE")) > ^ >src/parm.C:591:27: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"SOLTY")) > ^ >src/parm.C:610:41: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"LENNARD_JONES_ACOEF")) > ^ >src/parm.C:629:41: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"LENNARD_JONES_BCOEF")) > ^ >src/parm.C:650:41: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"BONDS_INC_HYDROGEN")) > ^ >src/parm.C:682:45: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"BONDS_WITHOUT_HYDROGEN")) > ^ >src/parm.C:715:42: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"ANGLES_INC_HYDROGEN")) > ^ >src/parm.C:750:46: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"ANGLES_WITHOUT_HYDROGEN")) > ^ >src/parm.C:786:45: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"DIHEDRALS_INC_HYDROGEN")) > ^ >src/parm.C:823:49: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"DIHEDRALS_WITHOUT_HYDROGEN")) > ^ >src/parm.C:855:42: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"EXCLUDED_ATOMS_LIST")) > ^ >src/parm.C:876:33: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"HBOND_ACOEF")) > ^ >src/parm.C:894:33: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"HBOND_BCOEF")) > ^ >src/parm.C:912:27: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"HBCUT")) > ^ >src/parm.C:933:37: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"AMBER_ATOM_TYPE")) > ^ >src/parm.C:945:47: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"TREE_CHAIN_CLASSIFICATION")) > ^ >src/parm.C:957:33: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"JOIN_ARRAY")) > ^ >src/parm.C:980:29: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"IROTAT")) > ^ >src/parm.C:1009:40: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"SOLVENT_POINTERS")) > ^ >src/parm.C:1034:42: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > { if (!moveto(file,"ATOMS_PER_MOLECULE")) > ^ >src/parm.C:1050:37: warning: ISO C++ forbids converting a string constant to âchar*â [-Wwrite-strings] > if (!moveto(file,"BOX_DIMENSIONS")) > ^ >src/parm.C:199:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, "%d%d%d%d%d%d%d%d%d%d%d%d", > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &Natom, &Ntypes, &Nbonh, &Mbona, > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &Ntheth, &Mtheta, &Nphih, &Mphia, > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &Nhparm, &Nparm, &Nnb, &Nres); > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:205:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, "%d%d%d%d%d%d%d%d%d%d%d%d", > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &Nbona, &Ntheta, &Nphia, &Numbnd, > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &Numang, &Nptra, &Natyp, &Nphb, > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &ifpert, &idum, &idum, &idum); > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:210:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d %d %d %d %d %d", > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &idum, &idum,&idum,&IfBox,&Nmxrs,&IfCap); > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:340:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &Charges[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:358:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %e", &Masses[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:373:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d", &Iac[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:394:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d", &Iblo[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:415:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d", &Cno[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:448:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d", &Ipres[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:473:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &Rk[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~ >src/parm.C:491:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &Req[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:509:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &Tk[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~ >src/parm.C:527:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &Teq[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:545:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &Pk[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~ >src/parm.C:563:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &Pn[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~ >src/parm.C:581:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &Phase[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:599:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &Solty[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:618:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &Cn1[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:637:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &Cn2[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:655:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d %d %d", > ~~~~~~^~~~~~~~~~~~~~~~~~~ > &BondHAt1[i], &BondHAt2[i], &BondHNum[i]); > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:687:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d %d %d", > ~~~~~~^~~~~~~~~~~~~~~~~~~ > &BondAt1[i], &BondAt2[i], &BondNum[i]); > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:720:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d %d %d %d", > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ > &AngleHAt1[i], &AngleHAt2[i], > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &AngleHAt3[i], &AngleHNum[i]); > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:755:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d %d %d %d", > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ > &AngleAt1[i], &AngleAt2[i], > ~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &AngleAt3[i], &AngleNum[i]); > ~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:791:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d %d %d %d %d", > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ > &DihHAt1[i], &DihHAt2[i], &DihHAt3[i], > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &DihHAt4[i], &DihHNum[i]); > ~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:828:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d %d %d %d %d", > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ > &DihAt1[i], &DihAt2[i], &DihAt3[i], > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &DihAt4[i], &DihNum[i]); > ~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:860:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d", &ExclAt[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:884:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &HB12[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:902:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &HB6[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:921:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f", &H[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~ >src/parm.C:962:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d", &TreeJoin[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:985:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d", &AtomRes[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:1013:10: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d %d %d", &Iptres, &Nspm, > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > &Nspsol); > ~~~~~~~~ >src/parm.C:1039:11: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d", &Boundary[i]); > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:1057:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %f %f %f", > ~~~~~~^~~~~~~~~~~~~~~~~~~ > #endif > ~~~~~~ > &Box[0], &Box[1], &Box[2]); > ~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/parm.C:1080:9: warning: ignoring return value of âint fscanf(FILE*, const char*, ...)â, declared with attribute warn_unused_result [-Wunused-result] > fscanf(file, " %d %f %f %f %f", > ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ > #endif > ~~~~~~ > &Natcap, &Cutcap, > ~~~~~~~~~~~~~~~~~ > &Xcap, &Ycap, &Zcap); > ~~~~~~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/imd.o -c src/imd.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/CompressPsf.o -c src/CompressPsf.C >src/CompressPsf.C: In function âvoid outputCompressedFile(FILE*, FILE*)â: >src/CompressPsf.C:642:25: warning: format â%dâ expects argument of type âintâ, but argument 3 has type âstd::vector<int>::size_typeâ {aka âlong unsigned intâ} [-Wformat=] > fprintf(txtOfp, "%d", sig->fullExclOffset.size()); > ^~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/CompressPsf.C:648:25: warning: format â%dâ expects argument of type âintâ, but argument 3 has type âstd::vector<int>::size_typeâ {aka âlong unsigned intâ} [-Wformat=] > fprintf(txtOfp, "%d", sig->modExclOffset.size()); > ^~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/PluginIOMgr.o -c src/PluginIOMgr.