Build fails at 'check-executables'.

build.log (text/plain), 17.75 KB, created by Jeremy Murphy on 2009-08-22 09:49:23 UTC

 [32;01m*[0m Using: sun-jdk-1.6
>>> Unpacking source...
>>> Unpacking jmol-11.7.19-full.tar.gz to /home/portage/sci-chemistry/jmol-11.7.19/work
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/Jmol.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_Minimize.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_Popup.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_Quantum.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ReadersCifPdb.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ReadersMolXyz.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ReadersMore.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ReadersXml.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ShapeBio.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ShapeSpecial.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ShapeSurface.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_Smiles.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_Symmetry.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_ca.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_cs.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_da.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_de.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_el.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_en_GB.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_es.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_et.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_fr.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_hu.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_it.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_ko.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_nb.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_nl.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_pl.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_pt.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_pt_BR.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_sl.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_sv.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_tr.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_Minimize.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_Popup.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_Quantum.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ReadersCifPdb.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ReadersMolXyz.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ReadersMore.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ReadersXml.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ShapeBio.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ShapeSpecial.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ShapeSurface.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_Smiles.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_Symmetry.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_ca.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_cs.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_da.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_de.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_el.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_en_GB.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_es.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_et.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_fr.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_hu.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_it.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_ko.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_nb.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_nl.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_pl.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_pt.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_pt_BR.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_sl.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_sv.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_tr.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/plugin-jars/dadmlbrowser.jar'
removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/plugin-jars/dirbrowser.jar'
`netscape.jar' -> `netscape.tempjar'
removed `Acme.jar'
removed `ant-contrib.jar'
removed `commons-cli-1.0.jar'
removed `gnujaxp-onlysax.jar'
removed `gnujaxp.jar'
removed `itext-1.4.5.jar'
removed `junit.jar'
removed `saxon.jar'
removed `vecmath1.2-1.14.jar'
removed `vecmath1.2-1.14.tar.gz'
`netscape.tempjar' -> `netscape.jar'
>>> Source unpacked in /home/portage/sci-chemistry/jmol-11.7.19/work
>>> Compiling source in /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19 ...
Rewriting attributes
Rewriting ./build.xml
 [32;01m*[0m Disabling all optional ANT_TASKS
Buildfile: build.xml
  [taskdef] Could not load definitions from resource net/sf/antcontrib/antlib.xml. It could not be found.
  [taskdef] Could not load definitions from resource net/sf/antcontrib/antlib.xml. It could not be found.

init:

classes:
    [mkdir] Created dir: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/classes
    [javac] Compiling 419 source files to /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/classes
     [copy] Copying 117 files to /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/classes

setup:

check.docbook-xml:
    [mkdir] Created dir: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/docbook-xml
    [unzip] Expanding: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/doc/docbook-xml-4.4.zip into /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/docbook-xml
    [touch] Creating /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/docbook-xml.timestamp

check.docbook-xsl:
    [mkdir] Created dir: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/docbook-xsl-1.74.0
    [untar] Expanding: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/doc/docbook-xsl-1.74.0.tar.gz into /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build
    [touch] Creating /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/docbook-xsl-1.74.0.timestamp

check.xsl:
     [echo] XSLT class 'com.icl.saxon.StyleSheet' not found.
     [echo] Note that the documentation is NOT generated now.

initdoc:

jmolGuide:
     [echo] Generating user's guide
    [mkdir] Created dir: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/doc/JmolUserGuide
     [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet
     [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet
     [java] 	at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
     [java] 	at java.security.AccessController.doPrivileged(Native Method)
     [java] 	at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
     [java] 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:252)
     [java] 	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
     [java] Could not find the main class: com.icl.saxon.StyleSheet.  Program will exit.
     [java] Java Result: 1
     [echo] Generating user's guide (fr)
    [mkdir] Created dir: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/doc/JmolUserGuide_fr
     [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet
     [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet
     [java] 	at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
     [java] 	at java.security.AccessController.doPrivileged(Native Method)
     [java] 	at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
     [java] 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:252)
     [java] 	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
     [java] Could not find the main class: com.icl.saxon.StyleSheet.  Program will exit.
     [java] Java Result: 1

