Bug 949271 – sci-chemistry/gromacs-2025_rc - [texlive] [gcc-15] [ffmpeg] sandbox issue

• Status: RESOLVED FIXED
• Product: Gentoo Linux

[Description Toralf Förster 2025-02-04 10:11:49 UTC]

==> /var/tmp/portage/sci-chemistry/gromacs-2025_rc/temp/sandbox.log <==
VERSION 1.0
FORMAT: F - Function called
FORMAT: S - Access Status
FORMAT: P - Path as passed to function
FORMAT: A - Absolute Path (not canonical)
FORMAT: R - Canonical Path
FORMAT: C - Command Line

F: open_wr
S: deny
P: /proc/mtrr
A: /proc/mtrr
R: /proc/mtrr
C: /var/tmp/portage/sci-chemistry/gromacs-2025_rc/work/gromacs-2025_rc_float/bin/gmx -quiet help -export completion 

F: open_wr
S: deny
P: /proc/mtrr
A: /proc/mtrr
R: /proc/mtrr

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 23.0_no_multilib_hardened_systemd-20250202-102502

  UNMASKED:

    Requested by sam
  #~media-video/ffmpeg-7.0.2
  =media-video/ffmpeg-7*

    
  <sys-devel/gcc-15.0.9999:15

    
  >=app-text/dvisvgm-2024
  >=app-text/ps2pkm-1.8_p20240311
  >=app-text/texlive-2024
  >=app-text/texlive-core-2024
  >=dev-libs/kpathsea-6.4.0
  >=dev-libs/ptexenc-1.4.6
  dev-python/latexrestricted
  >=dev-tex/biber-2.20
  >=dev-tex/biblatex-3.20
  >=dev-tex/bibtexu-3.72_p20240311
  >=dev-tex/glossaries-4.55
  dev-tex/latex2pydata
  >=dev-tex/latexmk-4.85
  >=dev-tex/minted-3.4.0
  >=dev-tex/tex4ht-20240311
  >=dev-texlive/texlive-basic-2024
  >=dev-texlive/texlive-bibtexextra-2024
  >=dev-texlive/texlive-binextra-2024
  >=dev-texlive/texlive-context-2024
  >=dev-texlive/texlive-fontsextra-2024
  >=dev-texlive/texlive-fontsrecommended-2024
  >=dev-texlive/texlive-fontutils-2024
  >=dev-texlive/texlive-formatsextra-2024
  >=dev-texlive/texlive-games-2024
  >=dev-texlive/texlive-humanities-2024
  >=dev-texlive/texlive-langarabic-2024
  >=dev-texlive/texlive-langchinese-2024
  >=dev-texlive/texlive-langcjk-2024
  >=dev-texlive/texlive-langcyrillic-2024
  >=dev-texlive/texlive-langczechslovak-2024
  >=dev-texlive/texlive-langenglish-2024
  >=dev-texlive/texlive-langeuropean-2024
  >=dev-texlive/texlive-langfrench-2024
  >=dev-texlive/texlive-langgerman-2024
  >=dev-texlive/texlive-langgreek-2024
  >=dev-texlive/texlive-langitalian-2024
  >=dev-texlive/texlive-langjapanese-2024
  >=dev-texlive/texlive-langkorean-2024
  >=dev-texlive/texlive-langother-2024
  >=dev-texlive/texlive-langpolish-2024
  >=dev-texlive/texlive-langportuguese-2024
  >=dev-texlive/texlive-langspanish-2024
  >=dev-texlive/texlive-latex-2024
  >=dev-texlive/texlive-latexextra-2024
  >=dev-texlive/texlive-latexrecommended-2024
  >=dev-texlive/texlive-luatex-2024
  >=dev-texlive/texlive-mathscience-2024
  >=dev-texlive/texlive-metapost-2024
  >=dev-texlive/texlive-music-2024
  >=dev-texlive/texlive-pictures-2024
  >=dev-texlive/texlive-plaingeneric-2024
  >=dev-texlive/texlive-pstricks-2024
  >=dev-texlive/texlive-publishers-2024
  >=dev-texlive/texlive-xetex-2024

  The attached etc.portage.tar.xz has all details.
  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-15 *
clang version 19.1.7
llvm-config: 19.1.7
Python 3.12.8
go version go1.23.5 linux/amd64
  [1]   php8.3 *
Available Ruby profiles:
  [1]   ruby32 (with Rubygems)
  [2]   ruby33 (with Rubygems)
  [3]   ruby34 (with Rubygems) *
Available Rust versions:
  [1]   rust-bin-1.84.0 *
The following VMs are available for generation-2:
*)	Eclipse Temurin JDK 21.0.6_p7 [openjdk-bin-21]
Available Java Virtual Machines:
  [1]   openjdk-bin-21  system-vm


  HEAD of ::gentoo
commit 24f6f88bc7d3b4563ae0c0623022dcac6cb29b4c
Author: Repository mirror & CI <[e-mail]>
Date:   Mon Feb 3 20:48:22 2025 +0000

    2025-02-03 20:48:22 UTC

emerge -qpvO =sci-chemistry/gromacs-2025_rc
[ebuild  N    ] sci-chemistry/gromacs-2025_rc  USE="blas custom-cflags doc fftw gmxapi gmxapi-legacy hwloc offensive opencl openmp single-precision threads tng -build-manual -clang -clang-cuda -cuda -double-precision -lapack -mkl -mpi -nnpot (-python) -test" CPU_FLAGS_X86="avx avx2 sse2 sse4_1 -avx512f -fma4" PYTHON_SINGLE_TARGET="python3_12 -python3_10 -python3_11"

[Comment 1 Toralf Förster 2025-02-04 10:11:50 UTC]

Created attachment 918144 [details]
emerge-info.txt

[Comment 2 Toralf Förster 2025-02-04 10:11:52 UTC]

Created attachment 918145 [details]
CMakeCache.txt

[Comment 3 Toralf Förster 2025-02-04 10:11:53 UTC]

Created attachment 918146 [details]
emerge-history.txt

[Comment 4 Toralf Förster 2025-02-04 10:11:53 UTC]

Created attachment 918147 [details]
etc.clang.tar.xz

[Comment 5 Toralf Förster 2025-02-04 10:11:54 UTC]

Created attachment 918148 [details]
etc.portage.tar.xz

[Comment 6 Toralf Förster 2025-02-04 10:11:56 UTC]

Created attachment 918149 [details]
logs.tar.xz

[Comment 7 Toralf Förster 2025-02-04 10:11:57 UTC]

Created attachment 918150 [details]
qlist-info.txt

[Comment 8 Toralf Förster 2025-02-04 10:11:58 UTC]

Created attachment 918151 [details]
sandbox.log

[Comment 9 Toralf Förster 2025-02-04 10:11:59 UTC]

Created attachment 918152 [details]
sci-chemistry:gromacs-2025_rc:20250203-233702.log.xz

[Comment 10 Alexey Shvetsov 2025-02-24 10:32:36 UTC]

Should be fixed by 2025.0