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/DataExchanger.o -c src/DataExchanger.C >x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/ParallelIOMgr.o -c src/ParallelIOMgr.C >src/ParallelIOMgr.C: In member function âvoid ParallelIOMgr::readInfoForParOutput()â: >src/ParallelIOMgr.C:418:10: warning: ignoring return value of âsize_t fread(void*, size_t, size_t, FILE*)â, declared with attribute warn_unused_result [-Wunused-result] > fread(&magicNum, sizeof(int), 1, ifp); > ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/ParallelIOMgr.C:437:10: warning: ignoring return value of âsize_t fread(void*, size_t, size_t, FILE*)â, declared with attribute warn_unused_result [-Wunused-result] > fread(isWater, sizeof(char), numMyAtoms, ifp); > ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >src/ParallelIOMgr.C:453:10: warning: ignoring return value of âsize_t fread(void*, size_t, size_t, FILE*)â, declared with attribute warn_unused_result [-Wunused-result] > fread(clusterID, sizeof(int), numMyAtoms, ifp); > ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-gcc -Iplugins/molfile_plugin/src -Iplugins/include -DSTATIC_PLUGIN -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/dcdplugin.o -c -DVMDPLUGIN=molfile_dcdplugin plugins/molfile_plugin/src/dcdplugin.c >x86_64-pc-linux-gnu-gcc -Iplugins/molfile_plugin/src -Iplugins/include -DSTATIC_PLUGIN -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/jsplugin.o -c -DVMDPLUGIN=molfile_jsplugin plugins/molfile_plugin/src/jsplugin.c >x86_64-pc-linux-gnu-gcc -Iplugins/molfile_plugin/src -Iplugins/include -DSTATIC_PLUGIN -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/namdbinplugin.o -c -DVMDPLUGIN=molfile_namdbinplugin plugins/molfile_plugin/src/namdbinplugin.c >plugins/molfile_plugin/src/namdbinplugin.c: In function âopen_namdbin_readâ: >plugins/molfile_plugin/src/namdbinplugin.c:65:3: warning: ignoring return value of âfreadâ, declared with attribute warn_unused_result [-Wunused-result] > fread(&filen, sizeof(namdbin_int32), 1, fd); > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >x86_64-pc-linux-gnu-gcc -Iplugins/molfile_plugin/src -Iplugins/include -DSTATIC_PLUGIN -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/pdbplugin.o -c -DVMDPLUGIN=molfile_pdbplugin plugins/molfile_plugin/src/pdbplugin.c >x86_64-pc-linux-gnu-gcc -Iplugins/molfile_plugin/src -Iplugins/include -DSTATIC_PLUGIN -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/psfplugin.o -c -DVMDPLUGIN=molfile_psfplugin plugins/molfile_plugin/src/psfplugin.c >rm -f obj/buildinfo.C; echo 'const char *namd_build_date = ' \"`date`\"\; > obj/buildinfo.C; echo 'const char *namd_build_user = ' \"\"\; >> obj/buildinfo.C; echo 'const char *namd_build_machine = ' \"`hostname`\"\; >> obj/buildinfo.C; cat obj/buildinfo.C; x86_64-pc-linux-gnu-g++ -I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -I/usr/include -DNAMD_TCL -I/usr/include -DNAMD_FFTW -DNAMD_FFTW_3 -DNAMD_VERSION=\"2.10\" -DNAMD_PLATFORM=\"Linux-x86_64\" -DREMOVE_PROXYRESULTMSG_EXTRACOPY -DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed -o obj/buildinfo.o -c obj/buildinfo.C >const char *namd_build_date = "lun may 27 17:21:08 CEST 2019"; >const char *namd_build_user = ""; >const char *namd_build_machine = "post-doc.mis.rech.u-picardie.fr"; >/usr/bin/charmc -Wl,-O1 -Wl,--as-needed -verbose -ld++-option \ >'-I/usr/include/charm-6.8.2 -DCMK_OPTIMIZE=1 -Iinc -Isrc -O2 -pipe -march=native -fno-stack-protector -Wl,-O1 -Wl,--as-needed ' \ >"-module NeighborLB -module HybridLB -module RefineLB -module GreedyLB -module CkMulticast" -language charm++ \ >obj/buildinfo.o \ >obj/ComputeMoa.o obj/ComputeMsm.o obj/ComputeMsmMsa.o obj/ComputeMsmSerial.o obj/ComputeFmmSerial.o obj/msm.o obj/msm_longrng.o obj/msm_longrng_sprec.o obj/msm_setup.o obj/msm_shortrng.o obj/msm_shortrng_sprec.o obj/wkfutils.o obj/common.o obj/dcdlib.o obj/erf.o obj/fitrms.o obj/main.o obj/mainfunc.o obj/memusage.o obj/strlib.o obj/AlgSeven.o obj/AlgRecBisection.o obj/AlgNbor.o obj/AtomMap.o obj/BackEnd.o obj/BroadcastMgr.o obj/BroadcastClient.o obj/CollectionMaster.o obj/CollectionMgr.o obj/Communicate.o obj/Compute.o obj/ComputeAngles.o obj/ComputeAniso.o obj/ComputeBonds.o obj/ComputeConsForce.o obj/ComputeConsForceMsgs.o obj/ComputeCrossterms.o obj/ComputeCylindricalBC.o obj/ComputeDihedrals.o obj/ComputeDPME.o obj/ComputeDPMEMsgs.o obj/ComputeDPMTA.o obj/ComputeEField.o obj/ComputeEwald.o obj/ComputeExt.o obj/ComputeGBISser.o obj/ComputeGBIS.o obj/ComputeGromacsPair.o obj/ComputeLCPO.o obj/ComputeFullDirect.o obj/ComputeHomePatch.o obj/ComputeHomePatches.o obj/ComputeImpropers.o obj/ComputeGlobal.o obj/ComputeGlobalMsgs.o obj/ComputeGridForce.o obj/ComputeMap.o obj/ComputeMgr.o obj/ComputeNonbondedSelf.o obj/ComputeNonbondedPair.o obj/ComputeNonbondedUtil.o obj/ComputeNonbondedStd.o obj/ComputeNonbondedFEP.o obj/ComputeNonbondedGo.o obj/ComputeNonbondedTI.o obj/ComputeNonbondedLES.o obj/ComputeNonbondedPProf.o obj/ComputeNonbondedTabEnergies.o obj/ComputeNonbondedCUDA.o obj/ComputeNonbondedCUDAExcl.o obj/ComputeNonbondedMIC.o obj/ComputeNonbondedMICKernel.o obj/ComputePatch.o obj/ComputePatchPair.o obj/ComputePme.o obj/OptPme.o obj/OptPmeRealSpace.o obj/ComputeRestraints.o obj/ComputeSphericalBC.o obj/ComputeStir.o obj/ComputeTclBC.o obj/ComputeThole.o obj/ConfigList.o obj/Controller.o obj/ccsinterface.o obj/DataStream.o obj/DumpBench.o obj/FreeEnergyAssert.o obj/FreeEnergyGroup.o obj/FreeEnergyLambda.o