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Bug 943554 - dev-python/scikit-learn-1.5.2 - [ncurses-6.5] [gcc-15] x86_64-pc-linux-gnu-gcc: fatal error: cannot read spec file libgomp.spec: No such file or directory
Summary: dev-python/scikit-learn-1.5.2 - [ncurses-6.5] [gcc-15] x86_64-pc-linux-gnu-gc...
Status: CONFIRMED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo Science Related Packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2024-11-15 18:56 UTC by Toralf Förster
Modified: 2024-11-15 18:56 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge-info.txt (emerge-info.txt,18.79 KB, text/plain)
2024-11-15 18:56 UTC, Toralf Förster
Details
dev-python:scikit-learn-1.5.2:20241114-233443.log (dev-python:scikit-learn-1.5.2:20241114-233443.log,156.86 KB, text/plain)
2024-11-15 18:56 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,71.75 KB, text/plain)
2024-11-15 18:56 UTC, Toralf Förster
Details
environment (environment,172.20 KB, text/plain)
2024-11-15 18:56 UTC, Toralf Förster
Details
etc.clang.tar.xz (etc.clang.tar.xz,1.20 KB, application/x-xz)
2024-11-15 18:56 UTC, Toralf Förster
Details
etc.portage.tar.xz (etc.portage.tar.xz,13.91 KB, application/x-xz)
2024-11-15 18:56 UTC, Toralf Förster
Details
logs.tar.xz (logs.tar.xz,6.45 KB, application/x-xz)
2024-11-15 18:56 UTC, Toralf Förster
Details
qlist-info.txt (qlist-info.txt,177.12 KB, text/plain)
2024-11-15 18:56 UTC, Toralf Förster
Details
temp.tar.xz (temp.tar.xz,44.69 KB, application/x-xz)
2024-11-15 18:56 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2024-11-15 18:56:01 UTC
too long lines were shrinked:

[180/249] x86_64-pc-linux-gnu-gcc  -o sklearn/_isotonic.cpython-312-x86_64-linux-gnu.so sklearn/_isotonic.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sklearn__isotonic.pyx.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -O2 -pipe -march=native -fno-diagnostics-color -Wl,-O1 -
[181/249] x86_64-pc-linux-gnu-gcc -Isklearn/tree/_utils.cpython-312-x86_64-linux-gnu.so.p -Isklearn/tree -I../scikit-learn-1.5.2/sklearn/tree -I../../../../../../../usr/lib/python3.12/site-packages/numpy/_core/include -Isklearn -Isklearn/utils -I/usr/include/python3.12 -fvisibility=hidden -fdiagnost
[182/249] x86_64-pc-linux-gnu-gcc  -o sklearn/__check_build/_check_build.cpython-312-x86_64-linux-gnu.so sklearn/__check_build/_check_build.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sklearn___check_build__check_build.pyx.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -O2 -
[183/249] x86_64-pc-linux-gnu-gcc  -o sklearn/_loss/_loss.cpython-312-x86_64-linux-gnu.so sklearn/_loss/_loss.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sklearn__loss__loss.pyx.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -O2 -pipe -march=native -fno-diagnostics-color -Wl
FAILED: sklearn/_loss/_loss.cpython-312-x86_64-linux-gnu.so 
x86_64-pc-linux-gnu-gcc  -o sklearn/_loss/_loss.cpython-312-x86_64-linux-gnu.so sklearn/_loss/_loss.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sklearn__loss__loss.pyx.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -O2 -pipe -march=native -fno-diagnostics-color -Wl,-O1 -Wl,-
x86_64-pc-linux-gnu-gcc: fatal error: cannot read spec file libgomp.spec: No such file or directory
compilation terminated.
[184/249] x86_64-pc-linux-gnu-gcc  -o sklearn/utils/sparsefuncs_fast.cpython-312-x86_64-linux-gnu.so sklearn/utils/sparsefuncs_fast.cpython-312-x86_64-linux-gnu.so.p/meson-generated_sklearn_utils_sparsefuncs_fast.pyx.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -O2 -pipe -march=

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 23.0_desktop_plasma_systemd-20241112-111005

  UNMASKED:
  <sys-devel/gcc-15.0.9999:15
    Issues involving opaque types / incomplete typedefs should block bug 930805
  >=sys-libs/ncurses-6.5

  The attached etc.portage.tar.xz has all details.
  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-15 *
clang version 18.1.8
llvm-config: 19.1.3
Python 3.12.7
go version go1.23.2 linux/amd64
Available Ruby profiles:
  [1]   ruby32 (with Rubygems)
  [2]   ruby33 (with Rubygems) *
Available Rust versions:
  [1]   rust-bin-1.82.0 *
The following VMs are available for generation-2:
*)	Eclipse Temurin JDK 21.0.5_p11 [openjdk-bin-21]
Available Java Virtual Machines:
  [1]   openjdk-bin-21  system-vm


  HEAD of ::gentoo
commit 29a209b9b92733f3993f24f2cc34e4a98d7f38d3
Author: Repository mirror & CI <repomirrorci@gentoo.org>
Date:   Thu Nov 14 22:33:27 2024 +0000

    2024-11-14 22:33:27 UTC

emerge -qpvO =dev-python/scikit-learn-1.5.2
[ebuild  N    ] dev-python/scikit-learn-1.5.2  USE="examples -debug -test" PYTHON_TARGETS="python3_12 -python3_10 -python3_11 -python3_13"
Comment 1 Toralf Förster gentoo-dev 2024-11-15 18:56:02 UTC
Created attachment 908748 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2024-11-15 18:56:04 UTC
Created attachment 908749 [details]
dev-python:scikit-learn-1.5.2:20241114-233443.log
Comment 3 Toralf Förster gentoo-dev 2024-11-15 18:56:05 UTC
Created attachment 908750 [details]
emerge-history.txt
Comment 4 Toralf Förster gentoo-dev 2024-11-15 18:56:06 UTC
Created attachment 908751 [details]
environment
Comment 5 Toralf Förster gentoo-dev 2024-11-15 18:56:07 UTC
Created attachment 908752 [details]
etc.clang.tar.xz
Comment 6 Toralf Förster gentoo-dev 2024-11-15 18:56:08 UTC
Created attachment 908753 [details]
etc.portage.tar.xz
Comment 7 Toralf Förster gentoo-dev 2024-11-15 18:56:09 UTC
Created attachment 908754 [details]
logs.tar.xz
Comment 8 Toralf Förster gentoo-dev 2024-11-15 18:56:10 UTC
Created attachment 908755 [details]
qlist-info.txt
Comment 9 Toralf Förster gentoo-dev 2024-11-15 18:56:12 UTC
Created attachment 908756 [details]
temp.tar.xz