jmolHistory:
     [echo] Generating history of changes
    [mkdir] Created dir: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/doc/JmolHistory
     [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet
     [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet
     [java] 	at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
     [java] 	at java.security.AccessController.doPrivileged(Native Method)
     [java] 	at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
     [java] 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:252)
     [java] 	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
     [java] Could not find the main class: com.icl.saxon.StyleSheet.  Program will exit.
     [java] Java Result: 1
     [echo] Generating history of changes (fr)
     [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet
     [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet
     [java] 	at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
     [java] 	at java.security.AccessController.doPrivileged(Native Method)
     [java] 	at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
     [java] 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:252)
     [java] 	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
     [java] Could not find the main class: com.icl.saxon.StyleSheet.  Program will exit.
     [java] Java Result: 1
     [echo] Generating history of changes (nl)
     [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet
     [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet
     [java] 	at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
     [java] 	at java.security.AccessController.doPrivileged(Native Method)
     [java] 	at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
     [java] 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:252)
     [java] 	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
     [java] Could not find the main class: com.icl.saxon.StyleSheet.  Program will exit.
     [java] Java Result: 1

jmolDevelopersGuide:
     [echo] Generating developer's guide
     [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet
     [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet
     [java] 	at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
     [java] 	at java.security.AccessController.doPrivileged(Native Method)
     [java] 	at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
     [java] 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:252)
     [java] 	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
     [java] Could not find the main class: com.icl.saxon.StyleSheet.  Program will exit.
     [java] Java Result: 1
     [echo] Generating developer's guide (fr)
     [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet
     [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet
     [java] 	at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
     [java] 	at java.security.AccessController.doPrivileged(Native Method)
     [java] 	at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
     [java] 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:252)
     [java] 	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
     [java] Could not find the main class: com.icl.saxon.StyleSheet.  Program will exit.
     [java] Java Result: 1
     [echo] Generating developer's guide (de)
     [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet
     [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet
     [java] 	at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
     [java] 	at java.security.AccessController.doPrivileged(Native Method)
     [java] 	at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
     [java] 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
     [java] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:252)
     [java] 	at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320)
     [java] Could not find the main class: com.icl.saxon.StyleSheet.  Program will exit.
     [java] Java Result: 1

check.libjars:

libjars:

main-i18n:
  [taskdef] Could not load definitions from resource net/sf/antcontrib/antlib.xml. It could not be found.

init-i18n:

check-executables:

BUILD FAILED
/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build.xml:1016: The following error occurred while executing this line:
/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build-i18n.xml:463: Problem: failed to create task or type if
Cause: The name is undefined.
Action: Check the spelling.
Action: Check that any custom tasks/types have been declared.
Action: Check that any <presetdef>/<macrodef> declarations have taken place.


Total time: 19 seconds
 [31;01m*[0m 
 [31;01m*[0m ERROR: sci-chemistry/jmol-11.7.19 failed.
 [31;01m*[0m Call stack:
 [31;01m*[0m               ebuild.sh, line   49:  Called src_compile
 [31;01m*[0m             environment, line 4397:  Called eant '-Dlibjars.uptodate=true' 'main'
 [31;01m*[0m             environment, line 1042:  Called die
 [31;01m*[0m The specific snippet of code:
 [31;01m*[0m       ant ${antflags} "${@}" || die "eant failed"
 [31;01m*[0m  The die message:
 [31;01m*[0m   eant failed
 [31;01m*[0m 
 [31;01m*[0m If you need support, post the topmost build error, and the call stack if relevant.
 [31;01m*[0m A complete build log is located at '/home/portage/sci-chemistry/jmol-11.7.19/temp/build.log'.
 [31;01m*[0m The ebuild environment file is located at '/home/portage/sci-chemistry/jmol-11.7.19/temp/environment'.
 [31;01m*[0m This ebuild is from an overlay named 'cross': '/usr/local/portage/'
 [31;01m*[0m 
!!! When you file a bug report, please include the following information:
GENTOO_VM=sun-jdk-1.6  CLASSPATH="" JAVA_HOME="/opt/sun-jdk-1.6.0.16"
JAVACFLAGS="-source 1.4 -target 1.4" COMPILER="javac"
and of course, the output of emerge --info