obj/FreeEnergyLambdMgr.o obj/FreeEnergyParse.o obj/FreeEnergyRestrain.o obj/FreeEnergyRMgr.o obj/FreeEnergyVector.o obj/fstream_namd.o obj/GlobalMaster.o obj/GlobalMasterServer.o obj/GlobalMasterTest.o obj/GlobalMasterIMD.o obj/GlobalMasterTcl.o obj/GlobalMasterSMD.o obj/GlobalMasterTMD.o obj/Matrix4Symmetry.o obj/GlobalMasterSymmetry.o obj/GlobalMasterFreeEnergy.o obj/GlobalMasterEasy.o obj/GlobalMasterMisc.o obj/colvar.o obj/colvaratoms.o obj/colvarbias.o obj/colvarbias_abf.o obj/colvarbias_alb.o obj/colvarbias_meta.o obj/colvarbias_restraint.o obj/colvarcomp.o obj/colvarcomp_angles.o obj/colvarcomp_coordnums.o obj/colvarcomp_distances.o obj/colvarcomp_protein.o obj/colvarcomp_rotations.o obj/colvargrid.o obj/colvarmodule.o obj/colvarparse.o obj/colvarproxy_namd.o obj/colvarscript.o obj/colvartypes.o obj/colvarvalue.o obj/GridForceGrid.o obj/GromacsTopFile.o obj/heap.o obj/HomePatch.o obj/IMDOutput.o obj/InfoStream.o obj/LdbCoordinator.o obj/LJTable.o obj/Measure.o obj/MGridforceParams.o obj/MStream.o obj/MigrateAtomsMsg.o obj/Molecule.o obj/Molecule2.o obj/GoMolecule.o obj/NamdCentLB.o obj/NamdNborLB.o obj/NamdHybridLB.o obj/NamdDummyLB.o obj/NamdState.o obj/NamdOneTools.o obj/Node.o obj/Output.o obj/Parameters.o obj/ParseOptions.o obj/Patch.o obj/PatchMgr.o obj/PatchMap.o obj/PDB.o obj/PDBData.o obj/PmeKSpace.o obj/PmeRealSpace.o obj/ProcessorPrivate.o obj/ProxyMgr.o obj/ProxyPatch.o obj/Rebalancer.o obj/RecBisection.o obj/ReductionMgr.o obj/RefineOnly.o obj/RefineTorusLB.o obj/ScriptTcl.o obj/Sequencer.o obj/Set.o obj/Settle.o obj/SimParameters.o obj/SortAtoms.o obj/Sync.o obj/TclCommands.o obj/TorusLB.o obj/WorkDistrib.o obj/pub3dfft.o obj/vmdsock.o obj/parm.o obj/imd.o obj/CompressPsf.o obj/PluginIOMgr.o obj/DataExchanger.o obj/ParallelIOMgr.o \ > \ > \ > \ > \ > \ >-ltcl8.6 -ltclstub8.6 -ldl -pthread \ >-L/usr/lib64 -lfftw3f \ >obj/dcdplugin.o obj/jsplugin.o obj/namdbinplugin.o obj/pdbplugin.o obj/psfplugin.o \ > \ > \ >-lm -o namd2 >Verbose mode set >Adding file obj/buildinfo.o... >Adding file obj/ComputeMoa.o... >Adding file obj/ComputeMsm.o... >Adding file obj/ComputeMsmMsa.o... >Adding file obj/ComputeMsmSerial.o... >Adding file obj/ComputeFmmSerial.o... >Adding file obj/msm.o... >Adding file obj/msm_longrng.o... >Adding file obj/msm_longrng_sprec.o... >Adding file obj/msm_setup.o... >Adding file obj/msm_shortrng.o... >Adding file obj/msm_shortrng_sprec.o... >Adding file obj/wkfutils.o... >Adding file obj/common.o... >Adding file obj/dcdlib.o... >Adding file obj/erf.o... >Adding file obj/fitrms.o... >Adding file obj/main.o... >Adding file obj/mainfunc.o... >Adding file obj/memusage.o... >Adding file obj/strlib.o... >Adding file obj/AlgSeven.o... >Adding file obj/AlgRecBisection.o... >Adding file obj/AlgNbor.o... >Adding file obj/AtomMap.o... >Adding file obj/BackEnd.o... >Adding file obj/BroadcastMgr.o... >Adding file obj/BroadcastClient.o... >Adding file obj/CollectionMaster.o... >Adding file obj/CollectionMgr.o... >Adding file obj/Communicate.o... >Adding file obj/Compute.o... >Adding file obj/ComputeAngles.o... >Adding file obj/ComputeAniso.o... >Adding file obj/ComputeBonds.o... >Adding file obj/ComputeConsForce.o... >Adding file obj/ComputeConsForceMsgs.o... >Adding file obj/ComputeCrossterms.o... >Adding file obj/ComputeCylindricalBC.o... >Adding file obj/ComputeDihedrals.o... >Adding file obj/ComputeDPME.o... >Adding file obj/ComputeDPMEMsgs.o... >Adding file obj/ComputeDPMTA.o... >Adding file obj/ComputeEField.o... >Adding file obj/ComputeEwald.o... >Adding file obj/ComputeExt.o... >Adding file obj/ComputeGBISser.o... >Adding file obj/ComputeGBIS.o... >Adding file obj/ComputeGromacsPair.o... >Adding file obj/ComputeLCPO.o... >Adding file obj/ComputeFullDirect.o... >Adding file obj/ComputeHomePatch.o... >Adding file obj/ComputeHomePatches.o... >Adding file obj/ComputeImpropers.o... >Adding file obj/ComputeGlobal.o... >Adding file obj/ComputeGlobalMsgs.o... >Adding file obj/ComputeGridForce.o... >Adding file obj/ComputeMap.o... >Adding file obj/ComputeMgr.o... >Adding file obj/ComputeNonbondedSelf.o... >Adding file obj/ComputeNonbondedPair.o... >Adding file obj/ComputeNonbondedUtil.o... >Adding file obj/ComputeNonbondedStd.o... >Adding file obj/ComputeNonbondedFEP.o... >Adding file obj/ComputeNonbondedGo.o... >Adding file obj/ComputeNonbondedTI.o... >Adding file obj/ComputeNonbondedLES.o... >Adding file obj/ComputeNonbondedPProf.o... >Adding file obj/ComputeNonbondedTabEnergies.o... >Adding file obj/ComputeNonbondedCUDA.o... >Adding file obj/ComputeNonbondedCUDAExcl.o... >Adding file obj/ComputeNonbondedMIC.o... >Adding file obj/ComputeNonbondedMICKernel.o... >Adding file obj/ComputePatch.o... >Adding file obj/ComputePatchPair.o... >Adding file obj/ComputePme.o... >Adding file obj/OptPme.o... >Adding file