* Using: sun-jdk-1.6 >>> Unpacking source... >>> Unpacking jmol-11.7.19-full.tar.gz to /home/portage/sci-chemistry/jmol-11.7.19/work removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/Jmol.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_Minimize.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_Popup.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_Quantum.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ReadersCifPdb.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ReadersMolXyz.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ReadersMore.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ReadersXml.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ShapeBio.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ShapeSpecial.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_ShapeSurface.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_Smiles.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_Symmetry.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_ca.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_cs.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_da.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_de.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_el.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_en_GB.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_es.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_et.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_fr.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_hu.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_it.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_ko.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_nb.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_nl.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_pl.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_pt.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_pt_BR.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_sl.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_sv.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolApplet0_i18n_tr.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_Minimize.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_Popup.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_Quantum.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ReadersCifPdb.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ReadersMolXyz.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ReadersMore.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ReadersXml.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ShapeBio.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ShapeSpecial.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_ShapeSurface.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_Smiles.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_Symmetry.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_ca.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_cs.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_da.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_de.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_el.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_en_GB.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_es.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_et.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_fr.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_hu.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_it.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_ko.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_nb.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_nl.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_pl.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_pt.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_pt_BR.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_sl.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_sv.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/JmolAppletSigned0_i18n_tr.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/plugin-jars/dadmlbrowser.jar' removed `/home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/plugin-jars/dirbrowser.jar' `netscape.jar' -> `netscape.tempjar' removed `Acme.jar' removed `ant-contrib.jar' removed `commons-cli-1.0.jar' removed `gnujaxp-onlysax.jar' removed `gnujaxp.jar' removed `itext-1.4.5.jar' removed `junit.jar' removed `saxon.jar' removed `vecmath1.2-1.14.jar' removed `vecmath1.2-1.14.tar.gz' `netscape.tempjar' -> `netscape.jar' >>> Source unpacked in /home/portage/sci-chemistry/jmol-11.7.19/work >>> Compiling source in /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19 ... Rewriting attributes Rewriting ./build.xml * Disabling all optional ANT_TASKS Buildfile: build.xml [taskdef] Could not load definitions from resource net/sf/antcontrib/antlib.xml. It could not be found. [taskdef] Could not load definitions from resource net/sf/antcontrib/antlib.xml. It could not be found. init: classes: [mkdir] Created dir: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/classes [javac] Compiling 419 source files to /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/classes [copy] Copying 117 files to /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/classes setup: check.docbook-xml: [mkdir] Created dir: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/docbook-xml [unzip] Expanding: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/doc/docbook-xml-4.4.zip into /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/docbook-xml [touch] Creating /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/docbook-xml.timestamp check.docbook-xsl: [mkdir] Created dir: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/docbook-xsl-1.74.0 [untar] Expanding: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/doc/docbook-xsl-1.74.0.tar.gz into /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build [touch] Creating /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/docbook-xsl-1.74.0.timestamp check.xsl: [echo] XSLT class 'com.icl.saxon.StyleSheet' not found. [echo] Note that the documentation is NOT generated now. initdoc: jmolGuide: [echo] Generating user's guide [mkdir] Created dir: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/doc/JmolUserGuide [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet [java] at java.net.URLClassLoader$1.run(URLClassLoader.java:200) [java] at java.security.AccessController.doPrivileged(Native