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Bug 943502 - dev-lang/R-4.4.2 installs shared libraries that lack a SONAME
Summary: dev-lang/R-4.4.2 installs shared libraries that lack a SONAME
Status: CONFIRMED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo Science Mathematics related packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2024-11-14 10:39 UTC by Agostino Sarubbo
Modified: 2025-03-06 01:31 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,585.52 KB, text/plain)
2024-11-14 10:39 UTC, Agostino Sarubbo
Details

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Description Agostino Sarubbo gentoo-dev 2024-11-14 10:39:56 UTC
https://blogs.gentoo.org/ago/2020/07/04/gentoo-tinderbox/

Issue: dev-lang/R-4.4.2 installs shared libraries that lack a SONAME.
Discovered on: amd64 (internal ref: ci)

Info about the issue:
https://wiki.gentoo.org/wiki/Project:Tinderbox/Common_Issues_Helper#QA0012
Comment 1 Agostino Sarubbo gentoo-dev 2024-11-14 10:39:58 UTC
Created attachment 908698 [details]
build.log

build log and emerge --info
Comment 2 Alfred Wingate 2025-03-05 23:39:41 UTC
Upstream and FreeBSD had discussion on this in 2016. Where the end result was that upstream didn't see the necessity for this.

https://stat.ethz.ch/pipermail/r-devel/2016-November/073397.html

So in light of that this appears to a possible bug in that libRmath.so is installed outside /usr/lib64/R/lib/? (Which might be a difference in behaviour with 4.4.2).
Comment 3 Alfred Wingate 2025-03-06 01:31:58 UTC
So other distributions, namely Debian and Fedora both split libRmath from the base R package. In regard to the soname its either a downstream made up one like with Debian or none at all like with Fedora.

https://salsa.debian.org/edd/r-base/-/blob/ab40d22a48fa679e2bfc1fc7f98de287a4aa19e5/debian/rules#L18

(In reply to Alfred Wingate from comment #2)
> So in light of that this appears to a possible bug in that libRmath.so is
> installed outside /usr/lib64/R/lib/? (Which might be a difference in
> behaviour with 4.4.2).

This is expected behaviour when comparing to previous version and how its installed in other distributions.