obj/OptPmeRealSpace.o... >Adding file obj/ComputeRestraints.o... >Adding file obj/ComputeSphericalBC.o... >Adding file obj/ComputeStir.o... >Adding file obj/ComputeTclBC.o... >Adding file obj/ComputeThole.o... >Adding file obj/ConfigList.o... >Adding file obj/Controller.o... >Adding file obj/ccsinterface.o... >Adding file obj/DataStream.o... >Adding file obj/DumpBench.o... >Adding file obj/FreeEnergyAssert.o... >Adding file obj/FreeEnergyGroup.o... >Adding file obj/FreeEnergyLambda.o... >Adding file obj/FreeEnergyLambdMgr.o... >Adding file obj/FreeEnergyParse.o... >Adding file obj/FreeEnergyRestrain.o... >Adding file obj/FreeEnergyRMgr.o... >Adding file obj/FreeEnergyVector.o... >Adding file obj/fstream_namd.o... >Adding file obj/GlobalMaster.o... >Adding file obj/GlobalMasterServer.o... >Adding file obj/GlobalMasterTest.o... >Adding file obj/GlobalMasterIMD.o... >Adding file obj/GlobalMasterTcl.o... >Adding file obj/GlobalMasterSMD.o... >Adding file obj/GlobalMasterTMD.o... >Adding file obj/Matrix4Symmetry.o... >Adding file obj/GlobalMasterSymmetry.o... >Adding file obj/GlobalMasterFreeEnergy.o... >Adding file obj/GlobalMasterEasy.o... >Adding file obj/GlobalMasterMisc.o... >Adding file obj/colvar.o... >Adding file obj/colvaratoms.o... >Adding file obj/colvarbias.o... >Adding file obj/colvarbias_abf.o... >Adding file obj/colvarbias_alb.o... >Adding file obj/colvarbias_meta.o... >Adding file obj/colvarbias_restraint.o... >Adding file obj/colvarcomp.o... >Adding file obj/colvarcomp_angles.o... >Adding file obj/colvarcomp_coordnums.o... >Adding file obj/colvarcomp_distances.o... >Adding file obj/colvarcomp_protein.o... >Adding file obj/colvarcomp_rotations.o... >Adding file obj/colvargrid.o... >Adding file obj/colvarmodule.o... >Adding file obj/colvarparse.o... >Adding file obj/colvarproxy_namd.o... >Adding file obj/colvarscript.o... >Adding file obj/colvartypes.o... >Adding file obj/colvarvalue.o... >Adding file obj/GridForceGrid.o... >Adding file obj/GromacsTopFile.o... >Adding file obj/heap.o... >Adding file obj/HomePatch.o... >Adding file obj/IMDOutput.o... >Adding file obj/InfoStream.o... >Adding file obj/LdbCoordinator.o... >Adding file obj/LJTable.o... >Adding file obj/Measure.o... >Adding file obj/MGridforceParams.o... >Adding file obj/MStream.o... >Adding file obj/MigrateAtomsMsg.o... >Adding file obj/Molecule.o... >Adding file obj/Molecule2.o... >Adding file obj/GoMolecule.o... >Adding file obj/NamdCentLB.o... >Adding file obj/NamdNborLB.o... >Adding file obj/NamdHybridLB.o... >Adding file obj/NamdDummyLB.o... >Adding file obj/NamdState.o... >Adding file obj/NamdOneTools.o... >Adding file obj/Node.o... >Adding file obj/Output.o... >Adding file obj/Parameters.o... >Adding file obj/ParseOptions.o... >Adding file obj/Patch.o... >Adding file obj/PatchMgr.o... >Adding file obj/PatchMap.o... >Adding file obj/PDB.o... >Adding file obj/PDBData.o... >Adding file obj/PmeKSpace.o... >Adding file obj/PmeRealSpace.o... >Adding file obj/ProcessorPrivate.o... >Adding file obj/ProxyMgr.o... >Adding file obj/ProxyPatch.o... >Adding file obj/Rebalancer.o... >Adding file obj/RecBisection.o... >Adding file obj/ReductionMgr.o... >Adding file obj/RefineOnly.o... >Adding file obj/RefineTorusLB.o... >Adding file obj/ScriptTcl.o... >Adding file obj/Sequencer.o... >Adding file obj/Set.o... >Adding file obj/Settle.o... >Adding file obj/SimParameters.o... >Adding file obj/SortAtoms.o... >Adding file obj/Sync.o... >Adding file obj/TclCommands.o... >Adding file obj/TorusLB.o... >Adding file obj/WorkDistrib.o... >Adding file obj/pub3dfft.o... >Adding file obj/vmdsock.o... >Adding file obj/parm.o... >Adding file obj/imd.o... >Adding file obj/CompressPsf.o... >Adding file obj/PluginIOMgr.o... >Adding file obj/DataExchanger.o... >Adding file obj/ParallelIOMgr.o... >Adding file obj/dcdplugin.o... >Adding file obj/jsplugin.o... >Adding file obj/namdbinplugin.o... >Adding file obj/pdbplugin.o... >Adding file obj/psfplugin.o... >[01m[Kx86_64-pc-linux-gnu-gfortran:[m[K [01;31m[Kerror: [m[Kunrecognized command line option â[01m[K-pipe.a[m[Kâ; did you mean â[01m[K-pipe[m[Kâ? >OpenMP support not enabled >charmc> ----------- Module dependency search ------------ >charmc> ----------- Module dependency search complete ------------ >Adding registration for module NeighborLB >Adding registration for module HybridLB >Adding registration for module RefineLB >Adding registration for module GreedyLB >Adding registration for module CkMulticast >charmc: Executing g++ -DCMK_GFORTRAN -D_REENTRANT -D__CHARMC__=1 -DCMK_OPTIMIZE=1 -Iinc -Isrc -O2 -pipe -march=native -fno-stack-protector -pthread -fno-stack-protector -fno-lifetime-dse -fPIC -c moduleinit1819.C -o moduleinit1819.o >charmc> All libraries are: -L/usr/lib64 -I/usr/include/charm-6.8.2 obj/buildinfo.o obj/ComputeMoa.o obj/ComputeMsm.o