Method) [java] at java.net.URLClassLoader.findClass(URLClassLoader.java:188) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:307) [java] at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:252) [java] at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320) [java] Could not find the main class: com.icl.saxon.StyleSheet. Program will exit. [java] Java Result: 1 [echo] Generating user's guide (fr) [mkdir] Created dir: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/doc/JmolUserGuide_fr [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet [java] at java.net.URLClassLoader$1.run(URLClassLoader.java:200) [java] at java.security.AccessController.doPrivileged(Native Method) [java] at java.net.URLClassLoader.findClass(URLClassLoader.java:188) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:307) [java] at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:252) [java] at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320) [java] Could not find the main class: com.icl.saxon.StyleSheet. Program will exit. [java] Java Result: 1 jmolHistory: [echo] Generating history of changes [mkdir] Created dir: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build/doc/JmolHistory [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet [java] at java.net.URLClassLoader$1.run(URLClassLoader.java:200) [java] at java.security.AccessController.doPrivileged(Native Method) [java] at java.net.URLClassLoader.findClass(URLClassLoader.java:188) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:307) [java] at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:252) [java] at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320) [java] Could not find the main class: com.icl.saxon.StyleSheet. Program will exit. [java] Java Result: 1 [echo] Generating history of changes (fr) [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet [java] at java.net.URLClassLoader$1.run(URLClassLoader.java:200) [java] at java.security.AccessController.doPrivileged(Native Method) [java] at java.net.URLClassLoader.findClass(URLClassLoader.java:188) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:307) [java] at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:252) [java] at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320) [java] Could not find the main class: com.icl.saxon.StyleSheet. Program will exit. [java] Java Result: 1 [echo] Generating history of changes (nl) [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet [java] at java.net.URLClassLoader$1.run(URLClassLoader.java:200) [java] at java.security.AccessController.doPrivileged(Native Method) [java] at java.net.URLClassLoader.findClass(URLClassLoader.java:188) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:307) [java] at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:252) [java] at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320) [java] Could not find the main class: com.icl.saxon.StyleSheet. Program will exit. [java] Java Result: 1 jmolDevelopersGuide: [echo] Generating developer's guide [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet [java] at java.net.URLClassLoader$1.run(URLClassLoader.java:200) [java] at java.security.AccessController.doPrivileged(Native Method) [java] at java.net.URLClassLoader.findClass(URLClassLoader.java:188) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:307) [java] at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:252) [java] at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320) [java] Could not find the main class: com.icl.saxon.StyleSheet. Program will exit. [java] Java Result: 1 [echo] Generating developer's guide (fr) [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet [java] at java.net.URLClassLoader$1.run(URLClassLoader.java:200) [java] at java.security.AccessController.doPrivileged(Native Method) [java] at java.net.URLClassLoader.findClass(URLClassLoader.java:188) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:307) [java] at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:252) [java] at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320) [java] Could not find the main class: com.icl.saxon.StyleSheet. Program will exit. [java] Java Result: 1 [echo] Generating developer's guide (de) [java] Exception in thread "main" java.lang.NoClassDefFoundError: com/icl/saxon/StyleSheet [java] Caused by: java.lang.ClassNotFoundException: com.icl.saxon.StyleSheet [java] at java.net.URLClassLoader$1.run(URLClassLoader.java:200) [java] at java.security.AccessController.doPrivileged(Native Method) [java] at java.net.URLClassLoader.findClass(URLClassLoader.java:188) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:307) [java] at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301) [java] at java.lang.ClassLoader.loadClass(ClassLoader.java:252) [java] at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320) [java] Could not find the main class: com.icl.saxon.StyleSheet. Program will exit. [java] Java Result: 1 check.libjars: libjars: main-i18n: [taskdef] Could not load definitions from resource net/sf/antcontrib/antlib.xml. It could not be found. init-i18n: check-executables: BUILD FAILED /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build.xml:1016: The following error occurred while executing this line: /home/portage/sci-chemistry/jmol-11.7.19/work/jmol-11.7.19/build-i18n.xml:463: Problem: failed to create task or type if Cause: The name is undefined. Action: Check the spelling. Action: Check that any custom tasks/types have been declared. Action: Check that any / declarations have taken place. Total time: 19 seconds * * ERROR: sci-chemistry/jmol-11.7.19 failed. * Call stack: * ebuild.sh, line 49: Called src_compile * environment, line 4397: Called eant '-Dlibjars.uptodate=true' 'main' * environment, line 1042: Called die * The specific snippet of code: * ant ${antflags} "${@}" || die "eant failed" * The die message: * eant failed * * If you need support, post the topmost build error, and the call stack if relevant. * A complete build log is located at '/home/portage/sci-chemistry/jmol-11.7.19/temp/build.log'. * The ebuild environment file is located at '/home/portage/sci-chemistry/jmol-11.7.19/temp/environment'. * This ebuild is from an overlay named 'cross': '/usr/local/portage/' * !!! When you file a bug report, please include the following information: GENTOO_VM=sun-jdk-1.6 CLASSPATH="" JAVA_HOME="/opt/sun-jdk-1.6.0.16" JAVACFLAGS="-source 1.4 -target 1.4" COMPILER="javac" and of course, the output of emerge --info