make[3]: Leaving directory '/var/tmp/portage/sci-biology/vcftools-0.1.16/work/vcftools-0.1.16/src/cpp' make[3]: Entering directory '/var/tmp/portage/sci-biology/vcftools-0.1.16/work/vcftools-0.1.16/src/cpp' clang++ -DHAVE_CONFIG_H -I. -I../.. -O2 -pipe -march=native -fno-diagnostics-color -c -o vcftools-parameters.o `test -f 'parameters.cpp' || echo './'`parameters.cpp make[3]: Leaving directory '/var/tmp/portage/sci-biology/vcftools-0.1.16/work/vcftools-0.1.16/src/cpp' make[3]: Entering directory '/var/tmp/portage/sci-biology/vcftools-0.1.16/work/vcftools-0.1.16/src/cpp' clang++ -DHAVE_CONFIG_H -I. -I../.. -O2 -pipe -march=native -fno-diagnostics-color -c -o vcftools-variant_file_filters.o `test -f 'variant_file_filters.cpp' || echo './'`variant_file_filters.cpp variant_file_filters.cpp:129:2: error: use of undeclared identifier 'random_shuffle' 129 | random_shuffle(keep_index.begin(), keep_index.end()); // Get a random order | ^ ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 23.0_llvm-20241010-060009 The attached etc.portage.tar.xz has all details. ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-13 * clang/llvm (if any): clang version 19.1.1+libcxx Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/19/bin Configuration file: /etc/clang/x86_64-pc-linux-gnu-clang.cfg /usr/lib/llvm/19 19.1.1+libcxx Python 3.12.7 Available Ruby profiles: [1] ruby32 (with Rubygems) [2] ruby33 (with Rubygems) * Available Rust versions: [1] rust-bin-1.81.0 * The following VMs are available for generation-2: 1) Eclipse Temurin JDK 11.0.24_p8 [openjdk-bin-11] 2) Eclipse Temurin JDK 17.0.12_p7 [openjdk-bin-17] *) Eclipse Temurin JDK 21.0.4_p7 [openjdk-bin-21] 4) Eclipse Temurin JDK 8.422_p05 [openjdk-bin-8] Available Java Virtual Machines: [1] openjdk-bin-8 [2] openjdk-bin-11 [3] openjdk-bin-17 [4] openjdk-bin-21 system-vm The Glorious Glasgow Haskell Compilation System, version 9.2.8 php cli (if any): [1] php8.3 * go version go1.23.1 linux/amd64 HEAD of ::gentoo commit ead3b9984f7c8590c1ee7f4695ea84ef3d34d9bf Author: Repository mirror & CI <repomirrorci@gentoo.org> Date: Sun Oct 13 17:48:26 2024 +0000 2024-10-13 17:48:26 UTC emerge -qpvO =sci-biology/vcftools-0.1.16 [ebuild N ] sci-biology/vcftools-0.1.16 USE="-lapack"
Created attachment 905706 [details] emerge-info.txt
Created attachment 905707 [details] emerge-history.txt
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Created attachment 905710 [details] etc.portage.tar.xz
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Created attachment 905713 [details] sci-biology:vcftools-0.1.16:20241013-191338.log
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Created attachment 905715 [details] var.tmp.clang.tar.xz