obj/ComputeMsmMsa.o obj/ComputeMsmSerial.o obj/ComputeFmmSerial.o obj/msm.o obj/msm_longrng.o obj/msm_longrng_sprec.o obj/msm_setup.o obj/msm_shortrng.o obj/msm_shortrng_sprec.o obj/wkfutils.o obj/common.o obj/dcdlib.o obj/erf.o obj/fitrms.o obj/main.o obj/mainfunc.o obj/memusage.o obj/strlib.o obj/AlgSeven.o obj/AlgRecBisection.o obj/AlgNbor.o obj/AtomMap.o obj/BackEnd.o obj/BroadcastMgr.o obj/BroadcastClient.o obj/CollectionMaster.o obj/CollectionMgr.o obj/Communicate.o obj/Compute.o obj/ComputeAngles.o obj/ComputeAniso.o obj/ComputeBonds.o obj/ComputeConsForce.o obj/ComputeConsForceMsgs.o obj/ComputeCrossterms.o obj/ComputeCylindricalBC.o obj/ComputeDihedrals.o obj/ComputeDPME.o obj/ComputeDPMEMsgs.o obj/ComputeDPMTA.o obj/ComputeEField.o obj/ComputeEwald.o obj/ComputeExt.o obj/ComputeGBISser.o obj/ComputeGBIS.o obj/ComputeGromacsPair.o obj/ComputeLCPO.o obj/ComputeFullDirect.o obj/ComputeHomePatch.o obj/ComputeHomePatches.o obj/ComputeImpropers.o obj/ComputeGlobal.o obj/ComputeGlobalMsgs.o obj/ComputeGridForce.o obj/ComputeMap.o obj/ComputeMgr.o obj/ComputeNonbondedSelf.o obj/ComputeNonbondedPair.o obj/ComputeNonbondedUtil.o obj/ComputeNonbondedStd.o obj/ComputeNonbondedFEP.o obj/ComputeNonbondedGo.o obj/ComputeNonbondedTI.o obj/ComputeNonbondedLES.o obj/ComputeNonbondedPProf.o obj/ComputeNonbondedTabEnergies.o obj/ComputeNonbondedCUDA.o obj/ComputeNonbondedCUDAExcl.o obj/ComputeNonbondedMIC.o obj/ComputeNonbondedMICKernel.o obj/ComputePatch.o obj/ComputePatchPair.o obj/ComputePme.o obj/OptPme.o obj/OptPmeRealSpace.o obj/ComputeRestraints.o obj/ComputeSphericalBC.o obj/ComputeStir.o obj/ComputeTclBC.o obj/ComputeThole.o obj/ConfigList.o obj/Controller.o obj/ccsinterface.o obj/DataStream.o obj/DumpBench.o obj/FreeEnergyAssert.o obj/FreeEnergyGroup.o obj/FreeEnergyLambda.o obj/FreeEnergyLambdMgr.o obj/FreeEnergyParse.o obj/FreeEnergyRestrain.o obj/FreeEnergyRMgr.o obj/FreeEnergyVector.o obj/fstream_namd.o obj/GlobalMaster.o obj/GlobalMasterServer.o obj/GlobalMasterTest.o obj/GlobalMasterIMD.o obj/GlobalMasterTcl.o obj/GlobalMasterSMD.o obj/GlobalMasterTMD.o obj/Matrix4Symmetry.o obj/GlobalMasterSymmetry.o obj/GlobalMasterFreeEnergy.o obj/GlobalMasterEasy.o obj/GlobalMasterMisc.o obj/colvar.o obj/colvaratoms.o obj/colvarbias.o obj/colvarbias_abf.o obj/colvarbias_alb.o obj/colvarbias_meta.o obj/colvarbias_restraint.o obj/colvarcomp.o obj/colvarcomp_angles.o obj/colvarcomp_coordnums.o obj/colvarcomp_distances.o obj/colvarcomp_protein.o obj/colvarcomp_rotations.o obj/colvargrid.o obj/colvarmodule.o obj/colvarparse.o obj/colvarproxy_namd.o obj/colvarscript.o obj/colvartypes.o obj/colvarvalue.o obj/GridForceGrid.o obj/GromacsTopFile.o obj/heap.o obj/HomePatch.o obj/IMDOutput.o obj/InfoStream.o obj/LdbCoordinator.o obj/LJTable.o obj/Measure.o obj/MGridforceParams.o obj/MStream.o obj/MigrateAtomsMsg.o obj/Molecule.o obj/Molecule2.o obj/GoMolecule.o obj/NamdCentLB.o obj/NamdNborLB.o obj/NamdHybridLB.o obj/NamdDummyLB.o obj/NamdState.o obj/NamdOneTools.o obj/Node.o obj/Output.o obj/Parameters.o obj/ParseOptions.o obj/Patch.o obj/PatchMgr.o obj/PatchMap.o obj/PDB.o obj/PDBData.o obj/PmeKSpace.o obj/PmeRealSpace.o obj/ProcessorPrivate.o obj/ProxyMgr.o obj/ProxyPatch.o obj/Rebalancer.o obj/RecBisection.o obj/ReductionMgr.o obj/RefineOnly.o obj/RefineTorusLB.o obj/ScriptTcl.o obj/Sequencer.o obj/Set.o obj/Settle.o obj/SimParameters.o obj/SortAtoms.o obj/Sync.o obj/TclCommands.o obj/TorusLB.o obj/WorkDistrib.o obj/pub3dfft.o obj/vmdsock.o obj/parm.o obj/imd.o obj/CompressPsf.o obj/PluginIOMgr.o obj/DataExchanger.o obj/ParallelIOMgr.o obj/dcdplugin.o obj/jsplugin.o obj/namdbinplugin.o obj/pdbplugin.o obj/psfplugin.o moduleinit1819.o -lmoduleCkMulticast -lmoduleGreedyLB -lmoduleRefineLB -lmoduleHybridLB -lmoduleNeighborLB -lckmain -lck -lmemory-default -lthreads-default -lconv-cplus-y -lconv-core -ltmgr -lconv-util -lconv-partition -lmemory-default -lthreads-default -lldb-rand -lconv-ldb -lpthread -lckqt -ldl -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -ltcl8.6 -ltclstub8.6 -ldl -lfftw3f -lm -lmoduleNeighborLB -lmoduleHybridLB -lmoduleRefineLB -lmoduleGreedyLB -lmoduleCkMulticast -lmoduleNDMeshStreamer -lmodulecompletion -lnuma -lm >charmc: Executing g++ -rdynamic -D_REENTRANT -O2 -pipe -march=native -fno-stack-protector -pthread -L/usr/lib64 -fPIC -I/usr/include/charm-6.8.2 -o namd2 -L/usr/lib64 -I/usr/include/charm-6.8.2 obj/buildinfo.o obj/ComputeMoa.o obj/ComputeMsm.o obj/ComputeMsmMsa.o obj/ComputeMsmSerial.o obj/ComputeFmmSerial.o obj/msm.o obj/msm_longrng.o obj/msm_longrng_sprec.o obj/msm_setup.o obj/msm_shortrng.o obj/msm_shortrng_sprec.o obj/wkfutils.o obj/common.o obj/dcdlib.o obj/erf.o obj/fitrms.o obj/main.o obj/mainfunc.o obj/memusage.o obj/strlib.o obj/AlgSeven.o obj/AlgRecBisection.o obj/AlgNbor.o obj/AtomMap.o obj/BackEnd.o obj/BroadcastMgr.o obj/BroadcastClient.o obj/CollectionMaster.o obj/CollectionMgr.o obj/Communicate.o obj/Compute.o obj/ComputeAngles.o obj/ComputeAniso.o obj/ComputeBonds.o obj/ComputeConsForce.o obj/ComputeConsForceMsgs.o obj/ComputeCrossterms.o obj/ComputeCylindricalBC.o obj/ComputeDihedrals.o obj/ComputeDPME.o obj/ComputeDPMEMsgs.o obj/ComputeDPMTA.o obj/ComputeEField.o obj/ComputeEwald.o obj/ComputeExt.o obj/ComputeGBISser.o obj/ComputeGBIS.o obj/ComputeGromacsPair.o obj/ComputeLCPO.o obj/ComputeFullDirect.o obj/ComputeHomePatch.o obj/ComputeHomePatches.o obj/ComputeImpropers.o obj/ComputeGlobal.o obj/ComputeGlobalMsgs.o obj/ComputeGridForce.o obj/ComputeMap.o obj/ComputeMgr.o obj/ComputeNonbondedSelf.o obj/ComputeNonbondedPair.o obj/ComputeNonbondedUtil.o obj/ComputeNonbondedStd.o obj/ComputeNonbondedFEP.o obj/ComputeNonbondedGo.o obj/ComputeNonbondedTI.o obj/ComputeNonbondedLES.o obj/ComputeNonbondedPProf.o obj/ComputeNonbondedTabEnergies.o obj/ComputeNonbondedCUDA.o obj/ComputeNonbondedCUDAExcl.o obj/ComputeNonbondedMIC.o obj/ComputeNonbondedMICKernel.o obj/ComputePatch.o obj/ComputePatchPair.o obj/ComputePme.o obj/OptPme.o obj/OptPmeRealSpace.o obj/ComputeRestraints.o obj/ComputeSphericalBC.o obj/ComputeStir.o obj/ComputeTclBC.o obj/ComputeThole.o obj/ConfigList.o obj/Controller.o obj/ccsinterface.o obj/DataStream.o obj/DumpBench.o obj/FreeEnergyAssert.o obj/FreeEnergyGroup.o obj/FreeEnergyLambda.o obj/FreeEnergyLambdMgr.o obj/FreeEnergyParse.o obj/FreeEnergyRestrain.o obj/FreeEnergyRMgr.o obj/FreeEnergyVector.o obj/fstream_namd.o obj/GlobalMaster.o obj/GlobalMasterServer.o obj/GlobalMasterTest.o obj/GlobalMasterIMD.o obj/GlobalMasterTcl.o obj/GlobalMasterSMD.o obj/GlobalMasterTMD.o obj/Matrix4Symmetry.o obj/GlobalMasterSymmetry.o obj/GlobalMasterFreeEnergy.o obj/GlobalMasterEasy.o obj/GlobalMasterMisc.o obj/colvar.o obj/colvaratoms.o obj/colvarbias.o obj/colvarbias_abf.o obj/colvarbias_alb.o obj/colvarbias_meta.o obj/colvarbias_restraint.o obj/colvarcomp.o obj/colvarcomp_angles.o obj/colvarcomp_coordnums.o obj/colvarcomp_distances.o obj/colvarcomp_protein.o obj/colvarcomp_rotations.o obj/colvargrid.o obj/colvarmodule.o obj/colvarparse.o obj/colvarproxy_namd.o obj/colvarscript.o obj/colvartypes.o obj/colvarvalue.o obj/GridForceGrid.o obj/GromacsTopFile.o obj/heap.o obj/HomePatch.o obj/IMDOutput.o obj/InfoStream.o obj/LdbCoordinator.o obj/LJTable.o obj/Measure.o obj/MGridforceParams.o obj/MStream.o obj/MigrateAtomsMsg.o obj/Molecule.o obj/Molecule2.o obj/GoMolecule.o obj/NamdCentLB.o obj/NamdNborLB.o obj/NamdHybridLB.o obj/NamdDummyLB.o obj/NamdState.o obj/NamdOneTools.o obj/Node.o obj/Output.o obj/Parameters.o obj/ParseOptions.o obj/Patch.o obj/PatchMgr.o obj/PatchMap.o obj/PDB.o obj/PDBData.o obj/PmeKSpace.o obj/PmeRealSpace.o obj/ProcessorPrivate.o obj/ProxyMgr.o obj/ProxyPatch.o obj/Rebalancer.o obj/RecBisection.o obj/ReductionMgr.o obj/RefineOnly.o obj/RefineTorusLB.o obj/ScriptTcl.o obj/Sequencer.o obj/Set.o obj/Settle.o obj/SimParameters.o obj/SortAtoms.o obj/Sync.o obj/TclCommands.o obj/TorusLB.o obj/WorkDistrib.o obj/pub3dfft.o obj/vmdsock.o obj/parm.o obj/imd.o obj/CompressPsf.o obj/PluginIOMgr.o obj/DataExchanger.o obj/ParallelIOMgr.o obj/dcdplugin.o obj/jsplugin.o obj/namdbinplugin.o obj/pdbplugin.o obj/psfplugin.o moduleinit1819.o -lmoduleCkMulticast -lmoduleGreedyLB -lmoduleRefineLB -lmoduleHybridLB -lmoduleNeighborLB -lckmain -lck -lmemory-default -lthreads-default -lconv-cplus-y -lconv-core -ltmgr -lconv-util -lconv-partition -lmemory-default -lthreads-default -lldb-rand -lconv-ldb -lpthread -lckqt -ldl -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -ltcl8.6 -ltclstub8.6 -ldl -lfftw3f -lm -lmoduleNeighborLB -lmoduleHybridLB -lmoduleRefineLB -lmoduleGreedyLB -lmoduleCkMulticast -lmoduleNDMeshStreamer -lmodulecompletion -lnuma -lm >/usr/lib/gcc/x86_64-pc-linux-gnu/8.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib64/libmoduleHybridLB.so: undefined reference to `AllocateGreedyRefineLB()' >collect2: error: ld returned 1 exit status >Fatal Error by charmc in directory /var/tmp/portage/sci-chemistry/namd-2.10/work/NAMD_2.10_Source/Linux-x86_64-g++ > Command g++ -rdynamic -D_REENTRANT -O2 -pipe -march=native -fno-stack-protector -pthread -L/usr/lib64 -fPIC -I/usr/include/charm-6.8.2 -o namd2 -L/usr/lib64 -I/usr/include/charm-6.8.2 obj/buildinfo.o obj/ComputeMoa.o obj/ComputeMsm.o obj/ComputeMsmMsa.o obj/ComputeMsmSerial.o obj/ComputeFmmSerial.o obj/msm.o obj/msm_longrng.o obj/msm_longrng_sprec.o obj/msm_setup.o obj/msm_shortrng.o obj/msm_shortrng_sprec.o obj/wkfutils.o obj/common.o obj/dcdlib.o obj/erf.o obj/fitrms.o obj/main.o obj/mainfunc.o obj/memusage.o obj/strlib.o obj/AlgSeven.o obj/AlgRecBisection.o obj/AlgNbor.o obj/AtomMap.o obj/BackEnd.o obj/BroadcastMgr.o obj/BroadcastClient.o obj/CollectionMaster.o obj/CollectionMgr.o obj/Communicate.o obj/Compute.o obj/ComputeAngles.o obj/ComputeAniso.o obj/ComputeBonds.o obj/ComputeConsForce.o obj/ComputeConsForceMsgs.o obj/ComputeCrossterms.o obj/ComputeCylindricalBC.o obj/ComputeDihedrals.o obj/ComputeDPME.o obj/ComputeDPMEMsgs.o obj/ComputeDPMTA.o obj/ComputeEField.o obj/ComputeEwald.o obj/ComputeExt.o obj/ComputeGBISser.o obj/ComputeGBIS.o obj/ComputeGromacsPair.o obj/ComputeLCPO.o obj/ComputeFullDirect.o obj/ComputeHomePatch.o obj/ComputeHomePatches.o obj/ComputeImpropers.o obj/ComputeGlobal.o obj/ComputeGlobalMsgs.o obj/ComputeGridForce.o obj/ComputeMap.o obj/ComputeMgr.o obj/ComputeNonbondedSelf.o obj/ComputeNonbondedPair.o obj/ComputeNonbondedUtil.o obj/ComputeNonbondedStd.o obj/ComputeNonbondedFEP.o obj/ComputeNonbondedGo.o obj/ComputeNonbondedTI.o obj/ComputeNonbondedLES.o obj/ComputeNonbondedPProf.o obj/ComputeNonbondedTabEnergies.o obj/ComputeNonbondedCUDA.o obj/ComputeNonbondedCUDAExcl.o obj/ComputeNonbondedMIC.o obj/ComputeNonbondedMICKernel.o obj/ComputePatch.o obj/ComputePatchPair.o obj/ComputePme.o obj/OptPme.o obj/OptPmeRealSpace.o obj/ComputeRestraints.o obj/ComputeSphericalBC.o obj/ComputeStir.o obj/ComputeTclBC.o obj/ComputeThole.o obj/ConfigList.o obj/Controller.o obj/ccsinterface.o obj/DataStream.o obj/DumpBench.o obj/FreeEnergyAssert.o obj/FreeEnergyGroup.o obj/FreeEnergyLambda.o obj/FreeEnergyLambdMgr.o obj/FreeEnergyParse.o obj/FreeEnergyRestrain.o obj/FreeEnergyRMgr.o obj/FreeEnergyVector.o obj/fstream_namd.o obj/GlobalMaster.o obj/GlobalMasterServer.o obj/GlobalMasterTest.o obj/GlobalMasterIMD.o obj/GlobalMasterTcl.o obj/GlobalMasterSMD.o obj/GlobalMasterTMD.o obj/Matrix4Symmetry.o obj/GlobalMasterSymmetry.o obj/GlobalMasterFreeEnergy.o obj/GlobalMasterEasy.o obj/GlobalMasterMisc.o obj/colvar.o obj/colvaratoms.o obj/colvarbias.o obj/colvarbias_abf.o obj/colvarbias_alb.o obj/colvarbias_meta.o obj/colvarbias_restraint.o obj/colvarcomp.o obj/colvarcomp_angles.o obj/colvarcomp_coordnums.o obj/colvarcomp_distances.o obj/colvarcomp_protein.o obj/colvarcomp_rotations.o obj/colvargrid.o obj/colvarmodule.o obj/colvarparse.o obj/colvarproxy_namd.o obj/colvarscript.o obj/colvartypes.o obj/colvarvalue.o obj/GridForceGrid.o obj/GromacsTopFile.o obj/heap.o obj/HomePatch.o obj/IMDOutput.o obj/InfoStream.o obj/LdbCoordinator.o obj/LJTable.o obj/Measure.o obj/MGridforceParams.o obj/MStream.o obj/MigrateAtomsMsg.o obj/Molecule.o obj/Molecule2.o obj/GoMolecule.o obj/NamdCentLB.o obj/NamdNborLB.o obj/NamdHybridLB.o obj/NamdDummyLB.o obj/NamdState.o obj/NamdOneTools.o obj/Node.o obj/Output.o obj/Parameters.o obj/ParseOptions.o obj/Patch.o obj/PatchMgr.o obj/PatchMap.o obj/PDB.o obj/PDBData.o obj/PmeKSpace.o obj/PmeRealSpace.o obj/ProcessorPrivate.o obj/ProxyMgr.o obj/ProxyPatch.o obj/Rebalancer.o obj/RecBisection.o obj/ReductionMgr.o obj/RefineOnly.o obj/RefineTorusLB.o obj/ScriptTcl.o obj/Sequencer.o obj/Set.o obj/Settle.o obj/SimParameters.o obj/SortAtoms.o obj/Sync.o obj/TclCommands.o obj/TorusLB.o obj/WorkDistrib.o obj/pub3dfft.o obj/vmdsock.o obj/parm.o obj/imd.o obj/CompressPsf.o obj/PluginIOMgr.o obj/DataExchanger.o obj/ParallelIOMgr.o obj/dcdplugin.o obj/jsplugin.o obj/namdbinplugin.o obj/pdbplugin.o obj/psfplugin.o moduleinit1819.o -lmoduleCkMulticast -lmoduleGreedyLB -lmoduleRefineLB -lmoduleHybridLB -lmoduleNeighborLB -lckmain -lck -lmemory-default -lthreads-default -lconv-cplus-y -lconv-core -ltmgr -lconv-util -lconv-partition -lmemory-default -lthreads-default -lldb-rand -lconv-ldb -lpthread -lckqt -ldl -Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--as-needed -ltcl8.6 -ltclstub8.6 -ldl -lfftw3f -lm -lmoduleNeighborLB -lmoduleHybridLB -lmoduleRefineLB -lmoduleGreedyLB -lmoduleCkMulticast -lmoduleNDMeshStreamer -lmodulecompletion -lnuma -lm returned error code 1 >charmc exiting... >rm -f moduleinit1819.C moduleinit1819.o >make: *** [Makefile:437: namd2] Error 1 > [31;01m*[0m ERROR: sci-chemistry/namd-2.10::gentoo failed (compile phase): > [31;01m*[0m emake failed > [31;01m*[0m > [31;01m*[0m If you need support, post the output of `emerge --info '=sci-chemistry/namd-2.10::gentoo'`, > [31;01m*[0m the complete build log and the output of `emerge -pqv '=sci-chemistry/namd-2.10::gentoo'`. > [31;01m*[0m The complete build log is located at '/var/log/portage/sci-chemistry:namd-2.10:20190527-152101.log'. > [31;01m*[0m For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-chemistry/namd-2.10/temp/build.log'. > [31;01m*[0m The ebuild environment file is located at '/var/tmp/portage/sci-chemistry/namd-2.10/temp/environment'. > [31;01m*[0m Working directory: '/var/tmp/portage/sci-chemistry/namd-2.10/work/NAMD_2.10_Source/Linux-x86_64-g++' > [31;01m*[0m S: '/var/tmp/portage/sci-chemistry/namd-2.10/work/NAMD_2.10_Source'
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